Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28] 75,419 sequences; 1,694,597,732 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq9 143 4e-32 seq75419 141 1e-31 seq8 136 5e-30 seq13 127 3e-27 seq1 118 1e-24 seq12 107 3e-21 seq17952 105 9e-21 seq4 100 4e-19 seq2 93.3 6e-17 seq24480 78.8 1e-12 >seq9 Length=96604005 Score = 143 bits (158), Expect = 4e-32 Identities = 178/241 (74%), Gaps = 12/241 (5%) Strand=Plus/Minus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | |||| Sbjct 87010203 TTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 87010145 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127 |||||||| |||||||||||| ||| || | | ||| | | | |||| | | Sbjct 87010144 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT- 87010088 Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187 || || | ||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct 87010087 -------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTTC 87010036 Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGT 247 || |||| | | | |||| |||||| |||||| || ||||||||||||||| ||| Sbjct 87010035 GACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGT 87009976 Query 248 A 248 | Sbjct 87009975 A 87009975 Score = 143 bits (158), Expect = 4e-32 Identities = 178/241 (74%), Gaps = 12/241 (5%) Strand=Plus/Minus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | |||| Sbjct 92282371 TTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 92282313 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTC 127 |||||||| |||||||||||| ||| || | | ||| | | | |||| | | Sbjct 92282312 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT- 92282256 Query 128 GTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTA 187 || || | ||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct 92282255 -------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTTC 92282204 Query 188 ACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGT 247 || |||| | | | |||| |||||| |||||| || ||||||||||||||| ||| Sbjct 92282203 GACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGT 92282144 Query 248 A 248 | Sbjct 92282143 A 92282143 >seq75419 Length=160230 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 111369 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 111311 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 111310 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 111264 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 111263 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 111210 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 111209 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 111150 Query 246 GTA 248 ||| Sbjct 111149 GTA 111147 Score = 141 bits (156), Expect = 1e-31 Identities = 177/243 (73%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 137562 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 137620 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 137621 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 137667 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 137668 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 137721 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 137722 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 137781 Query 246 GTA 248 ||| Sbjct 137782 GTA 137784 >seq8 Length=127390875 Score = 136 bits (150), Expect = 5e-30 Identities = 176/243 (72%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| |||||||||| || || |||||| | ||||| | ||| || |||| Sbjct 21043545 CCTTCCGGCACTGGGCAGGCGTTAGCCCCCATACATGGTCTTAC-GACTTTGCGAAGACC 21043603 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 21043604 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 21043650 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 21043651 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 21043704 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 21043705 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCAG 21043764 Query 246 GTA 248 ||| Sbjct 21043765 GTA 21043767 Score = 129 bits (142), Expect = 8e-28 Identities = 176/242 (73%), Gaps = 14/242 (6%) Strand=Plus/Plus Query 8 TTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTG 67 ||||| || |||||||| ||||| | ||||||||| ||||| ||| ||| | |||| Sbjct 21126709 TTCCAGCATCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTG 21126767 Query 68 TGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCA-CCAGCTCAACACGT 126 |||||||| |||||||||||| ||| || | | | ||| | || |||| | | Sbjct 21126768 TGTTTTTAATAAACAGTCGCTACCCCCTGGTATGT---ACCGCTTTCCTAATCAAAAGAT 21126824 Query 127 CGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186 || || | ||||||||||||||| ||||||||| ||||||||||| |||||| Sbjct 21126825 --------AGGAGAG-CACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTCCTT 21126875 Query 187 AACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGG 246 || | || | | | |||| |||||| |||||| || |||||||||| |||| || Sbjct 21126876 CGACATGGGTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCAGTTTGGGG 21126935 Query 247 TA 248 || Sbjct 21126936 TA 21126937 Score = 116 bits (128), Expect = 5e-24 Identities = 160/224 (71%), Gaps = 20/224 (9%) Strand=Plus/Minus Query 25 CGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGT 84 |||||| || |||||| | ||||| | ||| || ||||||||||||| ||||||||| Sbjct 21009790 CGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACCTGTGTTTTTGGTAAACAGT 21009732 Query 85 CGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCACCAGCAGTGGCA 144 ||| || || || ||||| || | || || || ||| Sbjct 21009731 CGCCCGGGCCTGGTCACTACGACCCCCT-------------TTGTG----AGGAG--GCA 21009691 Query 145 CCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAA 204 |||||||||||||||||||||||| |||||||||| ||||||| | |||| | || Sbjct 21009690 CCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCG 21009631 Query 205 CGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 21009630 CCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 21009587 Score = 91.5 bits (100), Expect = 2e-16 Identities = 85/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 |||||||||||| ||||||||||||| |||||||||| |||||| | |||| | Sbjct 12909073 GCACCCCTTCTCTTGAAGTTACGGGGCTATTTTGCCGAGTTCCTTCGAGAGAGTTGTCTT 12909132 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || ||| ||||||||||||| |||||||||| ||||| |||| Sbjct 12909133 GTAC-CCTAGGTATTCTCTACCTACCCACCTGTGTAGGTTTCGGGTA 12909178 Score = 77.0 bits (84), Expect = 5e-12 Identities = 81/107 (76%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCC 201 ||||| |||||||||||||||| || ||||| | || ||||||| | |||| | Sbjct 30565352 GCACCTCTTCTCCCGAAGTTACATAGCTATTTTTCTGAGTTCCTTAGAGATAGTTATCTT 30565411 Query 202 GAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || ||| |||||||||| || |||||||||||| ||| |||| Sbjct 30565412 GCACCCCTAGGTATTCTCTAACTACCCACCTGTGTCGATTTTGGGTA 30565458 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | |||| || ||| || |||| Sbjct 54260813 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGGAGACC 54260755 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 ||||||||| |||||||||||| Sbjct 54260754 TGTGTTTTTGGTAAACAGTCGC 54260733 >seq13 Length=144148110 Score = 127 bits (140), Expect = 3e-27 Identities = 174/243 (72%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 88401660 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 88401718 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 88401719 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 88401765 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || |||||||||||||||||||||||||| |||||| ||| ||||| Sbjct 88401766 TTGTG----AGGAGA--CACCCCTTCTCCCGAAGTTACGGGGCTATTTTGTCGAGTTCCT 88401819 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| ||||||||||| |||| | Sbjct 88401820 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGG 88401879 Query 246 GTA 248 ||| Sbjct 88401880 GTA 88401882 >seq1 Length=147124936 Score = 118 bits (130), Expect = 1e-24 Identities = 172/243 (71%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 30409690 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 30409748 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||| | || Sbjct 30409749 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGATCCCCT------------- 30409795 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||| |||||||| |||||||||||| |||||||||| ||||| Sbjct 30409796 TTGTG----AGGAG--GCACCTCTTCTCCCTAAGTTACGGGGCTATTTTGCCGAGTTCCT 30409849 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| ||| ||||||||||| | Sbjct 30409850 TAGAGAGAGTTGTCTCGTGCCCCTAGGTATTCTCTACCTACCCATTTGTGTCGGTTTCGG 30409909 Query 246 GTA 248 ||| Sbjct 30409910 GTA 30409912 Score = 77.0 bits (84), Expect = 5e-12 Identities = 80/103 (78%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||||| ||||||| | || ||||| ||| ||||||| | |||| | Sbjct 55843190 GGCACCCCTTCTCCCAAAGTTACAGAGCTATTTTATCGAGTTCCTTAGAGAGAGTTGTCT 55843249 Query 201 CGAACGCCTTA-GTATTCTCTACCTGACCACCTGTGTCGGTTT 242 | |||| || ||||||||||||| |||| |||||| |||| Sbjct 55843250 C--TCGCCCTAGGTATTCTCTACCTACCCACTTGTGTCAGTTT 55843290 Score = 77.0 bits (84), Expect = 5e-12 Identities = 67/82 (82%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| |||||||| |||| || |||||| | ||||| | ||| ||| |||| Sbjct 58270539 CCTTCCGGCACTGGGCAGGCATCAGCCCCCATACATGGTCTTAC-GACTTTGCAGAGACC 58270597 Query 66 TGTGTTTTTAGTAAACAGTCGC 87 ||||||||| |||||||||||| Sbjct 58270598 TGTGTTTTTGGTAAACAGTCGC 58270619 >seq12 Length=146008498 Score = 107 bits (118), Expect = 3e-21 Identities = 165/237 (70%), Gaps = 20/237 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| | ||||||||| || |||||| | ||||| | ||| ||| ||| Sbjct 52632287 CCTTCCGGCACTAGACAGGCGTCAACCCTCATACATGGTCTTAC-GACTTTGCAGAGACT 52632345 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||| ||||| ||| || | ||||| || Sbjct 52632346 TGTGTTTTTGGTAAACAGACGCTTGGGCCTAATCAGTACGACCCCC-------------- 52632391 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || | | || |||||||||||| || ||||||| |||| |||||||||| ||||| Sbjct 52632392 ---TTTATAA--AGAGGCACCCCTTCTTCCAAAGTTACAGGGCTATTTTGCCGAGTTCCT 52632446 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | |||| | || || |||||||||||||| |||||||||||| ||| Sbjct 52632447 TAGAGAGAGTTGTCTTACACCTCTAAGTATTCTCTACCTATCCACCTGTGTCGATTT 52632503 Score = 86.0 bits (94), Expect = 9e-15 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 149 TTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCC 208 |||||||||||||| ||||| |||||| ||| ||||||| | |||| | || | || Sbjct 64214040 TTCTCCCGAAGTTATGGGGCTATTTTGTCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCC 64214099 Query 209 TTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | ||||||||||||| |||||| ||||||||| |||| Sbjct 64214100 TAGGTATTCTCTACCTACCCACCTATGTCGGTTTCGGGTA 64214139 >seq17952 Length=119951 Score = 105 bits (116), Expect = 9e-21 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 ||||||||||||||| ||||||| |||| |||||||||| ||||||| | |||| | Sbjct 77789 GGCACCCCTTCTCCCAAAGTTACAGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 77848 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || || ||| ||||||||||||| ||||||||||| |||| |||| Sbjct 77849 CGCACCCCTAGGTATTCTCTACCTACCCACCTGTGTCAGTTTCGGGTA 77896 >seq4 Length=137675496 Score = 100 bits (110), Expect = 4e-19 Identities = 134/187 (72%), Gaps = 21/187 (11%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| ||| |||| Sbjct 27199559 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCAAAGACC 27199617 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| ||||||||||||| || || |||||||| | | Sbjct 27199618 TGTGTTTTTGGTAAACAGTCGCTCGGACCTGGTCACTGCGACC-------------CCCT 27199664 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA-ATTCC 184 | || | | |||||||||||||||||||||||||||| |||||||| | | || Sbjct 27199665 TTGT------GAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCAAGAATCT 27199718 Query 185 TTAACCA 191 ||| ||| Sbjct 27199719 TTATCCA 27199725 Score = 84.2 bits (92), Expect = 3e-14 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | | || | Sbjct 70830848 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGATTTGTCT 70830789 Query 201 CGAACGCCTTAGTATTCTCTACCT 224 || | ||| ||||||||||||| Sbjct 70830788 CGCGCCCCTAGGTATTCTCTACCT 70830765 >seq2 Length=101023042 Score = 93.3 bits (102), Expect = 6e-17 Identities = 150/216 (69%), Gaps = 20/216 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||| ||||||||| || || ||| | ||||| | ||| || |||| Sbjct 18108249 CCTTCCGGCACTGGGTAGGCGTCAGCCCCCATGCATAGTCTTAC-GACTTTGCGGAGACC 18108191 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 18108190 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCT------------- 18108144 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||||||||||||||||||||||||||| ||||| |||| ||| | Sbjct 18108143 TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTACCGAGTTCAT 18108090 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTA 221 || | |||| | || | ||| |||||||||| Sbjct 18108089 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTA 18108054 >seq24480 Length=72741 Score = 78.8 bits (86), Expect = 1e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||| | ||||||| ||||||| ||| |||||||| | ||||||| | |||| | Sbjct 26489 GGCAACTCTTCTCCTAAAGTTACAAGGCTATTTTGCCTAGTTCCTTAGAGAGAGTTGTCT 26548 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | || ||| |||||||||||||| |||| |||||| |||| |||| Sbjct 26549 CACACCCCTAAGTATTCTCTACCTACCCACTTGTGTCAGTTTCGGGTA 26596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693892656387