Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28]
75,419 sequences; 1,694,597,732 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq75419 163 5e-38
seq6 163 5e-38
seq5 163 5e-38
seq4 163 5e-38
seq8 145 1e-32
seq2 145 1e-32
seq1 140 5e-31
seq13 134 2e-29
seq12 105 1e-20
seq10 105 1e-20
seq35480 102 1e-19
seq17288 96.9 6e-18
seq73508 95.1 2e-17
seq9 93.3 7e-17
seq7 84.2 4e-14
seq73295 82.4 1e-13
seq3 75.2 2e-11
>seq75419
Length=160230
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 106295 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 106236
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 106235 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 106176
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 106175 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 106116
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 106115 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 106056
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 106055 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 106011
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 142636 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 142695
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 142696 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 142755
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 142756 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 142815
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 142816 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 142875
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 142876 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 142920
>seq6
Length=121339338
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 44947653 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 44947594
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| ||||||| | | |||| ||
Sbjct 44947593 CCGATCTCTACGCATTTCACCGCTCCACCAGAAATTCCCTCTGCCTCTACCGTACTCCAG 44947534
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | ||| | ||||||||||| | ||| || | |||||
Sbjct 44947533 CTTGGTAGTTTCCACTGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 44947474
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 44947473 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 44947414
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| ||||||||||||| |||||||| ||||||||| ||| ||
Sbjct 44947413 CCACGGCTGCTGGCACAGAGTTAGCCAATGCTTATTCCCCAGATA 44947369
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 44955636 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 44955577
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 44955576 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 44955517
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | ||| | ||||||||||| | ||| ||| | |||||
Sbjct 44955516 CTTGGTAGTTTCCACTGCCTGTCCAGGGTTGAGCCCTGGGATTTGACAGCGGACTTAAAA 44955457
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| ||||| | |||||||||||||||| ||| ||||||
Sbjct 44955456 AGCCACCTACAGACGCTTTACGTCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 44955397
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 44955396 TCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 44955352
Score = 107 bits (118), Expect = 3e-21
Identities = 190/277 (69%), Gaps = 0/277 (0%)
Strand=Plus/Plus
Query 7 CTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCC 66
|||||| ||||| |||||| | | |||||| || || || |||||||| | |
Sbjct 94057229 CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTACCGTTGGTGTTCTTTC 94057288
Query 67 GTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGA 126
|| |||||||||||||| ||| || | |||||| | || || | |||| ||
Sbjct 94057289 CGATCTCTACGCATTTCACTGCTCCATCGGAAATTCCCTCTACCCCTACCATACTCCAGC 94057348
Query 127 AAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTT 186
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 94057349 TTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCAGACTTAAAAA 94057408
Query 187 CCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTAC 246
|| |||||| |||||| |||||| | ||||||||||| |||| | | |||||||
Sbjct 94057409 GCCACCTACAGAATCTTTACGCCCAATCATTCCGGATAACGTTTGCATCTTCTGTATTAC 94057468
Query 247 CGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
||| ||||||| ||| ||||||||| |||||||||
Sbjct 94057469 CGCAGCTGCTGACACAGAGTTAGCCGATGCTTATTCC 94057505
>seq5
Length=59691364
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 1154099 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 1154158
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 1154159 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 1154218
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 1154219 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 1154278
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 1154279 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 1154338
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 1154339 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 1154383
>seq4
Length=137675496
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 136623680 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 136623621
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 136623620 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 136623561
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 136623560 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 136623501
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 136623500 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 136623441
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 136623440 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 136623396
Score = 84.2 bits (92), Expect = 4e-14
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103
|| |||||| |||||||| | | || |||| ||||||||||||| ||| | ||||||
Sbjct 116478423 GCTTTCGCCGTTGGTGTTCTTTCCGATCTCTAAGCATTTCACCGCTCCACCAGAAATTCC 116478482
Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAG-TTTCAAATGCAGGCTATGGGTTGAGCCCA 162
|||| || | | |||| || || ||||| | | ||| |||||||||||
Sbjct 116478483 CTCTGCCCCTACTGTACTCCAGCTTGGTAGTTTTCACCGCCTGTCTA-GGGTTGAGCCCT 116478541
Query 163 TAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGA 222
| ||| || | ||||| || |||||| | |||||| |||||| | ||||||
Sbjct 116478542 GGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGA 116478601
Query 223 TAACGCTTGC 232
||||||||||
Sbjct 116478602 TAACGCTTGC 116478611
>seq8
Length=127390875
Score = 145 bits (160), Expect = 1e-32
Identities = 203/285 (71%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| || || |||||| | | |||||| || || ||| |||||| | |
Sbjct 21004765 GCTTTCGTCTCTTAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTGCCGTTGGTGTCCTTT 21004706
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||| ||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 21004705 CCGATCTCTACGTATTTCACCGCTCCACCAGAAATTCCCTCTGCCCCTACCGTACTCCAG 21004646
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 21004645 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 21004586
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 21004585 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 21004526
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 21004525 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 21004481
Score = 129 bits (142), Expect = 1e-27
Identities = 197/281 (70%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | ||| || || || ||| |||||||| |
Sbjct 21048623 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAACAGAGTGCTTTTGCCGTTGGTGTTCTTT 21048682
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
|| |||||||||||||||||| ||| | |||||| |||| || | |||| |
Sbjct 21048683 TCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCATACTCCAA 21048742
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || |||||
Sbjct 21048743 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGTGGACTTAAAA 21048802
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | || ||||||||||||| ||| ||||||
Sbjct 21048803 AGCCACCTACAGACGCTTTACGCCCAATCATTCTGGATAACGCTTGCATCCTCTGTATTA 21048862
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286
|||||||||||||||| ||||||||| ||||||||| ||
Sbjct 21048863 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCA 21048903
>seq2
Length=101023042
Score = 145 bits (160), Expect = 1e-32
Identities = 203/285 (71%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 60422123 GCTTTCGTATCTCAGTGTCAGTGTCAGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 60422064
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| |||||| |||| || | | |||| |
Sbjct 60422063 CTGATCTCTACGCATTTCACCGCTCCACCAAAAATTCCTTCTGCCCCTGCTGTACTCCAA 60422004
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 60422003 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 60421944
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
| |||||| | |||||| |||||| |||||| ||||||||||| ||| ||||||
Sbjct 60421943 AGCAACCTACAGACGCTTTACGCCCAATCAATCCGAATAACGCTTGCATCCTCTGTATTA 60421884
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| |||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 60421883 CTGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 60421839
Score = 141 bits (156), Expect = 2e-31
Identities = 200/281 (71%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || ||||||| |||||||| |
Sbjct 60370020 GCTTTCGTCTCTCAGTGTCAGTGTCAGCCCAGCAGAGTGCTTTCGCCATTGGTGTTCTTT 60370079
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||| | ||| | |||||| |||| || | | |||| ||
Sbjct 60370080 CCGATCTCTACGCATTTCACCGTTCCACCAGAAATTCCCTCTGCCCCTACCGTACTCCAG 60370139
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | | | | ||||||||||| | ||| || | |||||
Sbjct 60370140 CTTGGTAGTTTCCACTACCTGTCCAGGGTTGAGCCCTGGGATTTAACGGCGGACTTAAAA 60370199
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| |||||| |||||| | |||||||||||||||| ||| |||||
Sbjct 60370200 AGCCACCTACAGATGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTATATTA 60370259
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286
|||||| |||||| || ||||||||| ||||||||| ||
Sbjct 60370260 CCGCGGTTGCTGGTACAGAGTTAGCCGATGCTTATTCCCCA 60370300
Score = 109 bits (120), Expect = 9e-22
Identities = 185/268 (69%), Gaps = 0/268 (0%)
Strand=Plus/Minus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||| | |||||| | | ||||| || ||| || |||||||| | | || ||||
Sbjct 42033270 CTCGGTGTCAGTGTCGGCTCAGCAGAGTGCTTTCACCGTTGGTGTTCTTTCAGATCTCTA 42033211
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
|||||||||||||| ||| |||||| |||| || | | |||| || ||||
Sbjct 42033210 CGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTT 42033151
Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195
|| | | | ||||||||||| | ||| | | ||||| ||||||||
Sbjct 42033150 TCCACCACCTGTCCAGGGTTGAGCCCTGGGATTTGATGGCGGACTTAAAAAGCCGCCTAC 42033091
Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255
| | ||||| |||||| | || |||||||||||| || ||||||||||||||||
Sbjct 42033090 AGACACTTTATGCCCAATCATTCTGGATAACGCTTGTATTCTCTGTATTACCGCGGCTGC 42033031
Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||| ||| ||||| |||||||||
Sbjct 42033030 TGGCACAGAGTCAGCCGATGCTTATTCC 42033003
Score = 105 bits (116), Expect = 1e-20
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 65071642 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 65071701
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 65071702 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 65071739
Score = 100 bits (110), Expect = 5e-19
Identities = 193/285 (68%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| || || |||||| | | |||||| || |||| | |||||||| |
Sbjct 42030994 GCTTTCGTCTCTTAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGTCCTTGGTGTTCTTT 42030935
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||| |||||||||| || | | |||||| |||| || | | |||| ||
Sbjct 42030934 CTGATCTCTATGCATTTCACCACTCTTCCAGAAATTCCTTCTGCCCCTACCGTACTCCAG 42030875
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | |||||||||| | ||| || | |||||
Sbjct 42030874 TTTGGTAGTTTCCACCGCTTGTCCAGGGTTGAGCCTTGGGATTTGACGGCGGACTTAAAA 42030815
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | || ||||||||||| ||| ||||||
Sbjct 42030814 AGCCACCTACAGACGCTTTACGCCCAATCATTCTAGATAACGCTTGTATCCTCTGTATTA 42030755
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| || ||| |||||| ||||| ||| ||||||||| ||| ||
Sbjct 42030754 CCACGACTGTTGGCACAGAGTTAACCGATGCTTATTCCCCAGATA 42030710
>seq1
Length=147124936
Score = 140 bits (154), Expect = 5e-31
Identities = 202/285 (71%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| || || |||||| | | |||||| || |||||| |||||||| |
Sbjct 56954111 GCTTTCGTCTCTTAGTGTCAGTGTCGGCCCAGCAGATTGCTTTCGCCGTTGGTGTTCTTT 56954170
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || ||||| |||||||||||| ||| | |||| | |||| || | | |||| ||
Sbjct 56954171 CCGATCTCTACACATTTCACCGCTCCACCAGAAATTTCCTCTGCCCCTACCGTACTCCAG 56954230
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 56954231 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 56954290
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 56954291 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 56954350
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| ||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 56954351 CCGTAGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 56954395
Score = 78.8 bits (86), Expect = 2e-12
Identities = 69/86 (80%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 202 TTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCAC 261
|||||||||||| | || ||||||||||||| ||| |||||||| || |||||||||
Sbjct 12551623 TTTACACCCAATCATTCAGGATAACGCTTGCATCCTCTGTATTACCATGGTTGCTGGCAC 12551682
Query 262 GTAGTTAGCCGTGGCTTATTCCTCAG 287
|| ||||| ||||||||| |||
Sbjct 12551683 AGAGATAGCCTATGCTTATTCCCCAG 12551708
>seq13
Length=144148110
Score = 134 bits (148), Expect = 2e-29
Identities = 203/286 (71%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || || ||| |||||||| |
Sbjct 88406734 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTGCCGTTGGTGTTCTTT 88406793
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || | |||||||||||||||| || |||||| |||| || | | |||| ||
Sbjct 88406794 CCGATCTTTACGCATTTCACCGCTCTACCGAAAATTCCCTCTGCCCCTACCGTACTCCAG 88406853
Query 126 AAAAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
|||||| | | | | | | ||||||||||| | ||| || |||||
Sbjct 88406854 CTTGGTAGTTTCCACCGTCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGTGGACTTAAA 88406912
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | |||||| |||||| | |||||||||||||||| ||| |||||
Sbjct 88406913 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATT 88406972
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||| ||| ||||||||| ||||||||| ||| ||
Sbjct 88406973 ACCGCGGCTGCTGTCACAGAGTTAGCCGATGCTTATTCCCCAGATA 88407018
>seq12
Length=146008498
Score = 105 bits (116), Expect = 1e-20
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 4451102 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 4451043
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 4451042 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 4451005
Score = 105 bits (116), Expect = 1e-20
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 81362230 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 81362289
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 81362290 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 81362327
Score = 82.4 bits (90), Expect = 1e-13
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 201 CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCA 260
|||||| |||||| | | || ||||||||||| || ||||||| ||||||||||| |
Sbjct 87335039 CTTTACGCCCAATCATTTCGAATAACGCTTGCATTCTTTGTATTACAGCGGCTGCTGGTA 87334980
Query 261 CGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| ||||||||| |||||||||| || ||
Sbjct 87334979 CAGAGTTAGCCGATGCTTATTCCTTAGATA 87334950
>seq10
Length=114683840
Score = 105 bits (116), Expect = 1e-20
Identities = 82/98 (84%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 28068167 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 28068226
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 28068227 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 28068264
>seq35480
Length=271
Score = 102 bits (112), Expect = 1e-19
Identities = 82/98 (84%), Gaps = 1/98 (1%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 153 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCC-CGTCTTACC 211
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||||| ||||||||| ||||| ||||||
Sbjct 212 GCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 249
>seq17288
Length=421
Score = 96.9 bits (106), Expect = 6e-18
Identities = 83/102 (81%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 396 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCC--CGTCTTACC 339
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGT 289
|||||||||||||| ||||||| | ||||| ||||||| ||
Sbjct 338 ACGGCTGCTGGCACGGAGTTAGCTGGGGCTTCTTCCTCAAGT 297
>seq73508
Length=1866
Score = 95.1 bits (104), Expect = 2e-17
Identities = 83/102 (81%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| |||| | | |||| | ||| |||||| || ||| |||||
Sbjct 1842 CCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCC-CGTCTTACC 1784
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGT 289
|||||||||||||| ||||||| | ||||| ||||||| ||
Sbjct 1783 ACGGCTGCTGGCACGGAGTTAGCTGGGGCTTCTTCCTCAAGT 1742
>seq9
Length=96604005
Score = 93.3 bits (102), Expect = 7e-17
Identities = 79/96 (82%), Gaps = 1/96 (1%)
Strand=Plus/Minus
Query 190 GCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGC 249
||||||| ||||||||| ||| | | |||| | ||| |||||| || ||| |||| ||
Sbjct 14611086 GCCTACATGCCCTTTACGTCCAGTCATTCCGAAGAACACTTGCCCCCC-CGTCTTACTGC 14611028
Query 250 GGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||||||||||||| ||||||||| ||||| ||||||
Sbjct 14611027 GGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 14610992
Score = 75.2 bits (82), Expect = 2e-11
Identities = 73/94 (78%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| | |||||| |||||| | || |||||||||||| ||| |||||| |
Sbjct 53086023 CCACCTACAAACGCTTTACGCCCAATCATTCTAGATAACGCTTGCATCCTCTGTATTATC 53085964
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281
| || || |||||| ||||||||| |||||||
Sbjct 53085963 GTGGTTGGTGGCACAGAGTTAGCCGATGCTTATT 53085930
>seq7
Length=127721098
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|||||||| ||||||||| || | | | |||| | ||| |||||| || ||| |||||
Sbjct 79477242 CCGCCTACGTGCCCTTTACGCCTAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACC 79477301
Query 248 GCGGCTGCTGGCACGTAGTTAGCC 271
||||||||||||||| ||||||||
Sbjct 79477302 GCGGCTGCTGGCACGGAGTTAGCC 79477325
>seq73295
Length=200
Score = 82.4 bits (90), Expect = 1e-13
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 47 TTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGAT 106
|||||| |||||||| | | || |||||||||||||||||| ||| | ||||||
Sbjct 198 TTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTC 139
Query 107 TGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT 166
|||| || | | | || || |||||| | || | ||||||||||| |
Sbjct 138 TGCCCCTACCGTAATCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGA 79
Query 167 TTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAAC 226
|| || | ||||| || |||||| | |||||| |||||| | ||||||||||
Sbjct 78 TTGGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAAC 19
Query 227 GCTTGCCACCTACGTATT 244
|||||| ||| |||||
Sbjct 18 GCTTGCATCCTCTGTATT 1
>seq3
Length=102937913
Score = 75.2 bits (82), Expect = 2e-11
Identities = 79/103 (77%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| | |||||| || ||| | |||||||||||||| | ||| ||||||||
Sbjct 68691241 CCACCTACAGACGCTTTACGCCTAATCATTCCGGATAACGCTT-CATCCTCTGTATTACC 68691183
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| || || ||| |||||||| ||||||||| ||| ||
Sbjct 68691182 ACGGTTGTTGTCACAAAGTTAGCCAATGCTTATTCCCCAGATA 68691140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828194460849
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |