Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05]
9,148 sequences; 2,189,140,010 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq3131 77.0 5e-12
>seq3131
Length=9068
Score = 77.0 bits (84), Expect = 5e-12
Identities = 112/157 (71%), Gaps = 1/157 (1%)
Strand=Plus/Plus
Query 133 ACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTT 192
|||||| ||| || || || || |||| ||||| || |||||||| ||||| |||||
Sbjct 6668 ACTCGCG-CATCCGCTTCTTGCCCTCCTTCTGCTTGTCGAGCAGCTTCCGCTTGCGGCTG 6726
Query 193 ACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGC 252
|||| ||||| ||||||||||| |||| ||| | | ||| || | |||
Sbjct 6727 GCGTCGCCGCCATAGCATTTGGCGGTCACGTCCTTGCGCATCGCCGCGATCGTCTCGCGC 6786
Query 253 GCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289
|| || | || ||||| || || |||||||||| ||
Sbjct 6787 GCGATCACCTTGCCGCCGATCGCCGCCTGGATCGGGA 6823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 838323303168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |