Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq30937 131 2e-28 seq13785 95.1 1e-17 seq4760 87.8 2e-15 seq22052 84.2 2e-14 seq32717 75.2 1e-11 seq21169 75.2 1e-11 >seq30937 Length=4778 Score = 131 bits (144), Expect = 2e-28 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | |||||||||| | | | | ||||||||| Sbjct 848 CGGGGTCTTTCCGTCTAGCCGCGGGTACACAGCATCTTCACTGCGATTTCGATTTCACTG 907 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || | | || |||||| || ||||||||||||||||||||||||| Sbjct 908 AG-TCTCTGCTGGAGACAGCGCCGCCATCATTATGCCATTCGTGCAGGTCGGAACTTACC 966 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTT 201 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 967 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 1026 Query 202 C 202 | Sbjct 1027 C 1027 >seq13785 Length=113992 Score = 95.1 bits (104), Expect = 1e-17 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | |||||||| | Sbjct 107875 CGGGGTCTTACCGTCTAGCCGTTGGTACTCTGCATCTTCACGGAGAATTCAATTTCATCG 107816 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| ||||||||||||| ||||| ||||| | Sbjct 107815 GGTCCATGTCGGAGACAGTGGGGCAGTCGTTACACCATTCGTGTAGGTCACTACTTATGC 107756 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 107755 GACAAGGAATTTCGCTACCTTAGGACAGTTA 107725 >seq4760 Length=2462692 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||||||| ||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct 2260349 TACACCTTTCGTGCTGGTCGGAACTTACCCAACAAGGAATTTTGCTACCTTGGGACCGTT 2260290 Query 173 A 173 | Sbjct 2260289 A 2260289 >seq22052 Length=270253 Score = 84.2 bits (92), Expect = 2e-14 Identities = 94/127 (74%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| || | | ||||||| ||| || | | ||||||| Sbjct 52159 GCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG-TCTCTCTCCGAGACAGT 52101 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || |||||||||| || ||||||||| |||||||||||||||||| Sbjct 52100 GCCCAGATTGTTACGCCTTTCGTGCAGGGCGAAACTTACCCAACAAGGAATTTCGCTACC 52041 Query 162 TTAGGAC 168 ||||||| Sbjct 52040 TTAGGAC 52034 >seq32717 Length=16798 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||| ||| ||| | ||||||||||| ||||||||| |||||||||||| |||| Sbjct 2303 TACACCTTTCATGCGGGTTGAAACTTACCCGATAAGGAATTTTGCTACCTTAGGATCGTT 2362 Query 173 A 173 | Sbjct 2363 A 2363 >seq21169 Length=217455 Score = 75.2 bits (82), Expect = 1e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 168 |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||| Sbjct 89528 TACACCATTCGTGCAGGTCGCTACTTATGCGACACGGAATTTCACTACCTTAGGAC 89583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547024165830