Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq30937 580 3e-163 seq13785 183 8e-44 seq30545 158 3e-36 seq4760 136 1e-29 seq22052 122 2e-25 seq365 118 3e-24 seq32717 113 1e-22 seq11981 111 4e-22 seq21169 109 1e-21 seq7409 102 2e-19 seq31939 93.3 1e-16 seq7561 80.6 7e-13 seq21963 78.8 2e-12 seq21046 78.8 2e-12 seq10304 75.2 3e-11 seq3598 73.4 1e-10 >seq30937 Length=4778 Score = 580 bits (642), Expect = 3e-163 Identities = 387/428 (90%), Gaps = 2/428 (0%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| |||||||| ||||||||||||||| | |||||||||| Sbjct 867 CGCGGGTACACAGCATCTTCACTGCGATTTCGATTTCACTGAGTCTCTGCTGGAGACAGC 926 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 927 GCCGCCATCATTATGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 986 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 987 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 1046 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 1047 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTT 1106 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1107 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTTGCAGCGGCCTGGTATCTGCGACT 1166 Query 301 GGCATGAGC-TTACGGAGCAAGTC-CTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTA 358 | || ||| || ||||| ||| ||||| || | ||| ||||||||||||||||| Sbjct 1167 GCCAATAGCTTTGTAGAGCATGTCTACTCACCATCGGCAGCGTACCTTCTCCCGAAGTTA 1226 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 |||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 1227 CGGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 1286 Query 419 CCAACCAC 426 | ||||| Sbjct 1287 CTGACCAC 1294 >seq13785 Length=113992 Score = 183 bits (202), Expect = 8e-44 Identities = 290/415 (70%), Gaps = 28/415 (7%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 ||| |||||||||||| | || |||||||||| | ||| | |||||||| | || Sbjct 107850 TACTCTGCATCTTCACGGAGAATTCAATTTCATCGGGTCCATGTCGGAGACAGTGGGGCA 107791 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 107790 GTCGTTACACCATTCGTGTAGGTCACTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 107731 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 186 | |||| ||||| ||||| ||||||| ||||||| || | ||||| ||| Sbjct 107730 CAGTTAGAGTTACTGCCGCTGTTTACCAGGGCTTCCATTCAAAGCTT--------ATAA- 107680 Query 187 CCCATCAATT---AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCG 243 | | || || |||||| |||||||||||| |||| || ||||| || || | Sbjct 107679 CACTTCTCTTTCCGACCTTCTAGCACCGGGCAGGTGTCAGACTTTATACATCGTGTTACC 107620 Query 244 TGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGC 303 || | ||||| || ||||||| ||||||||||| | |||||||| | | | | Sbjct 107619 ACTTAGTAGAGTCCTATGTTTTT-GTAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTC 107561 Query 304 ATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363 | | | | || || |||| ||||||||| ||||||| | | Sbjct 107560 CTAATCAAA---AGATAGGAGAGCACC------------CCTTCTCCCAAAGTTACAGGG 107516 Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | ||||||| ||||||||| | ||||||||||||||| | |||| ||||| Sbjct 107515 TCATTTTGCCGAGTTCCTTCAACATGGTTCTCTCAAGCGCCCTAGTATAATCTAC 107461 >seq30545 Length=481101 Score = 158 bits (174), Expect = 3e-36 Identities = 285/418 (68%), Gaps = 28/418 (7%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||| || || ||||||| ||||||| ||| ||| ||| ||| || Sbjct 71876 GCATCTTCACAAACATGTCTATTTCACCGAGTCTCTCTCCGAGGCAGTGCCCAAATCATT 71935 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 | ||| ||| ||| ||| |||||||||| ||||||||||| |||||||||| || ||||| Sbjct 71936 ATGCCTTTCATGCGGGTTGGAACTTACCTGACAAGGAATTGCGCTACCTTAAGA-CGTTA 71994 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTA---GCTAACCC 188 | ||||||| ||||||| |||| ||||||| ||| | | | | || | | | || Sbjct 71995 TAGTTACGGTCGCCGTTCACCGAGGCTTCGGTCATCGGATCCCCTGTCATCTGGTCACTA 72054 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||| |||| ||| |||| | ||| || ||| Sbjct 72055 ACTTCCTTGACCTTCCGGCACTTGGCAGGTGTCAGCCCCCATACATGGTCTTACGACTTT 72114 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| ||||||||| |||||| || | |||| || | ||||| Sbjct 72115 GCGGAGACATGTGTTTTTGGTAAACAATCACCCGAGCCTAGTCACAACGACC------TC 72168 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | |||||| ||||||||||| || || Sbjct 72169 CTTTGTGAGGA-----------------GGCACCTCTTCTCTCGAAGTTACGGGGCTATT 72211 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||| |||||||| ||||| |||| || ||| |||||||| |||| | |||| Sbjct 72212 TTGCTGAGTTCCTTAGAGAGAGTTGTCTCGTGCCCCTAGGTATTCTTTACCTACCCAC 72269 >seq4760 Length=2462692 Score = 136 bits (150), Expect = 1e-29 Identities = 173/238 (73%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||| |||| || ||||||| ||||||||||||||| ||||||||||| |||||||| ||| Sbjct 2260354 ATCATTACACCTTTCGTGCTGGTCGGAACTTACCCAACAAGGAATTTTGCTACCTTGGGA 2260295 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGC 182 ||||||| |||| | || ||| || ||||||||| || ||| | | | || Sbjct 2260294 CCGTTATAGTTATAGTCGTTGTTCACTGGGGCTTCGGTCGTCGGCTCCCATGTCATCAGG 2260235 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 | ||| | || ||||| ||||| ||||| |||| | ||||||| | ||| | Sbjct 2260234 TCACCAACTTCCTTGACCTTTCGGCATTGGGCAAGCGTTAGCTCCTATACATGGTCTTAC 2260175 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 | ||||| ||| |||||||||| ||||||||| | ||||||| || ||||| Sbjct 2260174 GACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCACCCGAGCCTGGTCACTACGACC 2260117 >seq22052 Length=270253 Score = 122 bits (134), Expect = 2e-25 Identities = 96/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||||||| ||||||| ||| || ||| Sbjct 52148 GCATCTTCACAGACATGTCTATTTCACCGAGTCTCTCTCCGAGACAGTGCCCAGATTGTT 52089 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||| |||||||||| || ||||||||| ||||||||||||||||||||||||| Sbjct 52088 ACGCCTTTCGTGCAGGGCGAAACTTACCCAACAAGGAATTTCGCTACCTTAGGAC 52034 >seq365 Length=174009 Score = 118 bits (130), Expect = 3e-24 Identities = 126/166 (76%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 93 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 152 |||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||| | Sbjct 146619 AACTTACCTGACAAGGAATTTCGTTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAT 146560 Query 153 CGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCA 208 |||||||||| | ||| | | | || | ||| | || ||||||||||| Sbjct 146559 CGGGGCTTCGGTTGTCGGCTCCCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCA 146500 Query 209 CCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 | |||||||||||| ||| |||| | ||| || ||||| ||| Sbjct 146499 CTGGGCAGGCGTCAGTCCCCATACATGATCTTACGACTTTGCGGAG 146454 >seq32717 Length=16798 Score = 113 bits (124), Expect = 1e-22 Identities = 168/238 (71%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 |||||||| || ||| ||| ||| | ||||||||||| ||||||||| |||||||||||| Sbjct 2298 ATCGTTACACCTTTCATGCGGGTTGAAACTTACCCGATAAGGAATTTTGCTACCTTAGGA 2357 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGC 182 |||||| ||||| | ||| || |||| ||| || ||| | | | || Sbjct 2358 TCGTTATAATTACGATTTCTGTTCACTAGGGCCTCGGTCGTTGGCTCCCCTGTCATCAGG 2417 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 | ||| | || |||||| ||||| ||||| || ||| ||| |||| | ||| | Sbjct 2418 TCACCAACTTCCTTGACCTTCGGGCACTGGGCAAGCATCAGCCCCCATACATGGTCTTAC 2477 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 | |||| || |||||||||| ||||||||||| ||||| || || ||||| Sbjct 2478 GACTTTGAGAAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTAGTCACTACGACC 2535 >seq11981 Length=1035870 Score = 111 bits (122), Expect = 4e-22 Identities = 161/232 (69%), Gaps = 23/232 (10%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || |||||||||||| |||||||||||| ||| |||| | ||| || ||||| ||| Sbjct 847071 TTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAG 847012 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACG 314 |||||||||| ||||||||||| |||||||| || ||||| ||| Sbjct 847011 ACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CCCTTTGT 846958 Query 315 GAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCT 374 ||| | ||| | ||||||||||||||||||| || ||||||| Sbjct 846957 GAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCG 846915 Query 375 AGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||| ||||| |||| || || ||||||||||||| | |||| Sbjct 846914 AGTTCCTTAGAGAGAGTTGTCTCGCGCCTCTAGGTATTCTCTACCTACCCAC 846863 >seq21169 Length=217455 Score = 109 bits (120), Expect = 1e-21 Identities = 89/108 (82%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 52 GGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAAT 111 |||||||||| || || |||| |||||||||||||||| ||||| ||||| ||||| Sbjct 89508 GGAGACAGCGGGGCAGTCATTACACCATTCGTGCAGGTCGCTACTTATGCGACACGGAAT 89567 Query 112 TTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCT 159 ||| |||||||||||| ||| ||||| || | |||||||||||||| Sbjct 89568 TTCACTACCTTAGGACATTTAAAGTTACTGCTGTCGTTTACCGGGGCT 89615 >seq7409 Length=2268560 Score = 102 bits (112), Expect = 2e-19 Identities = 77/91 (85%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||| ||||||| | || || ||||||||||| ||||||| ||| ||| |||||||||| Sbjct 1640190 GCCTTTCGTGCGGATCAAAATTTACCCGACAATGAATTTCACTATCTTTGGACCGTTATA 1640249 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATC 165 |||| |||||||||| |||||| |||||||| Sbjct 1640250 GTTATGGCCGCCGTTCACCGGGACTTCGATC 1640280 >seq31939 Length=7596472 Score = 93.3 bits (102), Expect = 1e-16 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||||||||||||| || || ||||||| ||||||| |||||| || |||| Sbjct 4227227 CTGCATCTTCACAAACATGTCTATTTCACCGAGTCTCTCTCCAAGACAGTACCCAGATCG 4227286 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGC 116 |||| || ||| || |||||||||||||||||||||||||||||| Sbjct 4227287 TTACACCTTTCATGTGGGTCGGAACTTACCCGACAAGGAATTTCGC 4227332 >seq7561 Length=57822 Score = 80.6 bits (88), Expect = 7e-13 Identities = 68/84 (81%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 343 CCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||||||||||||||||| | || ||||||| |||||||| | ||||| |||| || Sbjct 5656 CCTTCTCCCGAAGTTACAGGGCTATTTTGCCAAGTTCCTTACAGAGAGTTGTCTCGCGCC 5597 Query 403 CCTTGGTATTCTCTACCCAACCAC 426 ||| ||||||||||||| | |||| Sbjct 5596 CCTAGGTATTCTCTACCTACCCAC 5573 >seq21963 Length=863573 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 200 CTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTG 259 ||||| |||||||||||| |||| || ||| || | || | || ||||||| ||| Sbjct 272979 CTTCCAGCACCGGGCAGGTGTCAGACTCTAAACATTGTGTTACCACTTAGCAGAGTCCTG 272920 Query 260 TGTTTTTAATAAACAGTCGCAGCGGCCTGGTAT 292 |||||||||||||||||||| | |||||||| Sbjct 272919 TGTTTTTAATAAACAGTCGCTACCCCCTGGTAT 272887 >seq21046 Length=758784 Score = 78.8 bits (86), Expect = 2e-12 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 || ||||| || ||| |||||||||||| |||||||| | ||| || |||||||| Sbjct 35418 TTGACCTTACGACACTGGGCAGGCGTCAGCCCCTATACATGGTCTTACGACATTGCAGAG 35359 Query 255 TGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 ||||| |||| |||||||||||| |||||| || Sbjct 35358 ACCTGTGCTTTTGGTAAACAGTCGCACCGGCCTAGT 35323 >seq10304 Length=1623844 Score = 75.2 bits (82), Expect = 3e-11 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 98 ACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGG 157 ||||||||||||||||| ||||||||| || |||| |||| | || ||||| |||||| Sbjct 743282 ACCCGACAAGGAATTTCACTACCTTAGTTCCATTATAGTTATGACCACCGTTCACCGGGA 743341 Query 158 CTTCGATCA 166 ||||| ||| Sbjct 743342 CTTCGGTCA 743350 >seq3598 Length=213465 Score = 73.4 bits (80), Expect = 1e-10 Identities = 93/127 (73%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||| || || | |||||| ||||||| | ||||||| ||| ||| | Sbjct 50437 TGCATCTTCATAGACATGTATATTTCATCGAGTCTCTCTTTGAGACAGTGCCTATATCAT 50378 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 || ||| || ||| |||| || |||| ||| ||||||||||||| ||| || |||| Sbjct 50377 TATGCCTTTTGTGTTAGTCGAAAGTTACTA-ACAGGGAATTTCGCTACTTTAAGATCGTT 50319 Query 132 ATTGTTA 138 | |||| Sbjct 50318 AAAGTTA 50312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260381792640