Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20arboreum_20[refseq_20GCF_5F000612285.1_202015-09-28]
75,419 sequences; 1,694,597,732 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 8e-30
seq2 127 4e-27
seq75419 123 5e-26
seq5 123 5e-26
seq4 123 5e-26
seq12 116 8e-24
seq10 116 8e-24
seq1 116 8e-24
seq6 114 3e-23
seq3 109 1e-21
seq13 107 4e-21
seq9 104 5e-20
seq17288 89.7 1e-15
seq11 89.7 1e-15
seq73508 86.0 1e-14
seq7 77.0 7e-12
>seq8
Length=127390875
Score = 136 bits (150), Expect = 8e-30
Identities = 197/279 (71%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 21004521 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 21004473
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| || |||||||||| || | |||||| ||||| ||| |||||
Sbjct 21004472 GC------TTCTTCTCTGGGAAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGC 21004420
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||| ||||
Sbjct 21004419 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCTGTAG 21004360
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| |||||||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 21004359 GAGTCTGGACCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 21004300
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || ||||| | || |||| |||||
Sbjct 21004299 CATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 21004261
Score = 113 bits (124), Expect = 1e-22
Identities = 145/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | ||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 21048930 AAAAGAAGTTCACGACTCGTGGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 21048988
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 21048989 TCGCCCATTGCAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 21049048
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | | ||| || ||
Sbjct 21049049 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATTGCTTTGGTAAGCTATT 21049108
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 21049109 GCCTCACCAACTAGCTAAT 21049127
>seq2
Length=101023042
Score = 127 bits (140), Expect = 4e-27
Identities = 195/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| |||
Sbjct 60421879 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATAC---------------CGT 60421835
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || | |||| | ||||||||| || | |||| | ||||| ||| |||||
Sbjct 60421834 CATTGCTTCTTTTCCGGGA--AAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 60421778
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| ||||||| ||| |||||| || ||||| ||||||||||||||||||
Sbjct 60421777 GGCATTGCTCCGTCAGACTTTCGCCCATTGTAGAAAATTCCCCACTGCTGCCTCCCGTAG 60421718
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 60421717 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 60421658
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || | || | || |||| |||||
Sbjct 60421657 CATCGCCTTGGTAAGCTATAGCCTCACCAACTAGCTAAT 60421619
Score = 122 bits (134), Expect = 2e-25
Identities = 147/199 (74%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 32952689 AAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 32952747
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 32952748 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 32952807
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 32952808 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 32952867
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 32952868 GCCTCACCAACTAGCTAAT 32952886
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 65071793 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 65071852
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 65071853 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 65071912
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 65071913 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 65071972
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 65071973 GCAGGCTCATCAAACAGCG 65071991
Score = 113 bits (124), Expect = 1e-22
Identities = 145/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| |||| | | ||| |||| ||
Sbjct 41709330 AAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCTACGCGGCATTGCTCCGTCAGGCTT 41709388
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 41709389 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 41709448
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||| | || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 41709449 TCCCAGTGTAGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 41709508
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 41709509 GCCTCACCAACTAGCTAAT 41709527
Score = 109 bits (120), Expect = 1e-21
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||| ||||| |||| ||| | ||||| ||| ||||| | | ||| |||| ||
Sbjct 60370326 AAAACAAGTTCACAACTCGTGGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGCCTT 60370384
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 60370385 TCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 60370444
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||| | || | ||||||| || | |||| ||| | | || ||| || ||
Sbjct 60370445 TCCCAGTGT-GCTGATCATCCTCTCGGACCAGCTATTGATCATCGCCTTGGTAAGCTATT 60370503
Query 261 ACCCCGCCTACTACCTAAT 279
| | || |||| |||||
Sbjct 60370504 GCATCACCAACTAGCTAAT 60370522
Score = 89.7 bits (98), Expect = 1e-15
Identities = 75/92 (82%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 133 TCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCG 192
|||| || ||| |||||| || ||||| |||||||||||||||||||||| ||| | |
Sbjct 42030636 TCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCTG 42030577
Query 193 TGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
||||||||| ||| ||||| || | ||||||
Sbjct 42030576 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCT 42030545
>seq75419
Length=160230
Score = 123 bits (136), Expect = 5e-26
Identities = 194/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 106051 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 106003
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 106002 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 105950
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 105949 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 105890
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 105889 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 105830
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 105829 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 105791
Score = 123 bits (136), Expect = 5e-26
Identities = 194/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 142880 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 142928
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 142929 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 142981
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 142982 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 143041
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 143042 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 143101
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 143102 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 143140
>seq5
Length=59691364
Score = 123 bits (136), Expect = 5e-26
Identities = 194/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 1154343 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 1154391
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 1154392 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 1154444
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 1154445 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 1154504
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 1154505 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 1154564
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 1154565 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 1154603
>seq4
Length=137675496
Score = 123 bits (136), Expect = 5e-26
Identities = 194/279 (70%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| || |
Sbjct 136623436 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATACCGTCAT-----------T 136623388
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 136623387 GC------TTCTTCTCCGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 136623335
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 136623334 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 136623275
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| ||
Sbjct 136623274 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 136623215
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 136623214 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 136623176
>seq12
Length=146008498
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 4450951 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 4450892
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 4450891 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 4450832
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 4450831 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 4450772
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 4450771 GCAGGCTCATCAAACAGCG 4450753
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 81362381 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 81362440
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 81362441 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 81362500
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 81362501 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 81362560
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 81362561 GCAGGCTCATCAAACAGCG 81362579
>seq10
Length=114683840
Score = 116 bits (128), Expect = 8e-24
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| ||
Sbjct 28068318 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 28068377
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
|||||||| ||||| ||||| || |||||||||||| ||| ||||| || | |||
Sbjct 28068378 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 28068437
Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284
||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| ||
Sbjct 28068438 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 28068497
Query 285 GCATCCCCATCGTACACCG 303
||| | |||| ||| ||
Sbjct 28068498 GCAGGCTCATCAAACAGCG 28068516
Score = 84.2 bits (92), Expect = 5e-14
Identities = 114/158 (72%), Gaps = 1/158 (1%)
Strand=Plus/Minus
Query 68 TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGG 127
||| ||| | | |||||||||| | | || | || ||||| | | || || | | |
Sbjct 51487181 TTTCTTCTCCAAGAAAAGAAGTTCATGACCCATGGA-CCTTCTACGTCCATGCGGCATTG 51487123
Query 128 CTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTG 187
|| |||| || ||| |||||| || ||||| |||| |||||||| ||||||| |
Sbjct 51487122 CTCTATCAGGCTTTCGCCCATTGCAAAAAATTCCCCACTACTGCCTCCTATAGGAGTCTA 51487063
Query 188 GACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTC 225
| |||||||||||| ||||||||| || | | |||||
Sbjct 51487062 GGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCTCTC 51487025
>seq1
Length=147124936
Score = 116 bits (128), Expect = 8e-24
Identities = 146/199 (73%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | ||| | ||||| ||| ||||| || | ||| | || ||
Sbjct 58265518 AAAAGAAGTTCACGACTCGTGGG-CCTTCTACCTCCACGCGACATTGCTCCGTTAGGCTT 58265576
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||||| ||| |||||||| ||
Sbjct 58265577 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTTAG 58265636
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | |||||||||| | ||| ||| | | || ||| || ||
Sbjct 58265637 TCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 58265696
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 58265697 GCCTCACCAACTAGCTAAT 58265715
Score = 104 bits (114), Expect = 5e-20
Identities = 143/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | | || | ||| |||| | | ||| |||| ||
Sbjct 56954418 AAAAGAAGTTCACGACCCGTGGGCCTTTTA-CCTCTACGCAGCATTGCTCCATCAGGCTT 56954476
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
|||| || || || ||||| |||||||||||||||||||||| ||| |||||||||||
Sbjct 56954477 TCGTGCACTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 56954536
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | || ||| || ||
Sbjct 56954537 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCACCTTGGTAAGCTATT 56954596
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 56954597 GCCTCACCAACTAGCTAAT 56954615
>seq6
Length=121339338
Score = 114 bits (126), Expect = 3e-23
Identities = 192/279 (69%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| || ||| |||
Sbjct 44955392 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATAC---------------CGT 44955348
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| |||| || || |||||||||| || | |||| | ||||| ||| ||| |
Sbjct 44955347 CATTGCTTTT--TCTCTGGGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACAC 44955291
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || || |||||| || ||||| ||||||||||||||||||
Sbjct 44955290 GGCATTGCTCCGTCAGGCTTTCACCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAG 44955231
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| || |||||||||| | ||| ||||| || | ||||||| || | ||| ||
Sbjct 44955230 GAGTCTGAGCCGTGTCTCAATCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTAAT 44955171
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 44955170 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 44955132
>seq3
Length=102937913
Score = 109 bits (120), Expect = 1e-21
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||||| ||||| ||| ||||| | | | | ||| ||
Sbjct 68691117 AAAAGAAGTTCACGACCCGTAGG-CCTTCTACCTCCACGCGGCATTGTTCCGTCAAGCTT 68691059
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||| || |||||||||||||| |||||
Sbjct 68691058 TCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCC-TAAGAGTTTGGACCGTGCCTCAG 68691000
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
||| | ||||| || | |||||||||| | ||| ||| | | || ||| || ||
Sbjct 68690999 TTCTAGTGTGGTTGATCATCCTCTCAGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 68690940
Query 261 ACCCCGCCTACTACCTAAT 279
| | || |||| |||||
Sbjct 68690939 ATATCACCAACTAGCTAAT 68690921
>seq13
Length=144148110
Score = 107 bits (118), Expect = 4e-21
Identities = 144/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| | ||||| ||| || || | | ||| ||| ||
Sbjct 88407041 AAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCAAGCGGCATTGCTCCGTCAAGCTT 88407099
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| |||||||||||||||||||| | ||| |||||||||||
Sbjct 88407100 TCGCCCATTGCGAAAAATTCCCCACTGCTGCCTCCCGTAGGAATCTGGGCCGTGTCTCAG 88407159
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| || | ||||||| || | ||| ||| | | || ||| || ||
Sbjct 88407160 TCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 88407219
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 88407220 GCCTCACCAACTAGCTAAT 88407238
Score = 91.5 bits (100), Expect = 3e-16
Identities = 119/162 (73%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128
|| ||| || | |||| ||||| || | ||| | ||||| ||| ||||| || | ||
Sbjct 109360129 TTCTTCTCTGAGAAAAAAAGTTCACGACTCGTGGG-CCTTCTACCTCCACGCAACATTGC 109360187
Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188
| ||||||| || |||||| || ||||| ||| || ||||| | |||||| ||
Sbjct 109360188 TCCGTCAGACTTTCACCCATTGCGAAAAATTCCCTACTACTACCTCCTGAAGGAGTCTGA 109360247
Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAAC 230
|||||||||||| ||||||||| || | ||||||| ||||
Sbjct 109360248 GCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTC-GAAC 109360288
Score = 89.7 bits (98), Expect = 1e-15
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 138 CTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCT 197
|| |||||||||| || ||||| |||| ||||||||| ||| ||||||| |||||||
Sbjct 123107208 CTTTCGTCCATTGTGAAAAATTCCCCACTACTGCCTCCCATAGAAGTTTGGGTCGTGTCT 123107149
Query 198 CAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCC 257
| ||||||||||| || | ||||||| || | ||| ||| | | || || |||
Sbjct 123107148 TACTTCCAATGTGGCTGATCATCCTCTCCGACCAACTACTAATCATCGCCTTTGTAAGCC 123107089
Query 258 GTTACCCCGCCTACTACCTAAT 279
|| || | || |||| |||||
Sbjct 123107088 ATTGCCTCACCAACTAGCTAAT 123107067
>seq9
Length=96604005
Score = 104 bits (114), Expect = 5e-20
Identities = 118/156 (76%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| |||| || | | ||||| ||| ||||| | | ||| |||| ||
Sbjct 53085898 AAAAGAAGTTCACAACCCATGGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 53085840
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || |||| |||||||||||||| |||||||| ||| | ||||||||
Sbjct 53085839 TCGCCCATTGCAAAAAATTC-TCACTGCTGCCTCCTGTAGGAGTCTGGGTCATGTCTCAG 53085781
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTAT 236
| ||||||||| || | ||||||| || | ||||
Sbjct 53085780 TCCCAATGTGGTTGATCATCCTCTCGGACCAGCTAT 53085745
>seq17288
Length=421
Score = 89.7 bits (98), Expect = 1e-15
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||| | || | || ||| |||||| |||| ||||| ||
Sbjct 247 CCTTCTTCACTCACGCGATATTGCTAGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 188
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
|||||||| ||||| ||||| || |||||||||||| ||| |||||
Sbjct 187 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGG 141
>seq11
Length=105699404
Score = 89.7 bits (98), Expect = 1e-15
Identities = 94/124 (76%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| |||||| || | | ||| |||| || ||| ||||| || ||||| |
Sbjct 58711406 CCTTCTACCTTCATGCGGCATTGCTCCGTCAGGCTTTCGCCCATTACGGAAAATTCCCAA 58711465
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224
||| |||||||||||||||| ||| |||||||||||| | | ||||| || | ||||||
Sbjct 58711466 CTGTTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCTAGTGTGGCTGATCATCCTCT 58711525
Query 225 CAGA 228
||||
Sbjct 58711526 CAGA 58711529
>seq73508
Length=1866
Score = 86.0 bits (94), Expect = 1e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164
||||| || |||||| | | ||| | || | || ||| |||||| |||| ||||| ||
Sbjct 1692 CCTTCTTCACTCACGCGATATTGCTAGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 1633
Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
|||||||| | ||| ||||| || |||||||||||| ||| |||||
Sbjct 1632 CTGCTGCCCCTCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGG 1586
>seq7
Length=127721098
Score = 77.0 bits (84), Expect = 7e-12
Identities = 137/199 (69%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| || | |||| || | ||| |||||||| | | ||| |||| |
Sbjct 93247624 AAAAGAAGTTCACGACCCGTGGA-CTTTCTATCTTCACGCGGCATTGCTCCGTCAGGCGT 93247682
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
||| |||||| || ||||| | |||| |||| |||||| ||||| ||||||||||
Sbjct 93247683 TCGCCCATTGCGGAAAATTCCCAAGTGCTACCTCTTGTAGGATTTTGGGTCGTGTCTCAG 93247742
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260
| ||| ||||| | | |||| || || | ||| ||| | | || ||| | ||
Sbjct 93247743 TCCCATTGTGGCTAATCATCCTTTCGGACCAGCTACTGATCATCGCCTTGGTAAACTATT 93247802
Query 261 ACCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 93247803 GCCTCACCAACTAGCTAAT 93247821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1067993921728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |