Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05]
9,148 sequences; 2,189,140,010 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq9148 113 5e-23
seq9147 113 5e-23
seq88 113 5e-23
seq20 113 5e-23
seq15 113 5e-23
seq14 113 5e-23
seq12 113 5e-23
seq21 107 2e-21
seq16 105 7e-21
seq4 104 3e-20
seq3 102 9e-20
seq188 96.9 4e-18
seq17 95.1 1e-17
seq22 93.3 5e-17
seq9 93.3 5e-17
seq10 89.7 6e-16
seq58 87.8 2e-15
seq11 86.0 7e-15
seq152 84.2 2e-14
seq25 84.2 2e-14
seq19 84.2 2e-14
seq745 80.6 3e-13
seq851 78.8 1e-12
seq5 78.8 1e-12
seq6 77.0 4e-12
>seq9148
Length=160301
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 111673 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 111614
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 111613 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 111555
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 111554 ACAAGGAATTTCGCTACCTTAGGACCGTTA 111525
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 137424 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 137483
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 137484 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 137542
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 137543 ACAAGGAATTTCGCTACCTTAGGACCGTTA 137572
>seq9147
Length=668584
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 200850 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 200909
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 200910 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 200968
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 200969 ACAAGGAATTTCGCTACCTTAGGACCGTTA 200998
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 655138 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 655197
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 655198 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 655256
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 655257 ACAAGGAATTTCGCTACCTTAGGACCGTTA 655286
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 188512 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 188453
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 188452 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 188393
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 188392 GACAAGGAATTTCGCTACCTTAGGACAGTTA 188362
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 642800 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 642741
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 642740 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 642681
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 642680 GACAAGGAATTTCGCTACCTTAGGACAGTTA 642650
>seq88
Length=878102
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 424366 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 424425
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 424426 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 424484
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 424485 ACAAGGAATTTCGCTACCTTAGGACCGTTA 424514
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 558912 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 558853
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 558852 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 558794
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 558793 ACAAGGAATTTCGCTACCTTAGGACCGTTA 558764
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 584662 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 584721
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 584722 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 584780
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 584781 ACAAGGAATTTCGCTACCTTAGGACCGTTA 584810
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 719159 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 719100
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 719099 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 719041
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 719040 ACAAGGAATTTCGCTACCTTAGGACCGTTA 719011
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 744922 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 744981
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 744982 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 745040
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 745041 ACAAGGAATTTCGCTACCTTAGGACCGTTA 745070
>seq20
Length=65574513
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 51234881 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 51234940
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 51234941 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 51234999
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 51235000 ACAAGGAATTTCGCTACCTTAGGACCGTTA 51235029
Score = 86.0 bits (94), Expect = 7e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 35071820 CCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCGCTACCCTAGGACCGTTA 35071764
Score = 84.2 bits (92), Expect = 2e-14
Identities = 107/149 (72%), Gaps = 2/149 (1%)
Strand=Plus/Plus
Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85
|||||||| |||| | ||||||| || |||||||||| || | ||||||| |||
Sbjct 45354153 GGTCTTTTTGTCCAAGTGCGGGTAGTCCGCATCTTCACAGACATGTTTATTTCACCAAGC 45354212
Query 86 TCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
| | | ||||||| ||| | ||||| | |||| ||||||||||||
Sbjct 45354213 -CTCTCTCCGAGACAGTGCCCAGATCGTTACGGCTTTCGTACGGGTCAGAACTTACCCGA 45354271
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173
||| |||||| |||| |||||||||||||
Sbjct 45354272 CAAAGAATTTTGCTAGCTTAGGACCGTTA 45354300
Score = 75.2 bits (82), Expect = 1e-11
Identities = 49/54 (91%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 120 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| |||| ||||| |||||||||||||| ||||||| |||||||||||||||||
Sbjct 25561148 TTTGTGCGGGTCGAAACTTACCCGACAAAGAATTTCACTACCTTAGGACCGTTA 25561095
>seq15
Length=91555666
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 20828792 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 20828733
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 20828732 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 20828674
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 20828673 ACAAGGAATTTCGCTACCTTAGGACCGTTA 20828644
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 20841131 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 20841190
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 20841191 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 20841250
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 20841251 GACAAGGAATTTCGCTACCTTAGGACAGTTA 20841281
>seq14
Length=44799946
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 35968334 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 35968393
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 35968394 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 35968452
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 35968453 ACAAGGAATTTCGCTACCTTAGGACCGTTA 35968482
>seq12
Length=102570143
Score = 113 bits (124), Expect = 5e-23
Identities = 114/150 (76%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 64568336 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 64568277
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 64568276 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 64568218
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 64568217 ACAAGGAATTTCGCTACCTTAGGACCGTTA 64568188
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| ||||| ||||| || ||||||||||||| |||||||| |||||||
Sbjct 67240685 TACGCCTTTCGTGCGGGTCGAAACTTCCCTGACAAGGAATTTCTCTACCTTATGACCGTT 67240626
Query 173 A 173
|
Sbjct 67240625 A 67240625
>seq21
Length=47987235
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 40213832 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 40213891
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| |||| |||||||||||
Sbjct 40213892 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCAGAACTTACCCG 40213950
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 40213951 ACAAGGAATTTCGCTACCTTAGGACCGTTA 40213980
>seq16
Length=102030775
Score = 105 bits (116), Expect = 7e-21
Identities = 110/146 (75%), Gaps = 2/146 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 81109516 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 81109575
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 81109576 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 81109634
Query 144 ACAAGGAATTTCGCTACCTTAGGACC 169
||||||||||||||||||||||||||
Sbjct 81109635 ACAAGGAATTTCGCTACCTTAGGACC 81109660
Score = 95.1 bits (104), Expect = 1e-17
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||| ||| || |||||||||| || | | ||||||| ||
Sbjct 60790081 GGGTCTTTCTGTCCAGGTGCGAGTAGTCCGCATCTTCACAGACATGTCTATTTCACCAAG 60790022
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||| ||||||||||
Sbjct 60790021 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGAAACTTACCCG 60789963
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||| |||||
Sbjct 60789962 ACAAGGAATTTCGCTACCTTAGGATCGTTA 60789933
>seq4
Length=78750349
Score = 104 bits (114), Expect = 3e-20
Identities = 112/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 28621607 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 28621548
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| |||||| || |||| ||||| ||||||||||
Sbjct 28621547 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACACCTTTTGTGCGGGTCGAAACTTACCCG 28621489
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||| |||||||||||
Sbjct 28621488 ACAAGGAATTTCGCTACCCTAGGACCGTTA 28621459
Score = 86.0 bits (94), Expect = 7e-15
Identities = 95/128 (74%), Gaps = 2/128 (2%)
Strand=Plus/Plus
Query 47 GTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNN 105
||| || |||||||||| || | | ||||||| |||| | | | |||||||
Sbjct 1694934 GTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGTGCCC 1694992
Query 106 NNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 165
||| | || |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1694993 AGATCGTTACGCATTTTGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAG 1695052
Query 166 GACCGTTA 173
||||||||
Sbjct 1695053 GACCGTTA 1695060
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
|||||| |||||| ||| | |||||||| |||||||||||||||||||||||||| ||
Sbjct 19202394 TACACCTTTCGTGTGGGTTGAAACTTACCTAACAAGGAATTTCGCTACCTTAGGACCATT 19202453
Query 173 A 173
|
Sbjct 19202454 A 19202454
Score = 75.2 bits (82), Expect = 1e-11
Identities = 107/151 (71%), Gaps = 3/151 (2%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || ||||||||| || | | ||||||| |||
Sbjct 31655477 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCATAGACATGTCTATTTCACCGAG 31655536
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| |||| |||||||| |
Sbjct 31655537 C-CTCTCTCCGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCAAAACTTACCTG 31655595
Query 144 ACAAGG-AATTTCGCTACCTTAGGACCGTTA 173
| |||| ||||| ||||||||||||||||||
Sbjct 31655596 AAAAGGGAATTTTGCTACCTTAGGACCGTTA 31655626
>seq3
Length=37363027
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6270148 TACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 6270089
Query 173 A 173
|
Sbjct 6270088 A 6270088
Score = 102 bits (112), Expect = 9e-20
Identities = 59/61 (97%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6273622 TACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 6273563
Query 173 A 173
|
Sbjct 6273562 A 6273562
Score = 95.1 bits (104), Expect = 1e-17
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| |||| || || |||||||||| | | | ||||||| |||
Sbjct 6233081 GGGTCTTTCTGTCCAGGTGCGGTTAGTCCGCATCTTCACAAACATGTCTATTTCACCGAG 6233022
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||| | ||| ||||||||||||
Sbjct 6233021 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTACGGGTTGGAACTTACCCG 6232963
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 6232962 ACAAGGAATTTCGCTACCTTAGGACCGTTA 6232933
>seq188
Length=445573
Score = 96.9 bits (106), Expect = 4e-18
Identities = 58/61 (95%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 340331 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 340390
Query 173 A 173
|
Sbjct 340391 A 340391
>seq17
Length=39386523
Score = 95.1 bits (104), Expect = 1e-17
Identities = 110/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| |||| || || |||||||||| | | | ||||||| |||
Sbjct 38477899 GGGTCTTTCTGTCCAGGTGCGGTTAGTCCGCATCTTCACAAACATGTCTATTTCACCGAG 38477840
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||| | ||| ||||||||||||
Sbjct 38477839 C-CTCTCTCCGAGACAGTGCCCAGATCATTACGCCTTTCGTACGGGTTGGAACTTACCCG 38477781
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 38477780 ACAAGGAATTTCGCTACCTTAGGACCGTTA 38477751
>seq22
Length=61129363
Score = 93.3 bits (102), Expect = 5e-17
Identities = 111/152 (73%), Gaps = 7/152 (5%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||| ||| | |||||||||| || | | ||||||| |||
Sbjct 10617972 GGGTCTTTCTGTCCAGGTGCGAGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAG 10618031
Query 85 C---TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
| |||| |||||||| ||| || |||||| || ||| ||||||||
Sbjct 10618032 CCTCTCAC---TGAGACAGTGCCCAGATCGTTACGCCTTTCGTGGAG-TCGAAACTTACC 10618087
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||| ||||||||
Sbjct 10618088 CGACAAGGAATTTCGCTACCTTAAGACCGTTA 10618119
Score = 84.2 bits (92), Expect = 2e-14
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||| |||| |||||||||||||||| |||||||||||||||||| ||||
Sbjct 36178474 TACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGAAATTTCGCTACCTTAGGATCGTT 36178533
Query 173 A 173
|
Sbjct 36178534 A 36178534
>seq9
Length=117247901
Score = 93.3 bits (102), Expect = 5e-17
Identities = 109/149 (73%), Gaps = 2/149 (1%)
Strand=Plus/Minus
Query 26 GGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGC 85
||||||| |||| ||||||| || |||||||||| || | | ||||||| ||||
Sbjct 3574936 GGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGC 3574877
Query 86 TCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
| | | || | || ||| || ||||||| ||||||||||||| ||
Sbjct 3574876 -CTCTCTCCGAAATAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACTCGG 3574818
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||
Sbjct 3574817 CAAGGAATTTCGCTACCTTAGGACCGTTA 3574789
>seq10
Length=91128445
Score = 89.7 bits (98), Expect = 6e-16
Identities = 109/150 (73%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| | ||||||| || |||||||||| || | | |||| | ||||
Sbjct 72103938 GGGTCTTTCTGTCCAAGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTGATTGAG 72103997
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | || ||||||| ||| || |||||| |||| ||| ||||||
Sbjct 72103998 C-CTCTCTTCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGTGGGTCAAAACATACCCG 72104056
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||| ||||| ||||||||||||||||||
Sbjct 72104057 ACAAGAAATTTTGCTACCTTAGGACCGTTA 72104086
>seq58
Length=1326547
Score = 87.8 bits (96), Expect = 2e-15
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170
||| || ||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 900875 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGAACCG 900932
>seq11
Length=95484752
Score = 86.0 bits (94), Expect = 7e-15
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| |||||||| |||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 16511306 CCTTTCGTGCAAGTCGAAACTTACCTGACAAGGAATTTCGCTACCTTAGGACCGTTA 16511362
Score = 77.0 bits (84), Expect = 4e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| || ||||||||| ||| ||||| ||||||||||||||||||||||||||||||
Sbjct 28514608 CCTTTTGTGCAGGTCAAAACATACCCAACAAGGAATTTCGCTACCTTAGGACCGTTA 28514664
>seq152
Length=574755
Score = 84.2 bits (92), Expect = 2e-14
Identities = 97/132 (73%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
||||||| | |||||||||| || | | ||||||| |||| | | | |||||||
Sbjct 425121 GCGGGTAGTTCGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 425063
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || ||||||| ||||| |||||||| ||||| ||||||||||||
Sbjct 425062 GCCCAAATCATTACGCCTTTCGTGCGGGTCGAAACTTACCTGACAAAAAATTTCGCTACC 425003
Query 162 TTAGGACCGTTA 173
||||||||||||
Sbjct 425002 TTAGGACCGTTA 424991
>seq25
Length=50193149
Score = 84.2 bits (92), Expect = 2e-14
Identities = 104/144 (72%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| ||| ||||||| || |||||||||| || | | |||||||||||
Sbjct 5274073 GGGTCTTTCTATCCAGGTGCGGGTAGTCTGCATCTTCACAGACATGTCTATTTCACTGAG 5274132
Query 85 CTCACGGT-TGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | |||||||| ||| || ||| | | ||||| |||| |||||
Sbjct 5274133 C-CTCTCTCTGAGACAGTGCCCAGATCATTACGCCTTTCATACGGGTCGAAACTGACCCG 5274191
Query 144 ACAAGGAATTTCGCTACCTTAGGA 167
||||||||||||||||||||| ||
Sbjct 5274192 ACAAGGAATTTCGCTACCTTAAGA 5274215
Score = 78.8 bits (86), Expect = 1e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||||||||| |||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 33703823 TACACCATTTGTGCAGGTCGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGACAGTT 33703882
Query 173 A 173
|
Sbjct 33703883 A 33703883
>seq19
Length=70911690
Score = 84.2 bits (92), Expect = 2e-14
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||
Sbjct 48442915 TACGCCTTTCGTGCAGGTCGAAACTTACCCGAAAAGGAATTTCGCTACTTTAGGATCGTT 48442856
Query 173 A 173
|
Sbjct 48442855 A 48442855
>seq745
Length=96640
Score = 80.6 bits (88), Expect = 3e-13
Identities = 96/132 (73%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| ||||||| || |||||||||| || | | ||||||| |||
Sbjct 50748 GGGTCTTTCTGTCCAGGTGCGGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 50689
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 50688 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 50630
Query 144 ACAAGGAATTTC 155
||||||||||||
Sbjct 50629 ACAAGGAATTTC 50618
>seq851
Length=82032
Score = 78.8 bits (86), Expect = 1e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||||||| ||| ||||| |||||||||||| |||||||||||||||||
Sbjct 8112 TACGCCTTTCGTGCAGGTTAGAATTTACCTGACAAGGAATTTTGCTACCTTAGGACCGTT 8171
Query 173 A 173
|
Sbjct 8172 A 8172
>seq5
Length=56898656
Score = 78.8 bits (86), Expect = 1e-12
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
|||||| ||||||| |||| ||||||||| |||||||||||| |||||||||||| |||
Sbjct 9205134 TACACCTTTCGTGCGAGTCGAAACTTACCCAACAAGGAATTTCACTACCTTAGGACAGTT 9205193
Query 173 A 173
|
Sbjct 9205194 A 9205194
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||||||| || ||| ||| |||||||||||||||||||||||| ||||| |
Sbjct 35539824 TACGCCTTTCGTGCAGATCAGAATTTATCCGACAAGGAATTTCGCTACCTTAAGACCGCT 35539765
Query 173 A 173
|
Sbjct 35539764 A 35539764
>seq6
Length=79162310
Score = 77.0 bits (84), Expect = 4e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 117 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|| || |||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 59643041 CCTTTTGTGCGAGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATTGTTA 59643097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547151506452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |