Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq30937 379 5e-103 seq10806 150 5e-34 seq31919 140 8e-31 seq3329 138 3e-30 seq32717 134 4e-29 seq7528 102 2e-19 seq30660 95.1 3e-17 seq4996 84.2 6e-14 seq30002 82.4 2e-13 >seq30937 Length=4778 Score = 379 bits (420), Expect = 5e-103 Identities = 322/394 (82%), Gaps = 8/394 (2%) Strand=Plus/Minus Query 21 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTA 80 ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct 4778 CGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATTA 4719 Query 81 CTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAAC 140 |||||||||||||| | | ||| || | |||| || ||||||||||||||||||||| Sbjct 4718 CTGGGCGTAAAGCGAGTGTAGGTGGCTCATTAAGTCACATGTGAAATCCCCGGGCTTAAC 4659 Query 141 CTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCAGAGGGGGGTGGAATTCCAC 199 ||||||| ||||| || |||| | ||||| | ||| |||||| || |||||||| Sbjct 4658 CTGGGAACTGCATGTGATACTGGTGGTGCTAGAATATGTGAGAGGGAAGTAGAATTCCAG 4599 Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||||||| |||||||||||||| || |||||||| ||| |||||||||||||| ||||| Sbjct 4598 GTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGCAGCTTCCTGG 4539 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 |||| | |||| || | |||||||||||| |||||||||||||||||||||||||| Sbjct 4538 CATAATATTGACACTGAGATTCGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTA 4479 Query 320 GTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACTT----CCTTGGTAACGT 375 ||||||||| |||||||| || ||||| ||||||| | ||| | || || || Sbjct 4478 GTCCACGCCGTAAACGATGTCTACTAGCCGTTGGGG---TCCTTGAGACTTTAGTGGCGC 4422 Query 376 AGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || ||||||| |||| ||||||||||||| ||| Sbjct 4421 AGTTAACGCGATAAGTAGACCGCCTGGGGAGTAC 4388 >seq10806 Length=1062488 Score = 150 bits (166), Expect = 5e-34 Identities = 235/335 (70%), Gaps = 1/335 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || ||| ||||||||| ||| ||||| ||||||||| |||||||| || ||| ||| Sbjct 1038023 TATCTGGGGAATAAGCATCGGTTAACTCTGTGCCAGCAAGCGCGGTAAGACAAAGGATGC 1037964 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||| ||| |||||| | ||||||||||| || | | | || | | |||| | || Sbjct 1037963 AAGCATTATCCGGAATGATTGGGCGTAAAG-GTCTGTAAGTGGCTTTTTAAGTTCGCCGT 1037905 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 1037904 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 1037845 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| ||||||||| |||| || | ||||||||| | Sbjct 1037844 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCATAGAGATCGAAAAGAACACCAACGA 1037785 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| | |||||| || | |||||||| ||||||| || | Sbjct 1037784 CGAAAGCACTCTGCTGGGCCGATACTGACACTGAAAGACGAAAGCTAGGGGAGCGAATGG 1037725 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| |||||| ||||||| ||| |||| ||| Sbjct 1037724 GATTACATACCCCAGTAGTCCTAGCCGTAAATGAT 1037690 >seq31919 Length=2315549 Score = 140 bits (154), Expect = 8e-31 Identities = 229/329 (70%), Gaps = 2/329 (1%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| ||||||||| ||||||||||||||||||| || ||| |||||| |||| Sbjct 287484 GAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGTGTTA 287543 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||| | |||||||||||||| | | || | |||| | ||| ||||| | Sbjct 287544 TCTAGAATGATTGGGCGTAAAGCGTCTGTGTGTGGCATTTTAAGTTTGTTGTCAAATCTC 287603 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||||||||| ||| ||| | | ||| | || |||| | || | | | Sbjct 287604 AGGGCTTAACCTTGGATAGGCAGTGGAAACTACCAAGCTGGAGTACGGTAGGAGCAGAGG 287663 Query 191 GAATTCCACGTGT--AGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGG 248 ||||| | |||| || || |||||||||||| || ||||| ||| ||| || | Sbjct 287664 GAATTTCCGGTGTGGAGTAGGGAAATGCGTAGAGATCGAACAGAACATCAACGGCAAAAG 287723 Query 249 CAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 || | |||| | |||||||| | | |||||||| ||||||| || ||||||| Sbjct 287724 CACTCTGCTGGACTGACACTGACACAGAGAGACGAAAGCTAGGGGAGCGAATGGGATTAG 287783 Query 309 ATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||| | ||| ||| ||||| || Sbjct 287784 ATACCCCATTTGTCTTAGCCGTAAACAAT 287812 >seq3329 Length=248595 Score = 138 bits (152), Expect = 3e-30 Identities = 280/405 (69%), Gaps = 18/405 (4%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| || ||||| ||| || || | | ||| | ||| |||||| |||| Sbjct 177546 GAATAAGCATTGGTTAACTCTGTGTGAGTAGTTGTGATAAGATAAAGGATGCAAGTGTTA 177605 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||||| | |||||||||||||| ||| |||| | |||| | ||| ||||||| Sbjct 177606 TCCGGAATGATTGGGCGTAAAGCGTCTATAGGTGGTTTTTTAAGTTTGCTGTCAAATCCC 177665 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGT--GTGT-CAGAGGGGG 187 ||||| ||||| ||| | | |||| || || | ||| | || ||| |||| Sbjct 177666 AGGGCTCAACCTTGGACAGG---TGGTGAAA--ACTACCA-AGTTGGAGTACAGTAGGGG 177719 Query 188 --GTGGAATTCCACG-TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCG 244 | |||| | || || ||| |||||||||||||| || | |||||||||||||| Sbjct 177720 TAGAGGAAATTTTCGGTGGAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCAATGGCG 177779 Query 245 AAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGA 304 || ||| | ||| |||||||| || | |||||||| ||||| | || ||| Sbjct 177780 AAAGCACTCTGTTGGCCCGACACTGACACTGAGAGACGAAAGCTAGGGGAACGAATGGGA 177839 Query 305 TTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTG--TTGGGGATTTACT 362 |||||||||| ||||||| ||| |||||||| ||||| | || | || || Sbjct 177840 TTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTATGTGTATCAAC- 177898 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGA 405 || || | ||||||||||||| |||| ||||||||||| Sbjct 177899 -CCGTGCAATGTTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGA 177942 >seq32717 Length=16798 Score = 134 bits (148), Expect = 4e-29 Identities = 273/403 (68%), Gaps = 8/403 (2%) Strand=Plus/Minus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||| | ||||||| |||||||||| || ||||| || ||| ||||||| ||| Sbjct 13221 GAATAAGCATCAGCTAACTTTGTGCCAGCAGTCGTGGTAAGACAGAGGATGCAAGCATTA 13162 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 | ||||| | |||| ||||||| | | ||| || | | ||| | | ||||||| Sbjct 13161 TTTGGAATAATTGGGTGTAAAGCATTTGTAGGTGGCTTTTTAATTTCGTCATCAAATCCC 13102 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 |||| ||| | ||| || | | ||| | ||||||| | ||| || | | Sbjct 13101 AAGGCTCAACTTTGGACAGGCGGTGGAAACTACCAAGCTAGAGTACGGCAGGGGCAGAGG 13042 Query 191 GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCA 250 ||||| | ||| || ||||||||| |||| || | | ||||||||| || ||| | | Sbjct 13041 GAATTTCCGGTGGAGTGGTGAAATGCATAGAGATCGGAAAGAACACCAACGGTGAAAGTA 12982 Query 251 GCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 310 | ||||| | |||||| || | | || ||| ||||||| || ||||||||| Sbjct 12981 CTCTGCTGGGCCGATACTGACACTGAGAAATGATAGCTAGGGGAGCGAATGGGATTAGAT 12922 Query 311 ACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGT--TGGGGATTTAC---TTCC 365 |||| | | ||| || ||||| || ||||| ||| || | || || | | Sbjct 12921 ACCCCAGCAATCCTAGCGGTAAACAATGGATACTAGGTGTTGTGCGTATCGACCCGTGCA 12862 Query 366 TTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 ||| | ||||||||| ||| |||| || |||||||| || Sbjct 12861 TTGCT---GTAGCTAACACGTTAAGTATCCCACCTGGGGAGTA 12822 >seq7528 Length=2495505 Score = 102 bits (112), Expect = 2e-19 Identities = 236/352 (67%), Gaps = 3/352 (1%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| | || ||||||||| | |||||| |||| || || ||| |||| | || || Sbjct 1571269 ATATCCGAGGAATAAGCATCAACTAACTTTGTGCTAGTAGTCGCAGTAAGTCAGAGAATG 1571210 Query 62 CAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTG 121 ||||| ||| | | ||| | || |||||||| || | ||| || | | |||| | Sbjct 1571209 CAAGCATTATTTGAAATGATTGTGCGTAAAGTGTATGTAGGTGGCTTTTTAAGTTCGTCA 1571150 Query 122 TGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGA-CTAGAGTGTGTCA 180 | |||||| ||||| |||| ||| | | || || | | || |||| | Sbjct 1571149 TCAAATCCA-GGGCTCAACCCTGGA-TAGATGATGGAACCTACCAAGCTGGAGTACAATA 1571092 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 |||| | |||||| | ||| ||||||||||| |||||| || | | ||||||||| Sbjct 1571091 GAGGTAGAGGGAATTTCCAGTGGAGCAGTGAAATACGTAGAGATTGGAAAGAACACCAAC 1571032 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 | | || ||| | || || | |||||| | | |||||||| ||||||| || Sbjct 1571031 GACAAAAGCACTCTGCTAGGTCGAAACTGACATTGAGAGACGAAAGCTAGGGGAGCGAAT 1570972 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTG 352 ||||||||||||| |||||| | |||||||| ||||| ||||| Sbjct 1570971 GGGATTAGATACCCCAATAGTCCTAACTGTAAACGATGGATACTAGGTGTTG 1570920 >seq30660 Length=3032906 Score = 95.1 bits (104), Expect = 3e-17 Identities = 190/282 (67%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 56 AGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGA 115 ||| ||||||| ||| ||||| |||||||||||||| | ||| || | | |||| Sbjct 2561020 AGGATGCAAGCATTATCGGGAATGGTTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGT 2561079 Query 116 CAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTG 175 | || ||||||| ||||| |||| ||| || | | ||| | || |||| Sbjct 2561080 TCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTA 2561139 Query 176 TGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACA 235 | || || | | |||| | ||| | | ||||||||| |||| || | ||||| Sbjct 2561140 CGATAGGGGCAGAGGAAATTTCTGGTGGAACGGTGAAATGCATAGAGATCGAAAAGAACA 2561199 Query 236 CCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAG 295 |||| |||| || | ||||| ||| |||| | | |||||||| |||||| Sbjct 2561200 CCAACAACGAAAACACTCTGCTGGGCCGACATTGACACCAAGAGACGAAAGCTAGGGGAG 2561259 Query 296 CAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 | || ||||||||||||| ||||||| | | |||||||| Sbjct 2561260 CGAATGGGATTAGATACCCCAGTAGTCCTAGTCGTAAACGAT 2561301 >seq4996 Length=541 Score = 84.2 bits (92), Expect = 6e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 59 TACCTGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTG 1 >seq30002 Length=1098084 Score = 82.4 bits (90), Expect = 2e-13 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 190 GGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||||| | ||| | | |||||||||||||| || | | ||||||||| |||||| || Sbjct 520253 GGAATTTCTGGTGGAACGGTGAAATGCGTAGAGATTGGAAAGAACACCAACGGCGAAAGC 520312 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | ||||| |||||||| | | |||||||| |||||||||| ||||||| Sbjct 520313 ACTTTGCTGGGCCGACACTGACACCGAGAGACGAAAGCTAGGGGAGCAAATGAGATTAGA 520372 Query 310 TACCC 314 ||||| Sbjct 520373 TACCC 520377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289172239680