Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq9148 113 5e-23 seq9147 113 5e-23 seq88 113 5e-23 seq20 113 5e-23 seq15 113 5e-23 seq14 113 5e-23 seq12 113 5e-23 seq21 107 2e-21 seq16 105 7e-21 seq4 104 3e-20 seq3 102 9e-20 seq188 96.9 4e-18 seq17 95.1 1e-17 seq22 93.3 5e-17 seq9 93.3 5e-17 seq10 89.7 6e-16 seq58 87.8 2e-15 seq11 86.0 7e-15 seq152 84.2 2e-14 seq25 84.2 2e-14 seq19 84.2 2e-14 seq745 80.6 3e-13 seq851 78.8 1e-12 seq5 78.8 1e-12 seq6 77.0 4e-12 >seq9148 Length=160301 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 111673 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 111614 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 111613 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 111555 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 111554 ACAAGGAATTTCGCTACCTTAGGACCGTTA 111525 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 137424 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 137483 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 137484 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 137542 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 137543 ACAAGGAATTTCGCTACCTTAGGACCGTTA 137572 >seq9147 Length=668584 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 200850 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 200909 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 200910 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 200968 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 200969 ACAAGGAATTTCGCTACCTTAGGACCGTTA 200998 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 655138 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 655197 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 655198 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 655256 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 655257 ACAAGGAATTTCGCTACCTTAGGACCGTTA 655286 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 188512 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 188453 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 188452 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 188393 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 188392 GACAAGGAATTTCGCTACCTTAGGACAGTTA 188362 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 642800 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 642741 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 642740 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 642681 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 642680 GACAAGGAATTTCGCTACCTTAGGACAGTTA 642650 >seq88 Length=878102 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 424366 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 424425 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 424426 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 424484 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 424485 ACAAGGAATTTCGCTACCTTAGGACCGTTA 424514 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 558912 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 558853 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 558852 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 558794 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 558793 ACAAGGAATTTCGCTACCTTAGGACCGTTA 558764 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 584662 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 584721 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 584722 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 584780 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 584781 ACAAGGAATTTCGCTACCTTAGGACCGTTA 584810 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 719159 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 719100 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 719099 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 719041 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 719040 ACAAGGAATTTCGCTACCTTAGGACCGTTA 719011 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 744922 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 744981 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 744982 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 745040 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 745041 ACAAGGAATTTCGCTACCTTAGGACCGTTA 745070 >seq20 Length=65574513 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 51234881 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 51234940 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 51234941 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 51234999 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 51235000 ACAAGGAATTTCGCTACCTTAGGACCGTTA 51235029 Score = 86.0 bits (94), Expect = 7e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || ||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 35071820 CCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCCTAGGACCGTTA 35071764 Score = 84.2 bits (92), Expect = 2e-14 Identities = 107/149 (72%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85 |||||||| |||| | ||||||| || |||||||||| || | ||||||| ||| Sbjct 45354153 GGTCTTTTTGTCCAAGTGCGGGTAGTCCGCATCTTCACAGACATGTTTATTTCACCAAGC 45354212 Query 86 TCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | ||||||| ||| | ||||| | |||| |||||||||||| Sbjct 45354213 -CTCTCTCCGAGACAGTGCCCAGATCGTTACGGCTTTCGTACGGGTCAGAACTTACCCGA 45354271 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| |||||| |||| ||||||||||||| Sbjct 45354272 CAAAGAATTTTGCTAGCTTAGGACCGTTA 45354300 Score = 75.2 bits (82), Expect = 1e-11 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||| ||||| |||||||||||||| ||||||| ||||||||||||||||| Sbjct 25561148 TTTGTGCGGGTCGAAACTTACCCGACAAAGAATTTCACTACCTTAGGACCGTTA 25561095 >seq15 Length=91555666 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 20828792 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 20828733 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 20828732 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 20828674 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 20828673 ACAAGGAATTTCGCTACCTTAGGACCGTTA 20828644 Score = 107 bits (118), Expect = 2e-21 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 20841131 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 20841190 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||||| |||||||||||||||||||| ||||| | Sbjct 20841191 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 20841250 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||| |||| Sbjct 20841251 GACAAGGAATTTCGCTACCTTAGGACAGTTA 20841281 >seq14 Length=44799946 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 35968334 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 35968393 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 35968394 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 35968452 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 35968453 ACAAGGAATTTCGCTACCTTAGGACCGTTA 35968482 >seq12 Length=102570143 Score = 113 bits (124), Expect = 5e-23 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 64568336 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 64568277 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 64568276 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 64568218 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 64568217 ACAAGGAATTTCGCTACCTTAGGACCGTTA 64568188 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||| ||||| || ||||||||||||| |||||||| ||||||| Sbjct 67240685 TACGCCTTTCGTGCGGGTCGAAACTTCCCTGACAAGGAATTTCTCTACCTTATGACCGTT 67240626 Query 173 A 173 | Sbjct 67240625 A 67240625 >seq21 Length=47987235 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 40213832 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 40213891 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||| ||||||||||| Sbjct 40213892 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCCG 40213950 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 40213951 ACAAGGAATTTCGCTACCTTAGGACCGTTA 40213980 >seq16 Length=102030775 Score = 105 bits (116), Expect = 7e-21 Identities = 110/146 (75%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 81109516 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 81109575 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 81109576 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 81109634 Query 144 ACAAGGAATTTCGCTACCTTAGGACC 169 |||||||||||||||||||||||||| Sbjct 81109635 ACAAGGAATTTCGCTACCTTAGGACC 81109660 Score = 95.1 bits (104), Expect = 1e-17 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||| ||| || |||||||||| || | | ||||||| || Sbjct 60790081 GGGTCTTTCTGTCCAGGTGCGAGTAGTCCGCATCTTCACAGACATGTCTATTTCACCAAG 60790022 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| ||||| |||||||||| Sbjct 60790021 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGAAACTTACCCG 60789963 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||| ||||| Sbjct 60789962 ACAAGGAATTTCGCTACCTTAGGATCGTTA 60789933 >seq4 Length=78750349 Score = 104 bits (114), Expect = 3e-20 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 28621607 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 28621548 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| |||||| || |||| ||||| |||||||||| Sbjct 28621547 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACACCTTTTGTGCGGGTCGAAACTTACCCG 28621489 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||| ||||||||||| Sbjct 28621488 ACAAGGAATTTCGCTACCCTAGGACCGTTA 28621459 Score = 86.0 bits (94), Expect = 7e-15 Identities = 95/128 (74%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 47 GTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNN 105 ||| || |||||||||| || | | ||||||| |||| | | | ||||||| Sbjct 1694934 GTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGTGCCC 1694992 Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165 ||| | || |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1694993 AGATCGTTACGCATTTTGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAG 1695052 Query 166 GACCGTTA 173 |||||||| Sbjct 1695053 GACCGTTA 1695060 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| |||||| ||| | |||||||| |||||||||||||||||||||||||| || Sbjct 19202394 TACACCTTTCGTGTGGGTTGAAACTTACCTAACAAGGAATTTCGCTACCTTAGGACCATT 19202453 Query 173 A 173 | Sbjct 19202454 A 19202454 Score = 75.2 bits (82), Expect = 1e-11 Identities = 107/151 (71%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || ||||||||| || | | ||||||| ||| Sbjct 31655477 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCATAGACATGTCTATTTCACCGAG 31655536 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||| |||||||| | Sbjct 31655537 C-CTCTCTCCGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCAAAACTTACCTG 31655595 Query 144 ACAAGG-AATTTCGCTACCTTAGGACCGTTA 173 | |||| ||||| |||||||||||||||||| Sbjct 31655596 AAAAGGGAATTTTGCTACCTTAGGACCGTTA 31655626 >seq3 Length=37363027 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6270148 TACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 6270089 Query 173 A 173 | Sbjct 6270088 A 6270088 Score = 102 bits (112), Expect = 9e-20 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6273622 TACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 6273563 Query 173 A 173 | Sbjct 6273562 A 6273562 Score = 95.1 bits (104), Expect = 1e-17 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| |||| || || |||||||||| | | | ||||||| ||| Sbjct 6233081 GGGTCTTTCTGTCCAGGTGCGGTTAGTCCGCATCTTCACAAACATGTCTATTTCACCGAG 6233022 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||| | ||| |||||||||||| Sbjct 6233021 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTACGGGTTGGAACTTACCCG 6232963 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 6232962 ACAAGGAATTTCGCTACCTTAGGACCGTTA 6232933 >seq188 Length=445573 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 340331 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 340390 Query 173 A 173 | Sbjct 340391 A 340391 >seq17 Length=39386523 Score = 95.1 bits (104), Expect = 1e-17 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| |||| || || |||||||||| | | | ||||||| ||| Sbjct 38477899 GGGTCTTTCTGTCCAGGTGCGGTTAGTCCGCATCTTCACAAACATGTCTATTTCACCGAG 38477840 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||| | ||| |||||||||||| Sbjct 38477839 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTACGGGTTGGAACTTACCCG 38477781 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 38477780 ACAAGGAATTTCGCTACCTTAGGACCGTTA 38477751 >seq22 Length=61129363 Score = 93.3 bits (102), Expect = 5e-17 Identities = 111/152 (73%), Gaps = 7/152 (5%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||| ||| | |||||||||| || | | ||||||| ||| Sbjct 10617972 GGGTCTTTCTGTCCAGGTGCGAGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAG 10618031 Query 85 C---TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 | |||| |||||||| ||| || |||||| || ||| |||||||| Sbjct 10618032 CCTCTCAC---TGAGACAGTGCCCAGATCGTTACGCCTTTCGTGGAG-TCGAAACTTACC 10618087 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||| |||||||| Sbjct 10618088 CGACAAGGAATTTCGCTACCTTAAGACCGTTA 10618119 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| |||| |||||||||||||||| |||||||||||||||||| |||| Sbjct 36178474 TACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGAAATTTCGCTACCTTAGGATCGTT 36178533 Query 173 A 173 | Sbjct 36178534 A 36178534 >seq9 Length=117247901 Score = 93.3 bits (102), Expect = 5e-17 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85 ||||||| |||| ||||||| || |||||||||| || | | ||||||| |||| Sbjct 3574936 GGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC 3574877 Query 86 TCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | | || | || ||| || ||||||| ||||||||||||| || Sbjct 3574876 -CTCTCTCCGAAATAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACTCGG 3574818 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||| Sbjct 3574817 CAAGGAATTTCGCTACCTTAGGACCGTTA 3574789 >seq10 Length=91128445 Score = 89.7 bits (98), Expect = 6e-16 Identities = 109/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| | ||||||| || |||||||||| || | | |||| | |||| Sbjct 72103938 GGGTCTTTCTGTCCAAGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTGATTGAG 72103997 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | || ||||||| ||| || |||||| |||| ||| |||||| Sbjct 72103998 C-CTCTCTTCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGTGGGTCAAAACATACCCG 72104056 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||| ||||| |||||||||||||||||| Sbjct 72104057 ACAAGAAATTTTGCTACCTTAGGACCGTTA 72104086 >seq58 Length=1326547 Score = 87.8 bits (96), Expect = 2e-15 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170 ||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 900875 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGAACCG 900932 >seq11 Length=95484752 Score = 86.0 bits (94), Expect = 7e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || |||||||| |||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 16511306 CCTTTCGTGCAAGTCGAAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTA 16511362 Score = 77.0 bits (84), Expect = 4e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || || ||||||||| ||| ||||| |||||||||||||||||||||||||||||| Sbjct 28514608 CCTTTTGTGCAGGTCAAAACATACCCAACAAGGAATTTCGCTACCTTAGGACCGTTA 28514664 >seq152 Length=574755 Score = 84.2 bits (92), Expect = 2e-14 Identities = 97/132 (73%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 ||||||| | |||||||||| || | | ||||||| |||| | | | ||||||| Sbjct 425121 GCGGGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 425063 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| ||||| |||||||| ||||| |||||||||||| Sbjct 425062 GCCCAAATCATTACGCCTTTCGTGCGGGTCGAAACTTACCTGACAAAAAATTTCGCTACC 425003 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 425002 TTAGGACCGTTA 424991 >seq25 Length=50193149 Score = 84.2 bits (92), Expect = 2e-14 Identities = 104/144 (72%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| ||| ||||||| || |||||||||| || | | ||||||||||| Sbjct 5274073 GGGTCTTTCTATCCAGGTGCGGGTAGTCTGCATCTTCACAGACATGTCTATTTCACTGAG 5274132 Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | |||||||| ||| || ||| | | ||||| |||| ||||| Sbjct 5274133 C-CTCTCTCTGAGACAGTGCCCAGATCATTACGCCTTTCATACGGGTCGAAACTGACCCG 5274191 Query 144 ACAAGGAATTTCGCTACCTTAGGA 167 ||||||||||||||||||||| || Sbjct 5274192 ACAAGGAATTTCGCTACCTTAAGA 5274215 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct 33703823 TACACCATTTGTGCAGGTCGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGACAGTT 33703882 Query 173 A 173 | Sbjct 33703883 A 33703883 >seq19 Length=70911690 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||||||||| ||||||||||| ||||||||||||||| |||||| |||| Sbjct 48442915 TACGCCTTTCGTGCAGGTCGAAACTTACCCGAAAAGGAATTTCGCTACTTTAGGATCGTT 48442856 Query 173 A 173 | Sbjct 48442855 A 48442855 >seq745 Length=96640 Score = 80.6 bits (88), Expect = 3e-13 Identities = 96/132 (73%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| ||||||| || |||||||||| || | | ||||||| ||| Sbjct 50748 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 50689 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 50688 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 50630 Query 144 ACAAGGAATTTC 155 |||||||||||| Sbjct 50629 ACAAGGAATTTC 50618 >seq851 Length=82032 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||||||| ||| ||||| |||||||||||| ||||||||||||||||| Sbjct 8112 TACGCCTTTCGTGCAGGTTAGAATTTACCTGACAAGGAATTTTGCTACCTTAGGACCGTT 8171 Query 173 A 173 | Sbjct 8172 A 8172 >seq5 Length=56898656 Score = 78.8 bits (86), Expect = 1e-12 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||| ||||||| |||| ||||||||| |||||||||||| |||||||||||| ||| Sbjct 9205134 TACACCTTTCGTGCGAGTCGAAACTTACCCAACAAGGAATTTCACTACCTTAGGACAGTT 9205193 Query 173 A 173 | Sbjct 9205194 A 9205194 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||||| || ||| ||| |||||||||||||||||||||||| ||||| | Sbjct 35539824 TACGCCTTTCGTGCAGATCAGAATTTATCCGACAAGGAATTTCGCTACCTTAAGACCGCT 35539765 Query 173 A 173 | Sbjct 35539764 A 35539764 >seq6 Length=79162310 Score = 77.0 bits (84), Expect = 4e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 || || |||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 59643041 CCTTTTGTGCGAGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATTGTTA 59643097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547151506452