Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4141 183 6e-44 seq4996 172 1e-40 seq32717 134 3e-29 seq7528 125 1e-26 seq7238 105 1e-20 seq14257 80.6 5e-13 >seq4141 Length=628696 Score = 183 bits (202), Expect = 6e-44 Identities = 224/305 (73%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 193232 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 193291 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||||||||| | ||| ||||| | || ||||| || Sbjct 193292 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGTTGATCATCCTCTTGGACCAGCTACTAAT 193351 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 193352 CATTGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 193411 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || || ||||| | | ||| |||||||| Sbjct 193412 GCGGATTCCTCCTTTTTC--------------TCCTCAGCC--TATAGGGTATTAGTAGC 193455 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || || ||||| || ||| |||||||| |||||| Sbjct 193456 CGTTTCCAGTTGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGCGTTACTCATCCGTCCA 193514 Query 300 CCACT 304 |||| Sbjct 193515 TCACT 193519 >seq4996 Length=541 Score = 172 bits (190), Expect = 1e-40 Identities = 134/160 (84%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct 144 GGCATGGCTGGATCAGGGTTGCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 203 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||| || |||||||||||| || |||| | | ||| |||||||| || | ||| ||| Sbjct 204 GAGTCCGGACCGTGTCTCAGTTCCGGTGTGACTGATCATCCTCTCAGACCAGTTACAGAT 263 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| |||||| ||| ||| | ||||||||| |||||| Sbjct 264 CGTCGCCTTGGTAGGCCTTTACCCCACCAACTAGCTAATC 303 >seq32717 Length=16798 Score = 134 bits (148), Expect = 3e-29 Identities = 205/290 (71%), Gaps = 18/290 (6%) Strand=Plus/Plus Query 11 CATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGC 70 ||||||| |||| ||||||||| || || ||||| | |||||| | |||||||||||| Sbjct 13301 CATCAGGCTTTCGCCCATTGTGAAAAATTCCCCATTACTGCCTTCTTTAGGAGTCTGGGT 13360 Query 71 CGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 | |||||||||| | ||||| ||| |||||||| || ||| || | ||| | || Sbjct 13361 CAGGTCTCAGTCCTAGTGTGGTTAATCATCCTCTCAGACCAACTATTGACCATCGCCATG 13420 Query 131 GTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAAT 189 || | |||| ||||||||||| |||||| | | |||| || || | || ||| | Sbjct 13421 GTATGTTATTGCCTCACCAACTAGCTAATCAGACACGAGTCCCTCCTCGGGCGGATTCCT 13480 Query 190 CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAA 249 | || ||| | ||| | | |||| ||||||||| |||||||| Sbjct 13481 CCTT------------TTGC--TTCTCAGCC--TATGGGGTATTAGCAGCCGTTTCCAGC 13524 Query 250 CGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||| |||| ||| || || ||||| || ||||||||||||||| |||| Sbjct 13525 TGTTGTTCCCCTCCCAAGGGTAGGTT-CTTACGTGTTACTCACCCTTCCG 13573 >seq7528 Length=2495505 Score = 125 bits (138), Expect = 1e-26 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||||| || || | ||||||||||||||||| Sbjct 1571332 GGCATTGCTACGTCAGGATTTCGCCCATTGTGGAAAATTCATCACTGCTGCCTCCCGTAA 1571391 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||| |||| ||||||| ||||| ||||| | ||| ||||| || || |||| || Sbjct 1571392 GAGTTTGGGTTATGTCTCAATCCCAGTGTGGTTGATCATCCTCTTAGACCAACTACTAAT 1571451 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 | ||| |||||| | |||| ||||||||||| ||||| Sbjct 1571452 CATCGCCTTGGTAAGTTATTGCCTCACCAACTAGCTAAT 1571490 >seq7238 Length=61032 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 |||| ||| | ||||||| || || || | | |||||||| ||||||||| ||||| Sbjct 56523 TCAGAATTTTGCTCATTGTGGAAAATTACCTAATATTGCCTCCCATAGGAGTCTAGGCCG 56582 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||| | |||| | ||| |||||||| | ||| |||| || |||||| Sbjct 56583 TGTCTCAGTCCTAGTGTGATTGATCATCCTCTCAGACTAACTATTGATCATCACCTTGGT 56642 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 ||||||| || |||||||| |||||| Sbjct 56643 AAGCTATTACCTTACCAACTAGCTAATC 56670 >seq14257 Length=243754 Score = 80.6 bits (88), Expect = 5e-13 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 || || |||| | ||||||| || || ||||| |||||||||| |||||||||||||| Sbjct 27899 TCTGGCTTTCGCTCATTGTGGAAAATTTCCCACCGCTGCCTCCCATAGGAGTCTGGGCCT 27958 Query 73 TGTCTCAGTCCCAA 86 |||||||||| ||| Sbjct 27959 TGTCTCAGTCACAA 27972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998068830720