Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq30937 295 1e-77 seq30545 197 2e-48 seq32717 196 8e-48 seq13785 185 1e-44 seq21399 141 1e-31 seq13846 134 2e-29 seq29658 127 3e-27 seq10337 125 1e-26 seq32422 96.9 5e-18 seq5560 75.2 2e-11 seq18614 73.4 6e-11 >seq30937 Length=4778 Score = 295 bits (326), Expect = 1e-77 Identities = 229/273 (84%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62 ||| ||||||| |||||||||| |||||| ||||||| ||| ||| ||||| | | || Sbjct 145 AGGTGGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCATCCGAACATAGCTACTCGGC 204 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 |||| |||| ||||| | ||||||||||| ||||| | |||||||||||||| Sbjct 205 AATGCGACTGGCGTCACAACCGAAACACCAGAGGTTCGTCCACTCTGGTCCTCTCGTACT 264 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | | ||| ||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct 265 AGGAGCAGATCCTCTCAAATTTCCAACGCCCACGGTAGATAGGGACCGAACTGTCTCACG 324 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||| |||||||||||||| ||||||||| ||||||||||| ||||||||||||| Sbjct 325 ACGTTCTAAACCCAGCTCGCGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCT 384 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||||||||||| |||||||||||| Sbjct 385 GCTTCAGCCCCAGGATGAGATGAGCCGACATCG 417 >seq30545 Length=481101 Score = 197 bits (218), Expect = 2e-48 Identities = 202/262 (77%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| |||||| |||||| || | |||| ||| |||||| | | ||| | Sbjct 71149 CTTAGATGCTTTCAGCAGTTATCCATTTCGTACTTGGCTACCCAGCGTTTATCGTGG--G 71206 Query 77 TACAA---CTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTC 133 ||||| |||| ||| |||||| |||| ||||| |||||| ||||| ||| || || Sbjct 71207 TACAATAACTGGCACACTAGAGGTGCGTCCTTCCCGACCCTCTCATACTAGGGAAAGGTC 71266 Query 134 CTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAAC 193 ||||||| || | |||||| ||||| |||||||||| ||| |||||||| ||| Sbjct 71267 CTCTCAATGCTCTAAAGCCCACATTGGATATGGACCGAACTATCTTATGACGTTCTAAAC 71326 Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253 ||||||| ||| || |||||||||||||||| || ||||||||| || |||| ||||| | Sbjct 71327 CCAGCTCACGTACCGCTTTAATGGGCGAACAACCAAACCCTTGGAACATACTACAGCCTC 71386 Query 254 AGGATGAGACGAGCCGACATCG 275 ||| | || |||||||||||| Sbjct 71387 AGGTGGCGAAGAGCCGACATCG 71408 >seq32717 Length=16798 Score = 196 bits (216), Expect = 8e-48 Identities = 200/260 (77%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGG-CA 75 ||||||||| |||||| ||||| | |||| ||| |||| | | | ||| || Sbjct 1620 CTTAGATGCTTTCAGCAATTATCTGCTATGCACTTGGCTACCCAACGTTTATCGTGGGCA 1679 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||||| ||| |||||| | ||| |||| |||||||||||||| ||| | |||| Sbjct 1680 CAATAACTGGCACACTAGAGGTGTATCCTTCCCAGTCCTCTCGTACTAGGGAAAATTCCT 1739 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| ||||| ||||||||||||||| ||||||| ||||||| Sbjct 1740 CTCAATGCTCTAACGCCCACATTGGATATGGACCGAACTGTCTCACGACGTTTTGAACCC 1799 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| | |||||||||||||||| |||||||||||| || |||| |||||||| Sbjct 1800 AGCTCACGTATCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTATAGCCCCAG 1859 Query 256 GATGAGACGAGCCGACATCG 275 | | | ||| |||||||| Sbjct 1860 GTGGCAAAGAGACGACATCG 1879 >seq13785 Length=113992 Score = 185 bits (204), Expect = 1e-44 Identities = 181/233 (78%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 |||||||| ||| | | | |||||| ||||| ||| ||||| ||||| | ||| | Sbjct 108526 AACTTAGCAGCCCGACACTACTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAAC 108467 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || |||||||| ||||| || ||||||| || ||||| || || ||| ||| Sbjct 108466 CCAGTCCTCTCATACTAGGGTTGGCTCCTCGCAGTTTTCCCTTTAACACCAACGGTAGAT 108407 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| ||||||||||||| ||||||||| |||||| ||| ||| || ||| ||| |||||| Sbjct 108406 AGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAA 108347 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 108346 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 108294 >seq21399 Length=699063 Score = 141 bits (156), Expect = 1e-31 Identities = 126/158 (80%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 80 AACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCA 139 |||||| ||||| |||| ||||| ||||||||||||| ||||| ||| || |||||||| Sbjct 236444 AACTGGCACACCAAAGGTGTGTCCTTCCCGGTCCTCTCATACTAGGGAAAGGTCCTCTCA 236503 Query 140 AATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCT 199 | || || ||||| ||||| ||||||||||||||| |||||||| |||||| || Sbjct 236504 ATGCTCTAACTCCCACATAGGATATGGACCGAACTGTCTCATGACGTTCTTAACCCAACT 236563 Query 200 CGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGG 237 | || | |||||||||| ||||| || ||| ||||| Sbjct 236564 CATGTATCGCTTTAATGGGTGAACAACCAAACTCTTGG 236601 >seq13846 Length=325444 Score = 134 bits (148), Expect = 2e-29 Identities = 153/204 (75%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||||| ||||| |||| || ||| ||||||||||||||| ||| | Sbjct 24574 GGCACGATAACTGGCACACCAAAGGTGCATCTTTCCTGGTCCTCTCGTACTAGGGAAAAG 24515 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || |||||||| || || ||| |||||||||| ||| ||||||| Sbjct 24514 TCCTCTCAATGCTCTCACGCCCAC-ACTAGTATGGATTGAACTGTCTCACGATGTTCTGA 24456 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 | ||| ||| ||| | |||||||| |||| ||||||||||| || |||| || || Sbjct 24455 ATCCAACTCACGTACTGCTTTAATGATTAAACAATCCAACCCTTGGAACATACTACATCC 24396 Query 252 CCAGGATGAGACGAGCCGACATCG 275 ||||| | || |||| ||||||| Sbjct 24395 CCAGGTGGCGAAGAGCTGACATCG 24372 >seq29658 Length=1595399 Score = 127 bits (140), Expect = 3e-27 Identities = 116/145 (80%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 || |||||| || |||||||| |||||| ||||||||||||||| ||||||||||| Sbjct 1467761 TCTTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGA 1467820 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC-AGC 250 | ||||||| ||| |||||||| || |||| |||||||||||| || |||| | | | Sbjct 1467821 AACCAGCTCACGTATTGCTTTAATGAGCAAACAACCCAACCCTTGGAACATACTACAACC 1467880 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 |||||| | || ||||||||||| Sbjct 1467881 CCCAGGTGGCGAAAAGCCGACATCG 1467905 >seq10337 Length=28041 Score = 125 bits (138), Expect = 1e-26 Identities = 187/264 (71%), Gaps = 5/264 (2%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCA----CTT 71 ||||||||| |||||| ||||| |||| |||| || |||| | | | | || Sbjct 17897 CTTAGATGCTTTCAGCAATTATCTACTCCACACTTGGCAACCCAACGTTTACCGTGGCTG 17838 Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||||| ||||| |||| |||| |||| | ||| |||||| ||| | Sbjct 17837 GGCACGATAACTGGCACACCAAAGGTGAGTCCTTCCCAATATTCTTGTACTAGGGAAATG 17778 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 || ||| || || | |||||| | |||| ||||| | | |||| | || |||| | Sbjct 17777 TCTTCTTAATGCTCTCATGCCCACACCAGATATGGACCCATTTATCTCACAACATTCTAA 17718 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 |||||||| || || |||||||||||||||| ||||||||||| || ||| || | Sbjct 17717 ACCCAGCTTATGTACCGCTTTAATGGGCGAACAATCCAACCCTTGGAACATACAACACTC 17658 Query 252 CCAGGATGAGACGAGCCGACATCG 275 | ||| | || |||| ||||||| Sbjct 17657 CAAGGTGGCGAAGAGCTGACATCG 17634 >seq32422 Length=2614749 Score = 96.9 bits (106), Expect = 5e-18 Identities = 106/140 (76%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 101 TCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGG 160 ||| ||| ||| |||||||||||||| || |||| |||| || | ||| || || Sbjct 2016693 TCCCTCCTTGTCTTCTCGTACTAAGGAAAGGTCCTGTCAATGCTCTAATGCC-ACACTGG 2016635 Query 161 ATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCG 220 ||| ||| | ||||||||| | ||||| |||||| ||| | | | || ||||| ||||| Sbjct 2016634 ATATGGATCAAACTGTCTCACAACGTTTTGAACCTAGCCCACATACCACTTTAGTGGGCA 2016575 Query 221 AACAGCCCAACCCTTGGGAC 240 |||| ||||||||||| || Sbjct 2016574 AACAATCCAACCCTTGGAAC 2016555 >seq5560 Length=1106280 Score = 75.2 bits (82), Expect = 2e-11 Identities = 92/126 (73%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 150 GCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTC 209 |||||| || ||| ||| ||||||||| | | ||||||||||| || || | || | Sbjct 483569 GCCCACATCGAATATAAACCAAACTGTCTCACAATATTCTGAACCCAACTTGCATACCAC 483628 Query 210 TTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCG 269 |||| ||||| ||||| |||||||||| || ||| | ||||| | | | ||| | Sbjct 483629 TTTAGTGGGCAAACAGTCCAACCCTTGAAACAGACTATAACCCCAAGTAGCAAAGAGTTG 483688 Query 270 ACATCG 275 |||||| Sbjct 483689 ACATCG 483694 >seq18614 Length=1030080 Score = 73.4 bits (80), Expect = 6e-11 Identities = 58/70 (83%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| || || ||||||| | | ||||||||||||||||| | | Sbjct 180552 ACGTTCTGAACCCAGCTCATGTACCGCTTTAATTGACAAACAGCCCAACCCTTGGAATAT 180493 Query 243 ACTTCAGCCC 252 ||| ||| || Sbjct 180492 ACTACAGTCC 180483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780549102120