Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq11981 93.3 4e-17 seq13785 86.0 7e-15 seq32717 80.6 3e-13 seq7750 78.8 1e-12 seq30937 75.2 1e-11 >seq11981 Length=1035870 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 846906 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 846963 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 846964 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 847013 >seq13785 Length=113992 Score = 86.0 bits (94), Expect = 7e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||||| || | || || ||||||| |||||||||| ||| || | | ||| Sbjct 107440 CAAACCAACACAGGTGAACAAGTAGATTATACTAGGGCGCTTGAGAGAACCATGTTGAAG 107499 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT 123 ||||| |||||| |||||||||||||| |||| || |||| Sbjct 107500 GAACTCGGCAAAATGACCCTGTAACTTTGGGAGAAGGGGT 107539 >seq32717 Length=16798 Score = 80.6 bits (88), Expect = 3e-13 Identities = 85/110 (77%), Gaps = 4/110 (4%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| | ||| | |||||||||||||||| || |||| ||| | || ||| || Sbjct 2593 TAAGGAACTTGAAAAATAG-CCCTGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGG 2535 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || || || |||| || ||| |||||||| |||||||||||| || Sbjct 2534 GT---CGTAGTGACTAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 2488 >seq7750 Length=2489100 Score = 78.8 bits (86), Expect = 1e-12 Identities = 84/109 (77%), Gaps = 3/109 (3%) Strand=Plus/Minus Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| ||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 2361146 AAGGAACTCAGCAAAATAGCCC-GTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAAG-- 2361090 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 ||| ||||| || | | || ||| |||||||| |||||||||||| || Sbjct 2361089 AGGTCGCAGTGACCAAGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 2361041 >seq30937 Length=4778 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || |||| |||||||||||| ||| | | |||| Sbjct 1306 AAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCTGCTGAAGG 1247 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||| || Sbjct 1246 AACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 1213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531029307180