Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28]
75,419 sequences; 1,694,597,732 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq75419 183 6e-44
seq13 183 6e-44
seq8 183 6e-44
seq6 183 6e-44
seq2 178 3e-42
seq4 174 3e-41
seq1 165 2e-38
seq12 159 7e-37
seq64250 143 5e-32
seq7 114 3e-23
seq9 113 9e-23
seq11 73.4 8e-11
>seq75419
Length=160230
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 111748 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 111807
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 111808 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 111866
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 111867 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 111926
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 111927 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 111976
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 137183 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 137124
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 137123 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 137065
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 137064 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 137005
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 137004 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 136955
>seq13
Length=144148110
Score = 183 bits (202), Expect = 6e-44
Identities = 185/238 (78%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 105 GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAAC 164
||||| | |||||| |||| | |||||| ||||||| |||||||||| |||||
Sbjct 73502676 GTTGA-GAGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAAC 73502734
Query 165 GGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAAC---CATGCGCACAGTGCAAAGGC 221
||||||| ||||| | |||||| ||| ||| | | | || |||||||||||
Sbjct 73502735 GGAGGCGTGCAAAGGTTTCCTCAGGCCGGACGGAGATTGGCCTTCG---AGTGCAAAGGC 73502791
Query 222 AAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281
| ||||| | |||||||| | |||| | ||| ||||||||||||||| || ||||||||
Sbjct 73502792 AGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTTGGCCTTAATGA 73502851
Query 282 TCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||| |||||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 73502852 TCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 73502909
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 88409661 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAAGCCTCCCAAAAGGTAACGGAGGC 88409602
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | | ||| ||| | || | | |||||||||||| |||||
Sbjct 88409601 GTGCAAAGGTTTCCTCGGGTCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 88409543
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | || |||||||||||||||||| |||| ||||||| |||
Sbjct 88409542 GCTTGACTGCAAGACCCACCCATCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 88409483
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 88409482 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 88409433
Score = 174 bits (192), Expect = 3e-41
Identities = 178/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||| ||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 88401281 GGGATAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 88401222
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 88401221 ATGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 88401163
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 88401162 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 88401103
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 88401102 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 88401053
>seq8
Length=127390875
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 21010161 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 21010220
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 21010221 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 21010279
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 21010280 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 21010339
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 21010340 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 21010389
Score = 168 bits (186), Expect = 1e-39
Identities = 177/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||| ||||||
Sbjct 21043165 GGGACAGTCTCAGGTAGACAGTTTCCATGGGGCGTAGGCCTCCCAAAAGGTAATGGAGGC 21043106
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 21043105 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 21043047
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||| | |||| ||||||| |||
Sbjct 21043046 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCTGCCTTAGTGATCCGACGG 21042987
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||| ||||| ||||||||||| | ||||||||| ||| || ||||||
Sbjct 21042986 TGATGAGTGGAAGGGCCGTCGCTCAATGGATAAAAGTTACTCTAGGGATA 21042937
Score = 156 bits (172), Expect = 8e-36
Identities = 174/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 21114344 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 21114403
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 21114404 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 21114462
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | || |||||||| |||||| || |||| | ||||| |||
Sbjct 21114463 GCTTGACTGCAAGACCCACCCTTCGAGCAGGGAAGAAAGTTGGCCTTAGTTATCCGACGG 21114522
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| || || |||||
Sbjct 21114523 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTGACTCTAAGGATA 21114572
Score = 102 bits (112), Expect = 2e-19
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
||||||| || || ||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct 21126352 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 21126293
Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228
| | ||| || |||| ||| ||| | || || | || || | |||
Sbjct 21126292 TGTACGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 21126238
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
|| |||||| || ||| | ||| | ||| |||||||||||| | || ||||| ||
Sbjct 21126237 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCTGGGA 21126178
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 21126177 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 21126127
Score = 93.3 bits (102), Expect = 8e-17
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||| | |||||||| | |||| | | | |||||| |||||||
Sbjct 30561978 AGTGCAAAGGCAGAAGAAAGCTTGACTGCAAGACCCACCTATTGAACAGGGATGAAAGTC 30561919
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| |||| ||||| | |||||||| ||||| |||| |||||| | ||||||| |||
Sbjct 30561918 AGCCTTAGTGATCTGATGGTGCTGAGTGGAAGGGCCATCGCTCAATAGATAAAACTTACT 30561859
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 30561858 CTAGGGATA 30561850
Score = 93.3 bits (102), Expect = 8e-17
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | ||| |||| | |||| | ||| ||||||||| |||||
Sbjct 30626265 AGTGCAAAGGCAGAAGGGAGCTTGCCTGCAAGACCCACTCGTCAAGCAGGGACAAAAGTT 30626324
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| |||| |||||| | | | || ||||| |||| ||||| || |||| ||| |||
Sbjct 30626325 AGCCTTAGTGATCCAACAATACCGAGTGGAAAGGCCTTCGCTGAACAGATAGAAGTTACT 30626384
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 30626385 CTAGGGATA 30626393
>seq6
Length=121339338
Score = 183 bits (202), Expect = 6e-44
Identities = 180/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 41097331 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 41097390
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 41097391 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 41097449
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 41097450 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 41097509
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 41097510 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 41097559
>seq2
Length=101023042
Score = 178 bits (196), Expect = 3e-42
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 18108628 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 18108687
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 18108688 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 18108746
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||
Sbjct 18108747 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGATGG 18108806
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 18108807 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 18108856
Score = 158 bits (174), Expect = 2e-36
Identities = 151/191 (79%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCA 209
|||||||| |||||||||||| ||||| | |||| | ||| ||| | || |
Sbjct 18094373 CTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCT 18094315
Query 210 C-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268
| |||||||||||| ||||| | |||||||| | |||| | ||| |||||||| |||||
Sbjct 18094314 CGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGATGAAAG 18094255
Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328
|||| |||| ||||||| |||||| || ||||| ||||||||||| ||||||||||| ||
Sbjct 18094254 TCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTA 18094195
Query 329 CCCTGGGGATA 339
| || ||||||
Sbjct 18094194 CTCTAGGGATA 18094184
Score = 78.8 bits (86), Expect = 2e-12
Identities = 73/93 (78%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|||||||| | |||| | ||| | |||||||||||||||| |||| |||||| |||
Sbjct 99996127 TTGACTGCAAGACCCACCCGTCGAACAGGGACGAAAGTCGGCCTTAGTGATCCAAAGGTA 99996186
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAA 324
| | ||||| |||| || ||| ||||||||||
Sbjct 99996187 CCAAGTGGAAGGGCCATCACTCAACGGATAAAA 99996219
>seq4
Length=137675496
Score = 174 bits (192), Expect = 3e-41
Identities = 175/225 (78%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 116 AGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCA 175
||| |||| | |||||| ||||||| |||||||||| |||||||||||| ||
Sbjct 75393665 AGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCA 75393606
Query 176 AAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTG 234
||| | |||| | ||| ||| | || | | |||||||||||| ||||| | |||
Sbjct 75393605 AAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGAGCTTG 75393547
Query 235 ACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTG 294
||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||||| |
Sbjct 75393546 ACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCG 75393487
Query 295 AATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 75393486 AGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 75393442
Score = 158 bits (174), Expect = 2e-36
Identities = 153/194 (79%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 138 TGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGG 197
||||||| |||||||||| |||||||||||| |||| | |||| | ||| ||
Sbjct 129457745 TGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAAGTTTCCTCGGGCCGGACGG 129457804
Query 198 AAACCATGCGCAC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCT 254
||| || || | |||||||||||| ||||| | |||||||| | ||| | ||||
Sbjct 129457805 AAAT--TG-GCCCTTGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACCAGTCG 129457861
Query 255 AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCG 314
|||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||||||
Sbjct 129457862 AGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCA 129457921
Query 315 ACGGATAAAAGCTA 328
||||||||||| ||
Sbjct 129457922 ACGGATAAAAGTTA 129457935
Score = 125 bits (138), Expect = 1e-26
Identities = 105/129 (81%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | |||||||| | |||| | ||| ||||||||||||||||
Sbjct 526771 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTC 526830
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| |||| ||||||| | ||| || ||||| |||||| |||| | ||||||||| |||
Sbjct 526831 GGCCTTAGTGATCCGACACTGCCGAGTGGAAGGGCCGTTGCTCAATGGATAAAAGTTACT 526890
Query 331 CTGGGGATA 339
|| |||||
Sbjct 526891 CTAAGGATA 526899
>seq1
Length=147124936
Score = 165 bits (182), Expect = 2e-38
Identities = 176/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||| | |||| | |||||| ||| ||| |||||||||| |||||||||||
Sbjct 30409311 GGGACAATCTCAGGTAGACAGTTTCTATGGTGCGTAGGCCTCCCAAAAGGTAACGGAGGC 30409252
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAG-TGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | || |||||||||| ||||
Sbjct 30409251 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCAAATGCAAAGGCAGCAGGGA 30409193
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||| | |||
Sbjct 30409192 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCTGACGG 30409133
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||||||||||||||| ||||||||||| ||| || ||||||
Sbjct 30409132 TGCCGAGTGGAACGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 30409083
Score = 156 bits (172), Expect = 8e-36
Identities = 174/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||| | |||||||||| |||||||||||
Sbjct 58270160 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGTGTAGGCCTCCCAAAAGGTAACGGAGGC 58270101
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
| ||||| | |||| | ||| ||| | || | | |||||||||||| |||||
Sbjct 58270100 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 58270042
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||| |||||||| |||| ||||||| ||
Sbjct 58270041 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGATGAAAGTCGACCTTAGTGATCCGACGA 58269982
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || | ||| |||| |||||| ||||||||||| ||| || ||||||
Sbjct 58269981 TGCCGAGTAGAAGGGCCATCGCTCAACGGATAAAAGTTACTCTAGGGATA 58269932
Score = 123 bits (136), Expect = 5e-26
Identities = 169/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| || ||| |||||| |||||||||| |||| ||||||
Sbjct 55842696 GGGACAGTCTCAGGTAAACAATTTCTACGGGGCGTAGGCCTCCCAAAAGGTAATGGAGGC 55842637
Query 171 GCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGG 228
| ||||| | | || |||| ||| || | || | | |||||||||||| |||||
Sbjct 55842636 GTGCAAAGGTTTCTTCGAGCT-GGACAGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGG 55842579
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
| |||||||| | ||| | ||| || | |||| ||||| || |||| || |||| ||
Sbjct 55842578 AGCTTGACTGCAAGACCTACCTGTCGAGTAAGGACAAAAGTTGGCCTTAGTGGTCCGACG 55842519
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||| ||||||| ||| ||||||| ||| ||||||| ||| || ||||||
Sbjct 55842518 GTGCCAAATGGAAGGGCTGTCGCTCAACGAATAAAAGTTACTCTAGGGATA 55842468
>seq12
Length=146008498
Score = 159 bits (176), Expect = 7e-37
Identities = 177/232 (76%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| ||||| |||| |||||||||||
Sbjct 62467962 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCTCAAAAGGTAACGGAGGC 62468021
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC---AGTGCAAAGGCAAAAGG 227
| ||||| | |||||| ||| ||| | || || | |||||||||||| ||||
Sbjct 62468022 GTGCAAAGGTTTCCTCAGGCCGGACGGAGAT--TG-GCCCTTGAGTGCAAAGGCAGAAGG 62468078
Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287
| | |||||| | |||| | || |||||||| ||||||||| |||| ||||||| |
Sbjct 62468079 GAGCTTGACTATAAGACCCACCCTTCGAGCAGGGATGAAAGTCGGCCTTAGTGATCCGAC 62468138
Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||||| ||||| ||||||||||| ||||||||||| || || ||||||
Sbjct 62468139 GGTGCTGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTA-TCTAGGGATA 62468189
Score = 122 bits (134), Expect = 2e-25
Identities = 91/107 (85%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||||||
Sbjct 10553464 TGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGC 10553405
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 10553404 CGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 10553358
Score = 107 bits (118), Expect = 4e-21
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | || ||||| | |||| | ||||||| |||||||||||
Sbjct 98154405 AGTGCAAAGGCAGAAGGGAGCTTAACTGCAAGACCCACCCATCTAGCAAGGACGAAAGTC 98154346
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| |||| | ||| | ||||| || ||||| ||||||| ||| ||| ||||||| |||
Sbjct 98154345 AGCCTTATTAATCTAGAGGTGCCGAGTGGAAAGGCCGTCACTCAACGAATAAAAGTTACT 98154286
Query 331 CTGGGGATA 339
|| |||||
Sbjct 98154285 CTAAGGATA 98154277
>seq64250
Length=210
Score = 143 bits (158), Expect = 5e-32
Identities = 109/129 (84%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||||||||||| ||||| | |||||||| | |||| | ||| ||||||||||||||||
Sbjct 198 AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTC 139
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
|| ||| ||||||| |||||| || ||||| |||| |||||| ||||||||||| |||
Sbjct 138 GGCGTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCATCGCTCAACGGATAAAAGTTACT 79
Query 331 CTGGGGATA 339
|||||||||
Sbjct 78 CTGGGGATA 70
>seq7
Length=127721098
Score = 114 bits (126), Expect = 3e-23
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| ||| | |||||| ||||||| ||| |||| ||||| ||||
Sbjct 37564250 GGGACAGTCTCAAGTAGACAGTTTCTATGGGGCGTAGATCTCTCAAAAGGTAACAAAGGC 37564309
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
||||| | |||| || ||| ||| | || | | |||||||||||| ||| |
Sbjct 37564310 ATGCAAAGGTTTCCTCGGCCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGAGA 37564368
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||| ||| | |||| | || |||| |||| |||||||| |||| ||||| | | |
Sbjct 37564369 GCTTGATTGCAAGACCCACCTGTTGAGCAAGGACAAAAGTCGGCCTTAGTGATCTGACAG 37564428
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| | ||||| ||| ||||||| ||||||||||| ||| || ||||||
Sbjct 37564429 TGCCAAGTGGAAGGGCAGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 37564478
Score = 107 bits (118), Expect = 4e-21
Identities = 77/89 (87%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 251 GTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCG 310
||| |||||||||||||||||| |||| ||||| | | ||||||| ||||| ||||||||
Sbjct 59714325 GTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCTGACAGTGCTGAGTGGAAGGGCCGTCG 59714266
Query 311 CTCGACGGATAAAAGCTACCCTGGGGATA 339
||| ||||||||||| ||| || ||||||
Sbjct 59714265 CTCAACGGATAAAAGTTACTCTAGGGATA 59714237
>seq9
Length=96604005
Score = 113 bits (124), Expect = 9e-23
Identities = 83/97 (86%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 243 ACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAAC 302
|||| | ||| |||||||||||||||||| |||| ||||||| |||||| || |||||
Sbjct 93803825 ACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAG 93803884
Query 303 GGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||||||||| ||||||||||| ||| || ||||||
Sbjct 93803885 GGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 93803921
Score = 107 bits (118), Expect = 4e-21
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169
||||||| || || ||| ||||| ||||||||| |||||| |||||||||||||||
Sbjct 92282730 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 92282789
Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228
| | ||| || |||| ||| ||| | || || | || || | |||
Sbjct 92282790 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 92282844
Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288
|| |||||| || ||| | ||| | ||| |||||||||||| | || ||||||||
Sbjct 92282845 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 92282904
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 92282905 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 92282955
Score = 96.9 bits (106), Expect = 7e-18
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||| || || ||| ||||| ||||||||| |||||| |||||||||| ||||
Sbjct 87010561 GGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACAGAGGT 87010620
Query 171 GCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGT 229
| | ||| || |||| ||| ||| | || || | || || | ||| |
Sbjct 87010621 GTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCCT 87010675
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||| || ||| ||| | ||| |||||||||||| | || |||||||| |
Sbjct 87010676 GCCTGACTGTGAGACCGATTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGAG 87010735
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | | ||||| ||| |||||| |||||| |||| ||| | |||||||
Sbjct 87010736 TCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 87010785
>seq11
Length=105699404
Score = 73.4 bits (80), Expect = 8e-11
Identities = 85/115 (74%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||| ||||| | || || | ||| || | | |||| | || || |||||||||||||
Sbjct 46207696 AGTGAAAAGGAAGAAAGGAGCTTGGCTACAAGACCCGCTCGTTGAGTAGGGACGAAAGTC 46207637
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325
||||||| ||| ||||| ||||||| || | |||||| || ||||||||
Sbjct 46207636 AACCTTAATGTTCCAATGGTGCCAAATGGAAGGGTCATCGCTCAACAGATAAAAG 46207582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981659083744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |