Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28]
75,419 sequences; 1,694,597,732 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq9 143 4e-32
seq75419 141 1e-31
seq8 136 5e-30
seq13 127 3e-27
seq1 118 1e-24
seq12 107 3e-21
seq17952 105 9e-21
seq4 100 4e-19
seq2 93.3 6e-17
seq24480 78.8 1e-12
>seq9
Length=96604005
Score = 143 bits (158), Expect = 4e-32
Identities = 178/241 (74%), Gaps = 12/241 (5%)
Strand=Plus/Minus
Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67
||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||||
Sbjct 87010203 TTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 87010145
Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127
|||||||| |||||||||||| ||| || | | ||| | | | |||| | |
Sbjct 87010144 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT- 87010088
Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187
|| || | ||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct 87010087 -------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTTC 87010036
Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGT 247
|| |||| | | | |||| |||||| |||||| || ||||||||||||||| |||
Sbjct 87010035 GACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGT 87009976
Query 248 A 248
|
Sbjct 87009975 A 87009975
Score = 143 bits (158), Expect = 4e-32
Identities = 178/241 (74%), Gaps = 12/241 (5%)
Strand=Plus/Minus
Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67
||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||||
Sbjct 92282371 TTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 92282313
Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127
|||||||| |||||||||||| ||| || | | ||| | | | |||| | |
Sbjct 92282312 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT- 92282256
Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187
|| || | ||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct 92282255 -------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTTC 92282204
Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGT 247
|| |||| | | | |||| |||||| |||||| || ||||||||||||||| |||
Sbjct 92282203 GACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGT 92282144
Query 248 A 248
|
Sbjct 92282143 A 92282143
>seq75419
Length=160230
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 111369 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 111311
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 111310 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 111264
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 111263 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 111210
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 111209 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 111150
Query 246 GTA 248
|||
Sbjct 111149 GTA 111147
Score = 141 bits (156), Expect = 1e-31
Identities = 177/243 (73%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 137562 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 137620
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 137621 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 137667
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 137668 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 137721
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 137722 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 137781
Query 246 GTA 248
|||
Sbjct 137782 GTA 137784
>seq8
Length=127390875
Score = 136 bits (150), Expect = 5e-30
Identities = 176/243 (72%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| |||||||||| || || |||||| | ||||| | ||| || ||||
Sbjct 21043545 CCTTCCGGCACTGGGCAGGCGTTAGCCCCCATACATGGTCTTAC-GACTTTGCGAAGACC 21043603
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 21043604 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 21043650
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 21043651 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 21043704
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 21043705 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCAG 21043764
Query 246 GTA 248
|||
Sbjct 21043765 GTA 21043767
Score = 129 bits (142), Expect = 8e-28
Identities = 176/242 (73%), Gaps = 14/242 (6%)
Strand=Plus/Plus
Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67
||||| || |||||||| ||||| | ||||||||| ||||| ||| ||| | ||||
Sbjct 21126709 TTCCAGCATCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 21126767
Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCA-CCAGCTCAACACGT 126
|||||||| |||||||||||| ||| || | | | ||| | || |||| | |
Sbjct 21126768 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGT---ACCGCTTTCCTAATCAAAAGAT 21126824
Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186
|| || | ||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct 21126825 --------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTT 21126875
Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246
|| | || | | | |||| |||||| |||||| || |||||||||| |||| ||
Sbjct 21126876 CGACATGGGTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCAGTTTGGGG 21126935
Query 247 TA 248
||
Sbjct 21126936 TA 21126937
Score = 116 bits (128), Expect = 5e-24
Identities = 160/224 (71%), Gaps = 20/224 (9%)
Strand=Plus/Minus
Query 25 CGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGT 84
|||||| || |||||| | ||||| | ||| || ||||||||||||| |||||||||
Sbjct 21009790 CGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACCTGTGTTTTTGGTAAACAGT 21009732
Query 85 CGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCACCAGCAGTGGCA 144
||| || || || ||||| || | || || || |||
Sbjct 21009731 CGCCCGGGCCTGGTCACTACGACCCCCT-------------TTGTG----AGGAG--GCA 21009691
Query 145 CCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAA 204
|||||||||||||||||||||||| |||||||||| ||||||| | |||| | ||
Sbjct 21009690 CCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCG 21009631
Query 205 CGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| ||| ||||||||||||| |||||||||||||||| ||||
Sbjct 21009630 CCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 21009587
Score = 91.5 bits (100), Expect = 2e-16
Identities = 85/107 (79%), Gaps = 1/107 (1%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
|||||||||||| ||||||||||||| |||||||||| |||||| | |||| |
Sbjct 12909073 GCACCCCTTCTCTTGAAGTTACGGGGCTATTTTGCCGAGTTCCTTCGAGAGAGTTGTCTT 12909132
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| || ||| ||||||||||||| |||||||||| ||||| ||||
Sbjct 12909133 GTAC-CCTAGGTATTCTCTACCTACCCACCTGTGTAGGTTTCGGGTA 12909178
Score = 77.0 bits (84), Expect = 5e-12
Identities = 81/107 (76%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201
||||| |||||||||||||||| || ||||| | || ||||||| | |||| |
Sbjct 30565352 GCACCTCTTCTCCCGAAGTTACATAGCTATTTTTCTGAGTTCCTTAGAGATAGTTATCTT 30565411
Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| || ||| |||||||||| || |||||||||||| ||| ||||
Sbjct 30565412 GCACCCCTAGGTATTCTCTAACTACCCACCTGTGTCGATTTTGGGTA 30565458
Score = 77.0 bits (84), Expect = 5e-12
Identities = 67/82 (82%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | |||| || ||| || ||||
Sbjct 54260813 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 54260755
Query 66 TGTGTTTTTAGTAAACAGTCGC 87
||||||||| ||||||||||||
Sbjct 54260754 TGTGTTTTTGGTAAACAGTCGC 54260733
>seq13
Length=144148110
Score = 127 bits (140), Expect = 3e-27
Identities = 174/243 (72%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 88401660 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 88401718
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 88401719 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 88401765
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || |||||||||||||||||||||||||| |||||| ||| |||||
Sbjct 88401766 TTGTG----AGGAGA--CACCCCTTCTCCCGAAGTTACGGGGCTATTTTGTCGAGTTCCT 88401819
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| ||||||||||| |||| |
Sbjct 88401820 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGG 88401879
Query 246 GTA 248
|||
Sbjct 88401880 GTA 88401882
>seq1
Length=147124936
Score = 118 bits (130), Expect = 1e-24
Identities = 172/243 (71%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 30409690 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 30409748
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||| | ||
Sbjct 30409749 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGATCCCCT------------- 30409795
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||| |||||||| |||||||||||| |||||||||| |||||
Sbjct 30409796 TTGTG----AGGAG--GCACCTCTTCTCCCTAAGTTACGGGGCTATTTTGCCGAGTTCCT 30409849
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| ||| ||||||||||| |
Sbjct 30409850 TAGAGAGAGTTGTCTCGTGCCCCTAGGTATTCTCTACCTACCCATTTGTGTCGGTTTCGG 30409909
Query 246 GTA 248
|||
Sbjct 30409910 GTA 30409912
Score = 77.0 bits (84), Expect = 5e-12
Identities = 80/103 (78%), Gaps = 3/103 (3%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||||| ||||||| | || ||||| ||| ||||||| | |||| |
Sbjct 55843190 GGCACCCCTTCTCCCAAAGTTACAGAGCTATTTTATCGAGTTCCTTAGAGAGAGTTGTCT 55843249
Query 201 CGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTT 242
| |||| || ||||||||||||| |||| |||||| ||||
Sbjct 55843250 C--TCGCCCTAGGTATTCTCTACCTACCCACTTGTGTCAGTTT 55843290
Score = 77.0 bits (84), Expect = 5e-12
Identities = 67/82 (82%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| |||||||| |||| || |||||| | ||||| | ||| ||| ||||
Sbjct 58270539 CCTTCCGGCACTGGGCAGGCATCAGCCCCCATACATGGTCTTAC-GACTTTGCAGAGACC 58270597
Query 66 TGTGTTTTTAGTAAACAGTCGC 87
||||||||| ||||||||||||
Sbjct 58270598 TGTGTTTTTGGTAAACAGTCGC 58270619
>seq12
Length=146008498
Score = 107 bits (118), Expect = 3e-21
Identities = 165/237 (70%), Gaps = 20/237 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| | ||||||||| || |||||| | ||||| | ||| ||| |||
Sbjct 52632287 CCTTCCGGCACTAGACAGGCGTCAACCCTCATACATGGTCTTAC-GACTTTGCAGAGACT 52632345
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||| ||||| ||| || | ||||| ||
Sbjct 52632346 TGTGTTTTTGGTAAACAGACGCTTGGGCCTAATCAGTACGACCCCC-------------- 52632391
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
|| | | || |||||||||||| || ||||||| |||| |||||||||| |||||
Sbjct 52632392 ---TTTATAA--AGAGGCACCCCTTCTTCCAAAGTTACAGGGCTATTTTGCCGAGTTCCT 52632446
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
|| | |||| | || || |||||||||||||| |||||||||||| |||
Sbjct 52632447 TAGAGAGAGTTGTCTTACACCTCTAAGTATTCTCTACCTATCCACCTGTGTCGATTT 52632503
Score = 86.0 bits (94), Expect = 9e-15
Identities = 79/100 (79%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 149 TTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCC 208
|||||||||||||| ||||| |||||| ||| ||||||| | |||| | || | ||
Sbjct 64214040 TTCTCCCGAAGTTATGGGGCTATTTTGTCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCC 64214099
Query 209 TTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| ||||||||||||| |||||| ||||||||| ||||
Sbjct 64214100 TAGGTATTCTCTACCTACCCACCTATGTCGGTTTCGGGTA 64214139
>seq17952
Length=119951
Score = 105 bits (116), Expect = 9e-21
Identities = 88/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
||||||||||||||| ||||||| |||| |||||||||| ||||||| | |||| |
Sbjct 77789 GGCACCCCTTCTCCCAAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 77848
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| || ||| ||||||||||||| ||||||||||| |||| ||||
Sbjct 77849 CGCACCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGGGTA 77896
>seq4
Length=137675496
Score = 100 bits (110), Expect = 4e-19
Identities = 134/187 (72%), Gaps = 21/187 (11%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| ||| ||||
Sbjct 27199559 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCAAAGACC 27199617
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||||||||||| || || |||||||| | |
Sbjct 27199618 TGTGTTTTTGGTAAACAGTCGCTCGGACCTGGTCACTGCGACC-------------CCCT 27199664
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA-ATTCC 184
| || | | |||||||||||||||||||||||||||| |||||||| | | ||
Sbjct 27199665 TTGT------GAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCAAGAATCT 27199718
Query 185 TTAACCA 191
||| |||
Sbjct 27199719 TTATCCA 27199725
Score = 84.2 bits (92), Expect = 3e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | | || |
Sbjct 70830848 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGATTTGTCT 70830789
Query 201 CGAACGCCTTAGTATTCTCTACCT 224
|| | ||| |||||||||||||
Sbjct 70830788 CGCGCCCCTAGGTATTCTCTACCT 70830765
>seq2
Length=101023042
Score = 93.3 bits (102), Expect = 6e-17
Identities = 150/216 (69%), Gaps = 20/216 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||| ||||||||| || || ||| | ||||| | ||| || ||||
Sbjct 18108249 CCTTCCGGCACTGGGTAGGCGTCAGCCCCCATGCATAGTCTTAC-GACTTTGCGGAGACC 18108191
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 18108190 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 18108144
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||||||||||||||||||||||||||| ||||| |||| ||| |
Sbjct 18108143 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTACCGAGTTCAT 18108090
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTA 221
|| | |||| | || | ||| ||||||||||
Sbjct 18108089 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTA 18108054
>seq24480
Length=72741
Score = 78.8 bits (86), Expect = 1e-12
Identities = 82/108 (76%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||| | ||||||| ||||||| ||| |||||||| | ||||||| | |||| |
Sbjct 26489 GGCAACTCTTCTCCTAAAGTTACAAGGCTATTTTGCCTAGTTCCTTAGAGAGAGTTGTCT 26548
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| || ||| |||||||||||||| |||| |||||| |||| ||||
Sbjct 26549 CACACCCCTAAGTATTCTCTACCTACCCACTTGTGTCAGTTTCGGGTA 26596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693892656387
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