Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq30937 372 1e-100 seq14405 163 1e-37 seq30545 156 2e-35 seq18627 145 3e-32 seq13785 123 9e-26 seq32717 89.7 2e-15 seq29866 89.7 2e-15 seq33041 87.8 7e-15 seq21448 86.0 2e-14 seq13718 77.0 1e-11 seq19941 75.2 4e-11 >seq30937 Length=4778 Score = 372 bits (412), Expect = 1e-100 Identities = 449/600 (75%), Gaps = 22/600 (4%) Strand=Plus/Plus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||| ||||| ||| | ||||| |||| | ||| | | ||||| ||| ||||||| Sbjct 1945 GACGACGGACGTTAG-CACCCGCCGTCTGTCTCCCG-GATATCACTCATCGGTATTCGGA 2002 Query 63 GTTTGGTTGATTTCGGTAAG-CTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 ||||| | || |||||| | | | |||||||| | | |||||||||||| || Sbjct 2003 GTTTGCATCGGTTTGGTAAGTCGAGATGACCCCCTAGCCGAAACAGTGCTCTACCCCCA- 2061 Query 122 GAAGAAACACG--CGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | | || ||| || |||||||| ||||||||||||||||||||||| || Sbjct 2062 -ATGGTGTTCGTCCGAGGCGCTACCTAAATAGCTTTCGGGGAGAACCAGCTATCACCGAG 2120 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 ||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||| Sbjct 2121 TTTGATTAGCCTTTCACCCCTATCCACAAGTCATCCCCTGGCTTTTCAACGACAGTGGGT 2180 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||| | |||| |||||||||| ||||||||||||||| | || Sbjct 2181 TCGGTCCTCCGGTAACTGTTACGTCACTTTCAACCTGCTCATGGATAGATCACTCGGTTT 2240 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 ||||||| | | ||| ||| | |||||||||| |||||| |||| |||||||| ||| Sbjct 2241 CGGGTCTATACCCTGCAACT-AGACGCCCTATTAAGACTCGGTTTCCCTACGGCTCCCCT 2299 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 | | ||||||||| || ||| || || |||| | | |||| | ||||||| ||||| Sbjct 2300 ATTC-GGTTAACCTTGCTACAGAA-TATAAGTCGCTGACCCATTATACAAAAGGTACGCC 2357 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 ||||| || | || || |||||||| | ||||| ||||| |||||||||| Sbjct 2358 GTCAC--GGAA---------CATGTCCGCTCCGACTGCTTGTATGCACACGGTTTCAGGT 2406 Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 |||||||||||||| | ||||||| |||||| |||||||||||||||||| || | ||| Sbjct 2407 TCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTA 2466 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598 ||||||| |||||||||||| ||| || ||||||| ||| |||| || |||||| Sbjct 2467 TCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATCTTCAGACAGAATTTC 2526 >seq14405 Length=96599 Score = 163 bits (180), Expect = 1e-37 Identities = 280/401 (70%), Gaps = 34/401 (8%) Strand=Plus/Minus Query 210 TCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTT 269 |||||| || | | |||||| | ||| ||||||| ||||||| || | |||| |||| Sbjct 36648 TCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTT 36589 Query 270 CAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATCG-TGCCACTCATACGCC 327 || |||| |||||||||||||| | ||||||||| | | | || || | ||| Sbjct 36588 CATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCTATAAGCAATGACAATT----GCC 36533 Query 328 CTATTCGGACTCGCTTTCGCTACGGCTAC--------CCCACACGGGTTAACCTCGCGAC 379 || | || ||||||||||||| ||| | ||| |||||| || | Sbjct 36532 CTGTGAAGATTCGCTTTCGCTACAGCTTCGGTGGTTTCCC-------TTAACCAAGC--C 36482 Query 380 ACAACGCAA-ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAG 438 ||||| | | |||| ||||||||||||| ||||||| |||| || | | Sbjct 36481 ACAACCTATGAGTCGCCAGCTCATTCTTCAACAGGCACGTGGTCAGA--GTCTCGAG--- 36427 Query 439 GCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA 498 | || |||| || | ||| || | ||||||| || ||||||||||||||| Sbjct 36426 ---CCTC--CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG 36372 Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 ||||| ||||||||| ||||||||||||||| | | |||||||||||| |||||||||| Sbjct 36371 GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTT 36312 Query 559 AGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||| |||||||| | ||| |||||| ||| || Sbjct 36311 AGCCTTGCAAGGTGGTCCTTGCTGATACACACGGGATTCCA 36271 >seq30545 Length=481101 Score = 156 bits (172), Expect = 2e-35 Identities = 323/474 (68%), Gaps = 35/474 (7%) Strand=Plus/Plus Query 138 CTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACC 197 |||||||| || | |||| |||||||||||||| | | ||| || |||| ||||||| Sbjct 73078 CTGCACCTCAACGGATTTTAGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACC 73137 Query 198 CCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTC 257 |||| ||||| | |||| || | | |||||| | ||| |||||| ||||| | || Sbjct 73138 CCTAACCACAACTTATCCACTGATTCTTCAACATTAGTCAGTTCGGACCTCCTCTTAGTT 73197 Query 258 TTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTGC 315 | |||| |||||| | || |||||| ||||||| | || |||| | | | | ||| Sbjct 73198 TCACCCAAGCTTCATCTTGGTCATGGACAGATCACCCAGGTTTGGGTCCATAAGCAGTGA 73257 Query 316 CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC--------CCCACACGGGT 367 || | ||||||| |||||||||||||||||||| | ||| | Sbjct 73258 CAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGTTTCCC-------T 73306 Query 368 TAACCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCT 426 ||||| || ||| | | | || | | |||||||||||| ||||| || ||| Sbjct 73307 TAACCAAGC--CACTGCCTATGAGTCACCGACTCATTCTTCAACAGGCATGCGATCA--G 73362 Query 427 GGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTT 486 || | | || | |||| || | || || | |||||| || |||||| Sbjct 73363 AGTCTCGA----GC----CTCCTCCCACTGCATGGGAGCTTACAGTTTCATGTTCTATTT 73414 Query 487 CACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCAC-GGTACTTGTCCGCTATCGGTCA 545 || |||||| |||| ||||||||| ||||||||| |||||| | | ||||| || | Sbjct 73415 CAATCCCCGATGAGGGTTCTTTTCACCCTTCCCTCACGGGTACTACTTCACTATCAGTAA 73474 Query 546 CCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || |||||||||| | ||| ||||||| | ||||||||||| ||| || Sbjct 73475 CCCAGGAGTATTTTGCCTTCCAAGGTGGTCATTGCTGATTCACACGAGATTCCA 73528 >seq18627 Length=31601 Score = 145 bits (160), Expect = 3e-32 Identities = 165/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||||||| ||||||||||||||||||||| ||| | | |||||| |||| |||||| Sbjct 26683 GCTGCACCTCAATGCATTTCGGGGAGAACCAACTAGCTCTGGGTTTGAGTGGCATTTCAC 26742 Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256 ||||| ||||| |||||| || | | |||||| | ||| |||| | ||||||| || Sbjct 26743 CCCTAACCACAACTCATCCACTGATTCTTCAACATCAGTCAGTTCAGACCTCCACTTAGT 26802 Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGTG 314 | |||| |||||| |||| |||||||||||||| | ||| |||| | | ||| Sbjct 26803 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCAGGTCCATAAGTAGTG 26862 Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354 || | ||| | | |||||||||||||||||||| Sbjct 26863 ACAAT----TGCCTTGTGAAGACTCGCTTTCGCTACGGCT 26898 >seq13785 Length=113992 Score = 123 bits (136), Expect = 9e-26 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146 ||||| |||||| |||| |||||| |||||| || | ||| || | || | Sbjct 106557 GGGCCACCCTAGCCCATTGAGTGCTTTACCTCGGGCCATTGACATCATGCGTTCTACTGA 106498 Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206 ||| |||||| || |||||||||| | | ||| ||||||||||||||||| |||| Sbjct 106497 AATAGATTTCGCAGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 106438 Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265 | ||||||||| | ||| | || || ||||||||||||||||| | | ||| | | Sbjct 106437 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGTCTGTTAGAGCTC 106378 Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC 305 ||||||||||| ||||| |||||| | | |||||||| Sbjct 106377 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC 106338 >seq32717 Length=16798 Score = 89.7 bits (98), Expect = 2e-15 Identities = 89/114 (78%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 138 CTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACC 197 |||||||| || |||||||||||||||||||||| | | | ||| || |||| ||||||| Sbjct 9203 CTGCACCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTAGGTTCGAGTGGCATTTCACC 9262 Query 198 CCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCAC 251 | | ||| | |||| || | | | |||||| | ||| |||||| ||||||| Sbjct 9263 CATGACCATAACTCAT-CCTTGATTCTTCAACATCAGTCGGTTCGAACCTCCAC 9315 >seq29866 Length=114638 Score = 89.7 bits (98), Expect = 2e-15 Identities = 119/162 (73%), Gaps = 10/162 (6%) Strand=Plus/Plus Query 397 GCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGG 456 ||||||||||||| |||||||| |||| || ||| | | || |||| || | Sbjct 62246 GCTCATTCTTCAACAGGCACGCGGTCAAA--GT-CCTGAG-----CCTC--CTCCCACTG 62295 Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTT 516 ||| ||| | ||||||| || ||||||||||||| | ||||| ||||||||| || Sbjct 62296 CTTGGGAGCATACGGTTTCATGTTCTATTTCACTCCCTGATGGGGGTTCTTTTCACCCTT 62355 Query 517 CCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 | ||||||||||| | | |||||||||| |||| || || Sbjct 62356 CTCTCACGGTACTACTTCATTATCGGTCACTCAGGATTACTT 62397 >seq33041 Length=152846 Score = 87.8 bits (96), Expect = 7e-15 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558 ||||| | ||||||| ||||||||||||||| | | |||||||| ||| |||||||||| Sbjct 17654 GGGGTTCCTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTTACCTAGGAGTATTT 17713 Query 559 AGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||| |||||||| | |||||||||| ||| || Sbjct 17714 AGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 17754 >seq21448 Length=1770141 Score = 86.0 bits (94), Expect = 2e-14 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 161 AGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCA 220 ||||||| ||| | | ||||| || || | ||||| ||||| ||||| |||| | || | Sbjct 1594325 AGAACCAACTAACTCTAAGTTCGAGTGACATTTCATCCCTAACCACAACTCATTCACTTA 1594266 Query 221 GTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCA 280 | |||||| | ||| | | || ||||||| || | |||| |||||| || || Sbjct 1594265 TTCTTCAACATCAGTCGATCCGAACCTCCACTTAGTTTCACCCAAGCTTCATCCCAATCA 1594206 Query 281 TGGATAGATCACTTCGCTTCGGGTC 305 |||||||||||||| | ||| |||| Sbjct 1594205 TGGATAGATCACTTAGGTTCAGGTC 1594181 >seq13718 Length=308058 Score = 77.0 bits (84), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 468 ATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527 || |||||| || ||||||||||||| ||||| |||||||| ||| |||| |||| Sbjct 224244 ATAGTTTCATGTTCTATTTCACTCCCGATGTGGGGTT-TTTTCACCCTTCTCTCATGGTA 224302 Query 528 CTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587 || | | |||||||| | |||||||||||| ||| |||| ||| | ||||| Sbjct 224303 CTAATTCACTATCGGTTGACTAGGAGTATTTAGTCTTGCAAGGTGATCCTTGCTAATTCA 224362 Query 588 CACGAAATTTCA 599 ||| |||| || Sbjct 224363 CACAGAATTCCA 224374 >seq19941 Length=1738176 Score = 75.2 bits (82), Expect = 4e-11 Identities = 59/71 (83%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196 ||||| ||| ||||||||||| ||||||||||||| | | |||||| || | |||||| Sbjct 822062 GCTGCGCCTCAATGCATTTCGTGGAGAACCAGCTAGCTCTGGGTTTGAGTGCCATTTCAC 822003 Query 197 CCCTATCCACA 207 ||||| ||||| Sbjct 822002 CCCTAACCACA 821992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816997102080