Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq30937 187 2e-45 seq11981 87.8 2e-15 seq21963 78.8 9e-13 seq21046 78.8 9e-13 >seq30937 Length=4778 Score = 187 bits (206), Expect = 2e-45 Identities = 115/123 (93%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 36 AAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTC 95 ||||| || | |||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1177 AAGCTATTGGCAGTCGCAGATACCAGGCCGCTGCAACTGTTTATTAAAAACACAGCACTC 1118 Query 96 TGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTG 155 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1117 TGCAAACACGAAAGTGGACGTATAGGGTGTGATGCCTGCCCGGTGCTGGAAGGTTAATTG 1058 Query 156 ATG 158 ||| Sbjct 1057 ATG 1055 >seq11981 Length=1035870 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 846966 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 847025 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 847026 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 847071 >seq21963 Length=863573 Score = 78.8 bits (86), Expect = 9e-13 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || | Sbjct 272887 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACAAT 272946 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAG 147 || ||| || |||| |||||||||||| ||||| Sbjct 272947 GTTTAGAGTCTGACACCTGCCCGGTGCTGGAAG 272979 >seq21046 Length=758784 Score = 78.8 bits (86), Expect = 9e-13 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 || |||||| |||||||||||| |||| ||||| |||||||| || ||| | || Sbjct 35323 ACTAGGCCGGTGCGACTGTTTACCAAAAGCACAGGTCTCTGCAATGTCGTAAGACCATGT 35382 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||| |||||||||||| ||| || ||||| || Sbjct 35383 ATAGGGGCTGACGCCTGCCCAGTGTCGTAAGGTCAA 35418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476646787770