Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq30937 199 8e-49 seq30545 129 1e-27 seq29658 114 3e-23 seq32717 107 4e-21 seq31257 77.0 6e-12 >seq30937 Length=4778 Score = 199 bits (220), Expect = 8e-49 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| |||||||||||||||||| ||||| ||||||||||||||| | Sbjct 695 GGACAATGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 636 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | ||| | | ||||| || ||||| | | || | ||| ||||||||||| | | Sbjct 635 TACGAAGGTGCGCTCAGAACGGTCGGAAATCGTTCGAAGAGTATAAAGGCAAAAGCGCGC 576 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 || ||||||| |||| |||||| ||||| |||||||| || |||| |||||||| ||| Sbjct 575 TTAACTGCGAGACCCACAAGTCGAGCAGATACGAAAGTAGGTCTTAGTGATCCGGTGGTT 516 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| |||| |||||| ||||||||||| ||| ||||||||| Sbjct 515 CTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 468 >seq30545 Length=481101 Score = 129 bits (142), Expect = 1e-27 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||| ||| |||| | ||||| ||||||| ||||||| || ||||||||||| Sbjct 71687 GGGATAGTCTCAGGTAGATAGTTTCTATGGGGCGTAAGCCTCCCTAAAGGTAACGGAGGC 71628 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||||| || ||| || | | |||||||||||| ||||| Sbjct 71627 GTGCAAAGGTTTCCTCAGGCCAGACGGAGTTTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 71569 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||| ||| | |||| | ||| | | |||| |||||||| |||||||||| | || Sbjct 71568 GCTTGATTGCAAGACCCACCCGTCGATTATGGACAAAAGTCGGTCTTAATGATCTGACGA 71509 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| |||| |||||| | ||||||||| ||| || |||||| Sbjct 71508 TGCCGAGTGGAAGGGCCATCGCTCAATGGATAAAAGTTACTCTAGGGATA 71459 >seq29658 Length=1595399 Score = 114 bits (126), Expect = 3e-23 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||||| | | |||| | ||| |||||||||||||||| Sbjct 1468084 AGTGCAAAGGCAGAAGGGAGCTTGACTACAAGACCCACCCGTCAAGCAGGGACGAAAGTC 1468025 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||| ||||||| | |||| | ||||| || ||||| || || |||||||| ||| Sbjct 1468024 GACCTTAGTGATCCGACAGTGCCAAGTGGAAGGGTCGTCGTTCAACTGATAAAAGTTACT 1467965 Query 331 CTGGGGAT 338 || ||||| Sbjct 1467964 CTAGGGAT 1467957 >seq32717 Length=16798 Score = 107 bits (118), Expect = 4e-21 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||| ||||| |||||||| ||| ||||| | |||| | || || | | | Sbjct 2121 GCCTTCCAAAAGGTAACGGACGCGTGCAAAGGTTTCCTCGGGCCAGACAGAGATTGTCCC 2062 Query 208 CACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAA 267 |||||||||||| ||||| | |||||||| | |||| | ||| |||||||| |||| Sbjct 2061 TTGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGAGGAAA 2002 Query 268 GTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCT 327 ||||| |||| ||||||| | ||| || ||||| | | | ||||| || |||||||| | Sbjct 2001 GTCGGCCTTAGTGATCCGACAATGCCGAGTGGAAGGACTGCCGCTCAACAGATAAAAGTT 1942 Query 328 AC 329 || Sbjct 1941 AC 1940 >seq31257 Length=792502 Score = 77.0 bits (84), Expect = 6e-12 Identities = 112/156 (72%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||| | |||| | |||||| ||||| | |||||||||| ||||||||||| Sbjct 624709 GGGACAATCTCAGGTAGACAGTTTCTATGGGGTGTAGGCCTCCCAAAAGGTAACGGAGGC 624650 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | || | | | || | | |||||||||||| ||||| Sbjct 624649 GTGCAAAGGTTTCCTCGGGCCAGACGAAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 624591 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265 | |||||||| | |||| | ||| ||||||||||| Sbjct 624590 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGA 624555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982074137920