Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq20709 708 0.0 seq31885 695 0.0 seq22226 527 2e-147 seq11995 324 4e-86 seq24023 217 5e-54 seq25106 197 5e-48 seq19434 143 9e-32 seq32502 140 1e-30 seq18317 127 7e-27 >seq20709 Length=73818 Score = 708 bits (784), Expect = 0.0 Identities = 481/534 (90%), Gaps = 7/534 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 27119 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 27060 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 27059 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 27000 Query 127 GGCCCGC-GAAG--GACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 | || || |||| |||||| ||| ||| | || | ||| || ||||| |||| Sbjct 26999 GACCGGCCGAAGCCGACCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCA 26942 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG-GCTCCC 241 || ||||||||| |||| ||| ||||||||||||||||| ||| | | |||||| Sbjct 26941 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCTGTTTCCAGCTCCC 26882 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26881 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 26822 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 26821 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 26762 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26761 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 26702 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 26701 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 26642 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 26641 TTTCTTCACTTTGACATTCAGAGCACTGGGCAAAAATCACATTGCGTCAACATC 26588 >seq31885 Length=151893 Score = 695 bits (770), Expect = 0.0 Identities = 478/534 (90%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 66864 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 66923 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 66924 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 66983 Query 127 GGCCCGC-GAAG--GACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 | || || |||| |||||| ||| ||| | || | ||| || ||||| |||| Sbjct 66984 GACCGGCCGAAGCCGACCTTGGGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGATTCA 67041 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG-GCTCCC 241 || ||||||||| |||| ||| ||||||||||||||||| ||| | | |||||| Sbjct 67042 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCTGTTTCCAGCTCCC 67101 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67102 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 67161 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 67162 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGT 67221 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 67222 AGACAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAAGTGACGAG 67281 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 67282 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCTCCGTTTACCCGCGCTTGGTTGAA 67341 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67342 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 67395 >seq22226 Length=229725 Score = 527 bits (584), Expect = 2e-147 Identities = 441/534 (83%), Gaps = 7/534 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| ||||||| |||| | ||||||| || ||| |||| Sbjct 143614 CTTTTGTTCCACACGAGATTTTTGTTCTCGTTGAGCTCATCTTAGGATACTTGCATTATC 143673 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||| || || ||||||| |||||||| || |||||||||| || |||||||| Sbjct 143674 TTTTAACAGAGGTACCACCCCAGCTAAACTCCCTACATGACAATGTCTTCCGCCCGGATC 143733 Query 127 GGCCC-GCGAAG--GACCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 | | |||| |||| | ||| ||| | || | ||| | ||||| |||| Sbjct 143734 AATCGAGTGAAGAAGACCCTGGGTCCAAAAAGAGGGGCAGTGCCTCGC--TTCCGATTCA 143791 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG-GCTCCC 241 || ||||||||| ||| ||| ||||||||||||||||| || | | ||||| Sbjct 143792 CGGAATAAGTAAAATAACATTAAAAGTAGTGGTATTTCACTTTCGTTGTTTCCAGCTCCT 143851 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 || ||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 143852 ACATATCCTAAACTTCTCAAGTCATTTCACAAAGTCGAACTAGAGTCAAGCTCAACAGGA 143911 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||||| ||| ||||||| ||||||||||||||||||||| ||||||| || |||||| Sbjct 143912 TCTTCTTTTCCCACTGATTCTGCCAAGCCCGTTCCCTTGGCTATGGTTTCACTGGATAGT 143971 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 || ||||||||||| ||||| ||| |||||||||||| ||||||||||||||||||||| Sbjct 143972 AGGCAGGGACAGTGGAAATCTTGTTGATCCATTCATGCACGTCACTAATTAGATGACGAG 144031 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||| Sbjct 144032 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCTCGCCGTTTAATCGCACTTGGTTGAA 144091 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||| |||||||||||||| |||||||||||||||||||||||||||| | |||| Sbjct 144092 TTTTTTCACTTTGACATTTAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 144145 >seq11995 Length=126909 Score = 324 bits (358), Expect = 4e-86 Identities = 310/390 (79%), Gaps = 8/390 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| ||||||| |||| | |||| |||||| ||||| Sbjct 32026 CTTTTGTTCCACATGAGATTTTTGTTCTCGTTGAGCTCATCTTAAAACACCTATGTTATC 31967 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||| |||||||||||||| |||||||||||||||| |||||| || |||| || Sbjct 31966 TTTTAACATATGTGCCGCCCCAGACAAACTCCCCACCTGAGAATGTCTTCTGCCCGAATT 31907 Query 127 GGCCCGC-GAAG--GACCTTAACGCCAGAAAATG-GTCGGTGAAGACCAGTTCCGCTTCA 182 | | | |||| |||||| ||| |||| | | | ||| ||| ||||| |||| Sbjct 31906 GACTGACTGAAGCCGACCTTGGGTCCAAAAAAAGTGGCAGTGCC--CCACTTCCGATTCA 31849 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACG-GCTCCC 241 | || ||||||||| |||| ||| ||||||||||||||||| | | | |||||| Sbjct 31848 TGGAATAAGTAAAAGAACGTTAAAAGTAGTGGTATTTCACTTTCATTGTTTCTAGCTCCC 31789 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| ||| ||||||||||||||||||||||| | |||||||| | ||||| |||| Sbjct 31788 ACTTATGCTATACCTCTCAAGTCATTTCACAAAG-CAAACTAGAGTTCAACTCAATAGGG 31730 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||| | ||||||||||| |||||||||| |||||||| ||| |||||| Sbjct 31729 TCTTCTTTCCCCGTTTATTCCGCCAAGTATGTTCCCTTGGTTGTGGTTTTGCTGGATAGT 31670 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCC 391 ||| ||||||| |||||||||||||||||| Sbjct 31669 AGACAGGGACAATGGGAATCTCGTTAATCC 31640 Score = 156 bits (172), Expect = 1e-35 Identities = 161/208 (77%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG-CTCCCACTTA 246 ||||||||| | | ||| ||||||||||| |||| | | | ||| |||||| Sbjct 30678 TAAGTAAAATAGCATTAAAAATAGTGGTATTTAACTTTTGTTGTTTCTAACTCTCACTTA 30619 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| Sbjct 30618 TCCTACACCTCTCAAGTTATTTCACAAAGTCGGACTAGAGTCAAGCTTAACAAGGTCTTC 30559 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||| | |||||| | |||||| || ||||| || |||| | |||||||||| Sbjct 30558 TTTCCTTGTTGATTCTGTCAAGCCTATTTCCTTGCTGGTAATTTCAGTGAATAGTAGATA 30499 Query 367 GGGACAGTGGGAATCTCGTTAATCCATT 394 |||| || ||| | ||||||||||| Sbjct 30498 AAGACAATGAAAAT-TTGTTAATCCATT 30472 >seq24023 Length=122681 Score = 217 bits (240), Expect = 5e-54 Identities = 132/140 (94%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 ||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 66474 ATGCGTGTCATTAATTAGATGACGAGGCATTTGGCTGCCTTAAGAGAGTCATAGTTACTC 66533 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 | || |||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 66534 CTTCCATTTACCCGCGCTTGGTTGTATTTCTTCACTTTGACATTCAGAGCACTGGGCATA 66593 Query 516 AATCACATTGCGTCAACATC 535 |||||||||||||||||||| Sbjct 66594 AATCACATTGCGTCAACATC 66613 >seq25106 Length=399247 Score = 197 bits (218), Expect = 5e-48 Identities = 132/147 (90%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||| || || |||||||||||||| | |||||||| ||||||||||||||||| Sbjct 221596 TCCATTCACGCATGTTACTAATTAGATGACATGACATTTGGCCACCTTAAGAGAGTCATA 221537 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 ||||||| | ||||||||| ||| ||||||||||||||||||||||||||| ||| || | Sbjct 221536 GTTACTCTCCCCGTTTACCTGCGTTTGGTTGAATTTCTTCACTTTGACATTTAGAACATT 221477 Query 509 GGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||| Sbjct 221476 GGGCAGAAATCACATTGCGTCAACATC 221450 Score = 149 bits (164), Expect = 2e-33 Identities = 102/115 (89%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 ||||||||||| || |||||||||||||| | |||||||| ||||||||||||||||| Sbjct 221877 TCCATTCATGCATGTTACTAATTAGATGACATGACATTTGGCCACCTTAAGAGAGTCATA 221818 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGA 503 ||||||| | || |||||| ||| ||||||||||||||||||||||||||| ||| Sbjct 221817 GTTACTCTCCCCCTTTACCTGCGTTTGGTTGAATTTCTTCACTTTGACATTTAGA 221763 >seq19434 Length=601577 Score = 143 bits (158), Expect = 9e-32 Identities = 84/87 (97%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||| Sbjct 498152 GTTACTCCCGCCGTTTACCTGCGCTTGATTGAATTTTTTCACTTTGACATTCAGAGCACT 498211 Query 509 GGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||| Sbjct 498212 GGGCAGAAATCACATTGCGTCAACATC 498238 >seq32502 Length=299063 Score = 140 bits (154), Expect = 1e-30 Identities = 85/90 (94%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct 263433 CCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGAACTAAAGTCAAGCTCAACA 263374 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAG 328 ||||||||||||| |||||||| ||||||| Sbjct 263373 GGGTCTTCTTTCCTCGCTGATTTCGCCAAG 263344 >seq18317 Length=517636 Score = 127 bits (140), Expect = 7e-27 Identities = 113/140 (81%), Gaps = 5/140 (4%) Strand=Plus/Minus Query 203 TAAGGGTAGTGGTATTTCACTTGCGCCGAAA---CGGCTCCCACTTATTCTACACCTCTC 259 ||| | ||||| |||||||||| || || | |||||| |||| ||||||||| Sbjct 229302 TAAAGTTAGTGATATTTCACTTACGT--AATTTCCAACTCCCATTTATCATACACCTCTT 229245 Query 260 AAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGAT 319 |||||||||||||||||| |||||||||| ||||||||| ||||| ||||||| |||| Sbjct 229244 AAGTCATTTCACAAAGTCAGACTAGAGTCGAGCTCAACAAAGTCTTATTTCCCCATTGAT 229185 Query 320 TCCGCCAAGCCCGTTCCCTT 339 | |||||||| |||||||| Sbjct 229184 TTTGCCAAGCCTGTTCCCTT 229165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634657604160