Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glycine_20soja_20[genbank_20GCA_5F000722935.2_202014-12-17] 33,170 sequences; 863,568,428 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq25784 131 1e-25 seq20448 113 4e-20 seq6459 95.1 1e-14 seq19763 84.2 2e-11 >seq25784 Length=99802 Score = 131 bits (144), Expect = 1e-25 Identities = 219/314 (70%), Gaps = 2/314 (1%) Strand=Plus/Minus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | ||| | || ||| |||||||| || || ||||| || |||| Sbjct 39432 TGTTCCCAATCCAATATCCTCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCT 39373 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| || | || | ||| | ||||||| | | | ||| | Sbjct 39372 GGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGACTCCCTCAGCGA-C 39314 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || || | || ||| | | || || | || ||||| ||||| || ||||| ||||| Sbjct 39313 GGCGAGCGCCACTTCGTCAGTCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTA 39254 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 |||||| | | || ||| || |||| | ||| | | ||||| || ||| Sbjct 39253 CTTGAGAACCTCGCTGGGCGCTTCACGAAGGAAATCCAAATCCCCGAGGCCCGCGCCTTC 39194 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGAT 61362 |||||||||||||| ||||| ||||| |||||| ||||||||||| | ||| |||| Sbjct 39193 TACGGCTTCCAGATCGCCATCGAGAACATCCACTTCGAGATGTACAGCCTCCTCCTCGAA 39134 Query 61363 ACGTACATCAGGGA 61376 || ||||||| ||| Sbjct 39133 ACCTACATCAAGGA 39120 >seq20448 Length=1126904 Score = 113 bits (124), Expect = 4e-20 Identities = 541/844 (64%), Gaps = 22/844 (3%) Strand=Plus/Plus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 ||||| || || || || || ||||||||||||| ||||||||| || | || | ||| Sbjct 920097 ATGTATAAGAAAGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGTGGACCTCTCGCAGGAC 920156 Query 61156 ATGAATGACTGGGAG-CGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGC 61214 | |||||| | | | ||| ||| || | || ||||| | || || | || Sbjct 920157 CTCCGCCACTGGGCCACCCTCAGCGA-CGGCGAGCGCCACTTCATCACCCACGTCCTCGC 920215 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 ||||| ||||| || ||||| |||||| || || | | || ||| | | || Sbjct 920216 CTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAACCTCGCCGGCCGCTTCACCAAAGA 920275 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 | ||| | ||||||| || ||||||||||||||| || ||||| || ||| |||| Sbjct 920276 AATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTCCAAATCGCCATCGAAAATATCCA 920335 Query 61335 CTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACG 61394 ||| || |||||||| | ||| | || || ||||||| || | ||| | || Sbjct 920336 CTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATCAAAGACTCCACAGAAAAAAATCG 920395 Query 61395 ATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAA 61454 |||| ||||| | || || || | | ||||| | |||||| || Sbjct 920396 TCTGTTTCGCGCCATAAACACCATCCCATGCATCACCAAAAAAGCCCAGTGGGCCCTCCG 920455 Query 61455 TTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGA 61514 ||||| | | | | | | || | || || | ||||||| || ||||| Sbjct 920456 CTGGAT---CGATGCCTCAGAATCCTTCGCGGAGCGCCTCGTGGCATTCGCTTGCGTCGA 920512 Query 61515 GGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTAT 61574 ||| |||| ||| ||| || ||| || |||||| | ||||| ||||| | || Sbjct 920513 GGGAATATTCTTCTCCGGAAGCTTCTGCGCGATATTTTGGCTCAAGAAGCGTGGGTTAAT 920572 Query 61575 GCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTT 61634 ||| || || |||||| ||| || | || || || || ||||| | || || || || Sbjct 920573 GCCGGGGCTCACCTTCTCCAACGAACTCATCTCGCGAGATGAGGGGCTTCACTGCGACTT 920632 Query 61635 TGCTGTTTTGCTATTCAAACGC-TATCTGG-TGAATCGTCCGTCGGAGGAGCGTGTGGGT 61692 || || | || | | ||| | || || ||| | | || |||||||| ||| | Sbjct 920633 CGC-GTGTCTCT-TGTACTCGCTTCTCAGGAAGAAGC-TTAGT--GAGGAGCGCGTGAGG 920687 Query 61693 GAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTC 61752 |||||||| ||||| ||||| || || ||| ||| || ||||| | |||| Sbjct 920688 GAGATTGTGCGTGACGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCT-TCCGTG 920746 Query 61753 T-CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCG 61811 | | | | || ||||| | | | ||| | ||||||||| |||||||| || Sbjct 920747 TGCGTTGGTGGGGATGAACGGGGAGTTGATGAGTCGGTATATTGAGTTTGTTGCGGA--- 920803 Query 61812 TCTGTTGGTCGAT----TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATT 61867 || |||| | ||| |||||| || | | | || | | | || || ||||||| Sbjct 920804 TCGGTTGCTGGATGCGCTTGGGTGTG-GGAAGGTGTACGGTGCTCAGAATCCCTTTGATT 920862 Query 61868 TCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACT 61927 ||||| | |||||||| | || || || || || || ||||| || || || || | Sbjct 920863 GGATGGAGCTTATTTCGCTTCAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGGGAGT 920922 Query 61928 ATCA 61931 | || Sbjct 920923 ACCA 920926 >seq6459 Length=330141 Score = 95.1 bits (104), Expect = 1e-14 Identities = 191/281 (68%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 61064 TGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCT 61123 ||||||| ||| | ||| | || ||| |||||||| || || ||||| || |||| Sbjct 143027 TGTTCCCAATCCAATATCCTCAAATCTGGGAAATGTACAAGAAAGCCGAAGCCTCGTTCT 143086 Query 61124 GGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG-CGTTTATCGAGC 61182 |||||| ||||||||| || | || | ||| | |||||| | | | ||| | Sbjct 143087 GGACGGCGGAGGAGGTGGACCTCTCGCAGGACCTCCGCCACTGGGCCACCCTCAGCGA-C 143145 Query 61183 GGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTC 61242 || || | || ||| | | || || | || ||||| ||||| || || || |||||| Sbjct 143146 GGCGAGCGCCACTTCGTCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTC 143205 Query 61243 AATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTC 61302 ||||| | | || ||| | ||||| | || | | ||||| || ||| Sbjct 143206 CTCGAGAACCTCGCCGGGCGCTTCACAAAGGAGATCCAGCTCCCCGAGGCCCGGGCCTTC 143265 Query 61303 TACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343 |||||||||||||| ||||| ||||| ||||||| ||||| Sbjct 143266 TACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGAT 143306 >seq19763 Length=37476 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 61192 CATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 || ||||| | || || | || ||||| ||||| || ||||| |||||| || || Sbjct 21737 CACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTAGAAAAC 21796 Query 61252 TTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTC 61311 | | || ||| | | || | ||| | ||||||| || ||||||||||||| Sbjct 21797 CTCGCCGGCCGCTTCACCAAAGAAATCCAACTCCCGGAGGCCCGCGCTTTCTACGGCTTC 21856 Query 61312 CAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || || ||||| || ||| ||||||| || |||||||| | ||| | || || |||||| Sbjct 21857 CAAATCGCCATCGAAAATATCCACTCCGAAATGTACAGCCTCCTCTTAGAAACCTACATC 21916 Query 61372 A 61372 | Sbjct 21917 A 21917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397407279408800