Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05]
9,148 sequences; 2,189,140,010 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq25 87.8 3e-15
seq9148 84.2 4e-14
seq9147 84.2 4e-14
seq88 84.2 4e-14
seq20 84.2 4e-14
seq14 84.2 4e-14
seq8 80.6 5e-13
seq188 78.8 2e-12
seq15 78.8 2e-12
seq164 75.2 2e-11
seq7 73.4 8e-11
>seq25
Length=50193149
Score = 87.8 bits (96), Expect = 3e-15
Identities = 103/138 (75%), Gaps = 1/138 (1%)
Strand=Plus/Minus
Query 198 GAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGAGGACC 256
|||||| | |||||| ||| ||||||||||||| || |||| | |||||||||
Sbjct 33705495 GAAACCGAGCGATCTAGCCATGAGCAGGTTGAAGAGAGCTATAACAGGCCTTGGAGGACC 33705436
Query 257 GAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCA 316
||||| | | || | ||| | | |||||||| | || ||||||||||||||||| ||
Sbjct 33705435 GAACCCACATATGTGGCAAAATATGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCA 33705376
Query 317 AACTGGGAAATAGCTCGT 334
| | ||| |||||| ||
Sbjct 33705375 AGATCGGATATAGCTAGT 33705358
>seq9148
Length=160301
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 110097 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 110156
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 110157 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 110212
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 110213 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 110268
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 110269 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 110328
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 110329 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 110388
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 110389 GCCACTCGAAC 110399
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 139000 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 138941
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 138940 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 138885
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 138884 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 138829
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 138828 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 138769
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 138768 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 138709
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 138708 GCCACTCGAAC 138698
>seq9147
Length=668584
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 382739 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 382680
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 382679 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 382624
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 382623 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 382568
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 382567 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 382508
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 382507 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 382448
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 382447 GCCACTCGAAC 382437
Score = 78.8 bits (86), Expect = 2e-12
Identities = 104/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 186745 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 186804
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 186805 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 186864
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 186865 AACCAAGATCGGATATAGCTGGT 186887
Score = 78.8 bits (86), Expect = 2e-12
Identities = 104/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 641033 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 641092
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 641093 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 641152
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 641153 AACCAAGATCGGATATAGCTGGT 641175
>seq88
Length=878102
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 425942 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 425883
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 425882 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 425827
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 425826 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 425771
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 425770 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 425711
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 425710 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 425651
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 425650 GCCACTCGAAC 425640
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 557336 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 557395
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 557396 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 557451
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 557452 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 557507
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 557508 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 557567
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 557568 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 557627
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 557628 GCCACTCGAAC 557638
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 586238 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 586179
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 586178 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 586123
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 586122 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 586067
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 586066 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 586007
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 586006 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 585947
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 585946 GCCACTCGAAC 585936
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 717583 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 717642
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 717643 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 717698
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 717699 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 717754
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 717755 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 717814
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 717815 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 717874
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 717875 GCCACTCGAAC 717885
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 746498 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 746439
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 746438 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 746383
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 746382 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 746327
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 746326 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 746267
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 746266 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 746207
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 746206 GCCACTCGAAC 746196
>seq20
Length=65574513
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 51236457 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 51236398
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 51236397 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 51236342
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 51236341 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 51236286
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 51236285 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 51236226
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 51236225 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 51236166
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 51236165 GCCACTCGAAC 51236155
>seq14
Length=44799946
Score = 84.2 bits (92), Expect = 4e-14
Identities = 209/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 35969910 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 35969851
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 35969850 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 35969795
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 35969794 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 35969739
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | |
Sbjct 35969738 TATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGT 35969679
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 35969678 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 35969619
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 35969618 GCCACTCGAAC 35969608
>seq8
Length=100353538
Score = 80.6 bits (88), Expect = 5e-13
Identities = 208/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAG---CCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || |||| || || | |
Sbjct 43088390 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAGGGCTC 43088331
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| |||||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 43088330 ---TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 43088275
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||||||| ||| | ||||| | || ||
Sbjct 43088274 GGGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCT 43088219
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
| ||| |||| | |||||||| ||| || | || ||||| ||| | | |
Sbjct 43088218 TATGGACCCGAACCTGGGTGATCTATCCATGACCTGGATGAAGCTTGGGTGAAACTAAGT 43088159
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 43088158 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 43088099
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 43088098 GCCACTCGAAC 43088088
>seq188
Length=445573
Score = 78.8 bits (86), Expect = 2e-12
Identities = 205/308 (67%), Gaps = 5/308 (2%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGG 71
|||| |||||||||| | |||| ||| || ||||| || |||| | | |
Sbjct 343475 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAAGGCTC 343416
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 343415 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 343357
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| ||||| || ||||||||| ||| | ||||| | || || |
Sbjct 343356 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 343301
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| ||| || |||| ||||| ||| | | ||||
Sbjct 343300 GGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGA 343241
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| | |||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 343240 GGTCTGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 343181
Query 312 AATCAAAC 319
| || |||
Sbjct 343180 ACTCGAAC 343173
>seq15
Length=91555666
Score = 78.8 bits (86), Expect = 2e-12
Identities = 104/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || |||| | ||||
Sbjct 20842898 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 20842839
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 20842838 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 20842779
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 20842778 AACCAAGATCGGATATAGCTGGT 20842756
Score = 75.2 bits (82), Expect = 2e-11
Identities = 207/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGA---GCCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || ||| ||| || | ||
Sbjct 87595659 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAAGAGCCCAGGGCTT 87595600
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| | |||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 87595599 ---TGACCGTGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 87595544
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||| ||| ||| | ||||| | || ||
Sbjct 87595543 GGGAACCCA--CCGG-AGCCGTAGCGAAAGTGAGTCTTCATAGGGCAATT-GTCACTGCT 87595488
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
||||| ||| | |||||||| | | || |||| ||||| ||| | | |
Sbjct 87595487 TATAGACCTGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGT 87595428
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 87595427 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 87595368
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 87595367 GCCACTCGAAC 87595357
>seq164
Length=553682
Score = 75.2 bits (82), Expect = 2e-11
Identities = 207/311 (67%), Gaps = 11/311 (4%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGA---GCCGAGTGATT 68
|||| |||||||||| | |||| ||| || ||||| || ||| ||| || | ||
Sbjct 543106 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAAGAGCCCAGGGCTT 543047
Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128
|||| | |||||| ||| | |||||||| ||| | | | | || || ||||||
Sbjct 543046 ---TGACCGTGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAA 542991
Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188
||| | ||| ||||| || ||||| ||| ||| | ||||| | || ||
Sbjct 542990 GGGAACCCA--CCGG-AGCCGTAGCGAAAGTGAGTCTTCATAGGGCAATT-GTCACTGCT 542935
Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248
||||| ||| | |||||||| | | || |||| ||||| ||| | | |
Sbjct 542934 TATAGACCTGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGGTGAAACTAAGT 542875
Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308
||||| |||||||| | |||||| | | ||||||| | | || |||||||||||
Sbjct 542874 GGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAAT 542815
Query 309 GCCAATCAAAC 319
|||| || |||
Sbjct 542814 GCCACTCGAAC 542804
>seq7
Length=42802127
Score = 73.4 bits (80), Expect = 8e-11
Identities = 204/308 (66%), Gaps = 5/308 (2%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGG 71
|||| |||||||||| | |||| ||| || ||||| || |||| | | |
Sbjct 9439407 GGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCAAGGCTC 9439466
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||||
Sbjct 9439467 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAGGG 9439525
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCT 191
| ||| ||||| || ||||||||| ||| | ||||| | || || |
Sbjct 9439526 AACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTTAT 9439581
Query 192 AGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGA 251
||| |||| | |||||||| ||| || | || ||||| ||| | | ||||
Sbjct 9439582 GGACCCGAACCTGGGTGATCTATCCATGACCTGGATGAAGCTTGGGTGAAACTAAGTGGA 9439641
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|| | |||||| | |||||| | | ||||||| | | || ||||||||||| |||
Sbjct 9439642 GGTCTGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCC 9439701
Query 312 AATCAAAC 319
| || |||
Sbjct 9439702 ACTCGAAC 9439709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972711008256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |