Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq15742 188 1e-45 seq28979 122 2e-25 seq28776 118 2e-24 seq9713 107 4e-21 seq20518 82.4 1e-13 >seq15742 Length=178311 Score = 188 bits (208), Expect = 1e-45 Identities = 154/186 (83%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 ||||||||||||| |||| |||||||||||| | |||||||| || ||||||||| Sbjct 125071 GATGTTCTGGGCCACACGTGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCG 125130 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 | | ||||||||||| | ||| | ||||| |||||||||| |||||||||| ||| Sbjct 125131 ACAAGCTTGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTG 125189 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 ||||||| ||||||| ||||||||||||| ||||||||| |||||||| ||||||||| Sbjct 125190 GTCTTCAATGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTA 125249 Query 320 CCCTTT 325 |||||| Sbjct 125250 CCCTTT 125255 >seq28979 Length=191760 Score = 122 bits (134), Expect = 2e-25 Identities = 89/101 (88%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||| ||||||||| | ||| | ||| ||||||||||||| ||||||||||| ||| Sbjct 132099 CTTCTTATAGGGACTATGGCCGCTTAGGCC-ATGGAAGTTTGAGTCAATAACAGGTTTGT 132157 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 ||||||||||||||||| |||||||||| || ||||||||| Sbjct 132158 GATGCCCTTAGATGTTCCGGGCCGCACGAGCACTACACTGA 132198 >seq28776 Length=557903 Score = 118 bits (130), Expect = 2e-24 Identities = 100/122 (82%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266 ||||||||||| | ||||| | ||| |||||||||| |||||||||| ||| | |||| Sbjct 312877 TGGGTAATCTT-TGAAACTTCATTGTGATGGGGATAGATCATTGCAATTTTTGGTTTTCA 312935 Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326 ||||||||| |||||| ||| || ||||| ||| | ||||||| |||| ||||||||| Sbjct 312936 ACGAGGAATTCCTAGTTAGCACGAGTCATAAGCTTGAGTTGATTGTGTCCTTGCCCTTTG 312995 Query 327 TA 328 || Sbjct 312996 TA 312997 >seq9713 Length=89002 Score = 107 bits (118), Expect = 4e-21 Identities = 96/119 (81%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||| || ||| | ||| |||||||||| |||||||||| | | ||||||| | Sbjct 73886 GTAATCTTTGAAATCTCATT-GTGATGGGGATAGATCATTGCAATTGTCGGTCTTCAATG 73944 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| ||||||||| ||| ||||||| | || ||||| || ||| |||||||||||| Sbjct 73945 AGAAATTCCTAGTAAGTGCGAGTCATCAACTCGTGTTGACTATGTCTCTGCCCTTTGTA 74003 Score = 98.7 bits (108), Expect = 2e-18 Identities = 143/198 (72%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 131 ATGCCCTTAGATGTTCT-GGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| | ||||| |||| ||||| || | | |||||||| || Sbjct 73266 ATGCCCTTAGATGTTTTTGGGCCACACGGATGCTACTCTAATGTATTCAACGAGTCTATA 73325 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 |||| | | ||| | |||||||||| | ||| | ||||| || | ||||| ||| Sbjct 73326 TTCTTGACTGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGAGAATAGATAATT 73384 Query 250 GCAATTATTGCTCTT-CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 |||||| ||| | || ||||||||||| ||||||||| | || || || | |||||| Sbjct 73385 GCAATTGTTGGTTTTTCAACGAGGAATTCCTAGTAAGTACAAGTTATTAGTTCACGTTGA 73444 Query 309 TTACGTCCCTGCCCTTTG 326 ||| | || |||||| Sbjct 73445 CTACTTTTCTATCCTTTG 73462 >seq20518 Length=2562168 Score = 82.4 bits (90), Expect = 1e-13 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 240 ATAGAGCATTGCAATTATTGCTCTT-CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298 ||||| ||||||||| ||| | || ||||||||||| |||||||||| | || ||||| Sbjct 183055 ATAGATAATTGCAATTGTTGGTTTTTCAACGAGGAATTCCTAGTAAGCACAAGTTATCAG 183114 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | |||||| ||||| ||| ||||| ||| Sbjct 183115 CTCACGTTGACTACGTTCCTACCCTTCGTA 183144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946885813760