Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1034 338 1e-90 seq11 259 1e-66 seq1 255 1e-65 seq5 253 4e-65 seq4 241 3e-61 seq9 233 4e-59 seq10 221 3e-55 seq7 197 3e-48 seq2 185 2e-44 seq8 132 1e-28 >seq1034 Length=160161 Score = 338 bits (374), Expect = 1e-90 Identities = 289/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 111542 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 111483 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 111482 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 111423 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 111422 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 111363 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 111362 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 111303 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 111302 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 111243 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 111242 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 111191 Score = 338 bits (374), Expect = 1e-90 Identities = 289/353 (82%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | ||||||||||| || | ||||||||||||| |||||| Sbjct 137274 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 137333 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 137334 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 137393 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182 ||||||||||||||||| || ||||||| || | ||| | | | || | || Sbjct 137394 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 137453 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |||||| Sbjct 137454 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 137513 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299 || || ||||||||||||||||||||||||| |||||| || ||||| ||| | Sbjct 137514 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 137573 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 137574 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 137625 >seq11 Length=62681010 Score = 259 bits (286), Expect = 1e-66 Identities = 273/354 (77%), Gaps = 14/354 (4%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | || | ||||||||||| || | ||||||||||||| ||||||| Sbjct 12372880 ATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTAT 12372939 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 |||||||||| | ||| |||||||||||| ||||||||||| ||||||| |||||||||| Sbjct 12372940 GCCTTTCGTGTGAGTCAGAACTTACCCGATAAGGAATTTCGTTACCTTATGACCGTTATA 12372999 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC--- 185 |||||| |||||||| || ||||||| | |||| || || || | ||| || Sbjct 12373000 GTTACGACCGCCGTTCACCGGGGCTT-CGGTCACCAACTCCCCTG-TC-ATCAGGTCATT 12373056 Query 186 ----CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 |||| |||||||||||| |||||||||| ||| |||||||| ||||| |||||| Sbjct 12373057 AACTTCCTTGACCTTCCAGCACTGGGCAGGCGTTAGCCTCTATACATGGTCTTACGACTT 12373116 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTC 298 || || ||||||||||||||||||||||| | | | || || |||| ||| | Sbjct 12373117 TGCGGAGACCTGTGTTTTTGGTAAACAGTCCCCCGAGTCTGGTCATTGCGACCCCCTTTG 12373176 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||| |||| ||||||||||| |||||| ||| |||||| | ||||||||| Sbjct 12373177 TGAGA-AGGCGCCCCTTCTCCCGAAGTTATAGGGCTATTTTGTCAAGTTCCTTA 12373229 Score = 131 bits (144), Expect = 4e-28 Identities = 179/247 (72%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT 171 ||||||||||| ||||||||||| ||| |||| | ||| || || | ||| | | Sbjct 19425316 ACCTTAGGACCATTATAGTTACGACCGTCGTTCTCCAGGGTTTCGGTCGCCAGCTCCCCT 19425257 Query 172 TGC-TC---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACA 227 | || | || | |||||||||||| ||| || || || ||||| | ||||| Sbjct 19425256 GTCATCAGGTCACCAACTTCCTTAACCTTCCGGCATTGGCCAAGCATCAGCCGCCATACA 19425197 Query 228 TCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTC 287 | ||||| ||||| | ||| |||||||||||||||||||| || | ||||||| || | Sbjct 19425196 TGGTCTTATGACTTTGTAGAGACCTGTGTTTTTGGTAAACAATCACCCGGGCCTAATCAC 19425137 Query 288 TGCG--GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345 || | || | || ||||| |||||||||| ||||||| ||| |||||| |||| Sbjct 19425136 TGTGACCCCCTTTATGAGGAGGCATCCCTTCTCCCGAAGTTACAGGGCTATTTTGTCGAG 19425077 Query 346 TTCCTTA 352 || |||| Sbjct 19425076 TTTCTTA 19425070 Score = 129 bits (142), Expect = 1e-27 Identities = 131/169 (78%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| |||||| |||| |||||| |||| | || ||| || ||||| |||||| || Sbjct 57210646 CCTTGGCCTTCCGGCACTAGGCAGGTGTCAACCCCCATATATGGTCTTACGACTTTGCGA 57210587 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG---CGGCCTGTCATAGA 303 | ||||||||||||| |||||||| ||| |||||| || ||| | ||| | || Sbjct 57210586 AGACCTGTGTTTTTGCTAAACAGTTGCTCGGGCCTGGTCACTGTGACCCCCTTTGTGAG- 57210528 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||| |||| || ||||||||||| |||||||||||||||||| Sbjct 57210527 GAGGCACCCTTTCTTCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 57210479 Score = 125 bits (138), Expect = 2e-26 Identities = 197/274 (72%), Gaps = 16/274 (6%) Strand=Plus/Minus Query 88 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACT 147 ||||||| |||||| |||||| ||||||||||| |||||||||| || | | ||| || Sbjct 42323414 ACTTACCTGACAAGAAATTTCACTACCTTAGGATCGTTATAGTTGCGACTGTTGTTCACC 42323355 Query 148 GGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC-------CTTAACCTTCCAG 200 ||||| || ||| | || || || | ||| || | ||| ||||||| | Sbjct 42323354 AAGGCTTTGGT-CACCGGCTCCCCTG-TC-ATCAGGTCACTAACTTCCTTGACCTTCCGG 42323298 Query 201 CACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTT 260 || ||| ||| || | | |||||||| ||||| |||||| |||| || ||||||||| Sbjct 42323297 TACTGGGTAGGAGTAACC--CTATACATGGTCTTACGACTTCCCAGAGACTTGTGTTTTT 42323240 Query 261 GGTAAACAGTCGCTTGGGCCTATTC--TCTG-CGGCCTGTCATAGACAGGCACCCCTTCT 317 |||||||||| || ||||| || | || | || | | || ||| |||| |||| Sbjct 42323239 GGTAAACAGTTGCCCAAGCCTAGTCATTATGACCGCTTTTGTGAG-GAGGTACCCTTTCT 42323181 Query 318 CCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 | | ||||||| ||| |||||| | |||||||| Sbjct 42323180 CTCGAAGTTACAGGGCTATTTTGTCAAGTTCCTT 42323147 >seq1 Length=55868233 Score = 255 bits (282), Expect = 1e-65 Identities = 283/376 (75%), Gaps = 21/376 (6%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | || | ||||||||||| ||| || ||||||| | | Sbjct 23420881 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 23420940 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 23420941 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 23421000 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 | |||| |||||| |||||||||||| |||| || |||| ||| | |||| Sbjct 23421001 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGCT--------TATAAC 23421052 Query 181 AGATCCCC--TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 | || || || || ||||||||||||||||| ||||| ||||||||||| || | | Sbjct 23421053 ACTTCTCCTTTTGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 23421112 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298 ||||||||| ||||||||||| ||||||||||| | ||| | | ||| || | | Sbjct 23421113 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC-TACCCCTGGTATGTGCCGCTTTCC 23421171 Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348 | ||| || |||||||||||||| | ||||||||||||||||||||||||| Sbjct 23421172 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTC 23421231 Query 349 CTTAACAATAGTTCTC 364 ||| || |||||| Sbjct 23421232 CTTCGACATGGTTCTC 23421247 Score = 168 bits (186), Expect = 1e-39 Identities = 173/222 (78%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 118 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC 176 |||||||||||||||||||||||||| || ||||||| || | ||| | | | || Sbjct 23344875 GGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATC 23344816 Query 177 ---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCT 233 | || | |||| ||||||| |||| |||||||||||||| || |||||| |||| Sbjct 23344815 AGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCT 23344756 Query 234 TGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG-- 291 | |||||| || || ||||||||||||||||||||||||| |||||| || ||||| Sbjct 23344755 TACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGAC 23344696 Query 292 -GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGG 332 ||| | || |||||||||||||||| ||||||||||| Sbjct 23344695 CCCCTTTGTGAG-GAGGCACCCCTTCTCCCGAAGTTACGGGG 23344655 >seq5 Length=64140413 Score = 253 bits (280), Expect = 4e-65 Identities = 278/364 (76%), Gaps = 12/364 (3%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | ||| | |||||||||||| | | ||| |||||| | |||||||| Sbjct 49866164 ATCTTCACAGACATTTCTATTTCACCGAGTTTTCTCCA-AGATAGTGCCTAGATCGTTAC 49866222 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||| ||||| ||| |||||||||||||| |||||| ||||||||||||||||||| Sbjct 49866223 ACCTTTTGTGCGACTCGAAACTTACCCGACAAAGAATTTTGCTACCTTAGGACCGTTATT 49866282 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC--- 185 |||||| |||||| || |||||| ||| | ||| | ||| || | ||| || Sbjct 49866283 GTTACGATTGCCGTTCACCAGGGCTTCGGTTGTCGGCTAC-CTTG-TC-ATCAGGTCACC 49866339 Query 186 ----CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 |||||||||||||| | ||||||| |||||| || |||||| ||||| |||||| Sbjct 49866340 AACTTCCTTAACCTTCCAGTATTGGGCAGGTGTCAGCCCCCATACATGGTCTTACGACTT 49866399 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG-GCCTGTCAT 300 || | ||||||||||||||||||||||| | |||||| || ||||| ||| | | Sbjct 49866400 TGCGAAGACCTGTGTTTTTGGTAAACAGTCACCCGGGCCTGGTCACTGCGACCCTTTTGT 49866459 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360 |||||||| |||| || ||||||| ||| |||||||||||||||||| ||||| Sbjct 49866460 GAGGAGGCACCCTTTCTTCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTATAGATAGT 49866519 Query 361 TCTC 364 | || Sbjct 49866520 TGTC 49866523 Score = 156 bits (172), Expect = 9e-36 Identities = 136/168 (81%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||||||||||| |||| ||||||| |||||| | |||||| ||||| ||||| ||| | Sbjct 49305237 CCTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCTCATACATGGTCTTACGACTAAGCGG 49305296 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGAC 304 | ||||| |||||| ||||||||||||| |||||| || ||||| ||| | || Sbjct 49305297 AGACCTGGGTTTTTCGTAAACAGTCGCTCGGGCCTGGTCACTGCGACCCCTTTTGTAAGG 49305356 Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 ||||||||||||||| |||||||| || |||||| ||||||||||| Sbjct 49305357 AGGCACCCCTTCTCCTGAAGTTACGCGGCTATTTTGTCGAGTTCCTTA 49305404 Score = 143 bits (158), Expect = 6e-32 Identities = 123/152 (81%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | ||| |||||||| || || | ||||| ||||||| || ||| Sbjct 15960999 GCATCTTCACAGACATTTTTATTTCACCAAGCCTCTCTCCGAGACTGTGCCCAGATTGTT 15960940 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||| || ||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 15960939 ACGACTGTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTTACTACCTTAGGACCGTTA 15960880 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGT 158 |||||||| | |||| | ||||||| ||| Sbjct 15960879 CAGTTACGGTCTTCGTTCATCGGGGCTTCAGT 15960848 Score = 141 bits (156), Expect = 2e-31 Identities = 120/148 (81%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || |||||||| || || | ||||||||||||| |||||| Sbjct 15961463 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 15961404 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||| | |||||||||||| ||||||||||| || |||||||| | ||||||||| ||| Sbjct 15961403 ACGGCCTTCGTGCGGGTCAGAACTTACCCGGTAATAAATTTCGCAAGCTTAGGACCATTA 15961344 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||||||||||| || ||||||||| Sbjct 15961343 TAGTTACGGCCGCCTTTCCCTGGGGCTT 15961316 Score = 136 bits (150), Expect = 8e-30 Identities = 119/148 (80%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || |||||||| || || | ||||||||||| | |||||| Sbjct 15961927 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCGAGACAGTGCCTAGATCGTT 15961868 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 | | |||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||| Sbjct 15961867 ATGGCTTTCGTGCGGGTCAGAACTTACCCGATAAGAAATTTCGCAAGCTTAGGACCATTA 15961808 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||||| ||||| || | ||||||| Sbjct 15961807 TAGTTACGACCGCCTTTCCCCGGGGCTT 15961780 Score = 131 bits (144), Expect = 4e-28 Identities = 118/147 (80%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| | || | || |||| ||| || | |||| |||||||||||| ||| Sbjct 15960536 CATCTTCACAGACATGTCTATCTCACTGAGCCTCTCTCCGAGATAGTGCCCAAATCATTA 15960477 Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 ||||||||||| |||| ||||||||| | || ||||| ||||||||||||||||||| Sbjct 15960476 CGCCTTTCGTGTAGGTCAGAACTTACCA-ATAAATAATTTTGCTACCTTAGGACCGTTAT 15960418 Query 128 AGTTACGGCCGCCGTTTACTGGGGCTT 154 ||||||||| || ||| || ||||||| Sbjct 15960417 AGTTACGGCAGCTGTTCACAGGGGCTT 15960391 Score = 127 bits (140), Expect = 4e-27 Identities = 173/237 (73%), Gaps = 16/237 (7%) Strand=Plus/Plus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||||||||||| || |||||| |||| |||| ||||| |||||||||||||| ||||| Sbjct 3743853 GAGACAGTGCCCAGATTGTTACGACTTTTGTGCAGGTCGAAACTTACCCGACAAAGAATT 3743912 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGC--------TTAAGT 158 |||||||||||| | || |||||||| || ||| | ||||| | | | Sbjct 3743913 TCGCTACCTTAGAATTGTCATAGTTACAACCAATGTTCA-GGGGGCTCCGATCGTCGACT 3743971 Query 159 TCACTG-CTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG 217 | ||| | || | | | | |||| |||| |||||| ||| ||||| || ||| Sbjct 3743972 CCCCTGTCATCAAGT-CACCAACA----TCCTTGACCTTCTGACACTAGGCAGACG-CAG 3744025 Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274 | || |||||| ||||| |||||| | ||| | |||||||||| | ||||| || || Sbjct 3744026 CCCCCATACATGGTCTTACGACTTTGTAGAGATCTGTGTTTTTAGAAAACAATCACT 3744082 Score = 123 bits (136), Expect = 5e-26 Identities = 138/180 (77%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 || ||||||| |||| |||| |||||| | ||||||||| ||||| | | || ||| | Sbjct 56741185 TTGACCTTCCGGCACTCGGCAAGCGTCAACCCCTATACATGGTCTTACAATTTTGCAAAG 56741244 Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG---ACA 305 |||| ||||||||||||| |||||| |||||| || ||||| || ||| | | Sbjct 56741245 ACCTATGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACC-CCCATTGTGAGGA 56741303 Query 306 GGCACCCCTTCTC-CCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||| ||||| | ||| || ||||| |||||||||||||||||| || |||| || Sbjct 56741304 GGCACCCGTTCTCTCGTAACTT-CGGGGCTATTTTGCCGAGTTCCTTAGAAAGAGTTGTC 56741362 Score = 93.3 bits (102), Expect = 9e-17 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 90 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 149 |||||||||||||||||| |||||||||||||| ||||||||||| ||||| || || || Sbjct 15962307 TTACCCGACAAGGAATTTAGCTACCTTAGGACCATTATAGTTACGACCGCCTTTCACCGG 15962248 Query 150 GGCTTAAGT 158 ||||| ||| Sbjct 15962247 GGCTTTAGT 15962239 Score = 78.8 bits (86), Expect = 2e-12 Identities = 70/88 (80%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || |||||||| || || | |||||||||||| |||||| Sbjct 15965238 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCAAGACAGTGCCCAGATCGTT 15965179 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACC 94 ||||||||||||||||| | |||||||| Sbjct 15965178 ACGCCTTTCGTGCGGGTTGAAACTTACC 15965151 >seq4 Length=62178258 Score = 241 bits (266), Expect = 3e-61 Identities = 257/333 (77%), Gaps = 11/333 (3%) Strand=Plus/Minus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 ||||||| ||| || || |||||||| ||| ||||||| |||||||||||||| | | Sbjct 11620008 ATTTCACTGAGCCTCTTTCTGAGACAGG--CCAGATCGTTATGCCTTTCGTGCGGGCCAG 11619951 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 |||||||||||| ||||||||| ||| ||||| ||| ||||||||| | |||||||| | Sbjct 11619950 AACTTACCCGACTAGGAATTTCACTATCTTAGAACCATTATAGTTATGACCGCCGTTCCC 11619891 Query 147 TGGGGCTTAAGTTCACTG---CTTCGATTGCTC--TAACAGATCCCCTTAACCTTCCAGC 201 ||||||| || ||| | || | || | | ||| || |||| ||||| | | Sbjct 11619890 CGGGGCTTTGGT-CACCGGCTCTCCTATCATTAAGTCACA-ATTTCCTTGACCTTTCGAC 11619833 Query 202 ACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTG 261 | |||||||||||||| ||||||||| ||||| |||||| ||||| ||||||||||||| Sbjct 11619832 AATGGGCAGGCGTCAGCCCCTATACATGGTCTTACGACTTTGCAGAGACCTGTGTTTTTG 11619773 Query 262 GTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGACAGGCACCCCTTCTCC 319 |||||||||||| |||| || ||||| ||| | | ||||||||||||| Sbjct 11619772 GTAAACAGTCGCCCATGCCTGGTCACTGCGACCCCTTTTGTGAGGAGGCACCCCTTCTTT 11619713 Query 320 CTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | |||||| ||||| ||||| |||||||| ||| Sbjct 11619712 CGAAGTTATGGGGTTATTTTACCGAGTTCTTTA 11619680 >seq9 Length=70713020 Score = 233 bits (258), Expect = 4e-59 Identities = 267/353 (76%), Gaps = 8/353 (2%) Strand=Plus/Minus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 |||||||||| | || | |||||||| || || | |||||| |||||| ||| || Sbjct 18946020 GCATCTTCACAGACATGTCTATTTCACCAAGCCTCTCTCCGAGACAATGCCCAGATCATT 18945961 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||||| ||||| | ||| ||||||||| | ||||||||||||||||||||| ||||| Sbjct 18945960 ACGCCTTACGTGCAGATCGAAACTTACCCAAACAGGAATTTCGCTACCTTAGGATCGTTA 18945901 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT-TCGATTGCTC---TAACAG 182 ||||||||| ||||||| || ||||||| || | ||| || | || | ||| Sbjct 18945900 TAGTTACGGTCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCTCCTGTCATCAAGTCACAA 18945841 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242 | |||| ||| || ||||| ||||| | || ||| || |||||| ||||| |||||| Sbjct 18945840 ACTTCCTTGACCATCTAGCACTGGGCAAGGGTTAGCCCCCATACATGGTCTTACGACTTT 18945781 Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT--AT-TCTCTGCGGCCTGTCA 299 | || |||||||||||||||||||||||| | |||| || | | | ||| | Sbjct 18945780 ACGGAGACCTGTGTTTTTGGTAAACAGTCGTCCGAGCCTGGATATTGCGACCCCCTTTGT 18945721 Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 || |||||||| ||||||| |||||||| || |||||||||||||||||| Sbjct 18945720 GAG-GAGGCACCCATTCTCCCAAAGTTACGAGGCTATTTTGCCGAGTTCCTTA 18945669 >seq10 Length=62175169 Score = 221 bits (244), Expect = 3e-55 Identities = 224/289 (78%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129 ||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||||| Sbjct 53681155 CCTTTCGTGCGGGTCAGAACTTACCCAACAAAGAATTTCGCTACCTTAGGACGGTTATAG 53681096 Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC---TAACAGATC 185 ||||||||||| || || ||||||| | | | ||| | | | || | || | Sbjct 53681095 TTACGGCCGCCATTCACCGGGGCTTCAATCGCCGGCTCCCCTGTCATCAGGTCACCAACT 53681036 Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245 |||| |||||||||||| ||| | | |||||| || ||| || || || |||||| || Sbjct 53681035 TCCTTGACCTTCCAGCACTGGGTAAGTGTCAGCCCCCATATATGGTTTTACGACTTTGCG 53680976 Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT--GTCATAGA 303 || || ||||||||||||||| |||||| ||||||| || ||||| ||| | || Sbjct 53680975 GAGACTTGTGTTTTTGGTAAATAGTCGCCTGGGCCTGGTCACTGCGACCTCCTTTGTAAG 53680916 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||||||| |||||||| || |||||||| | ||||||| Sbjct 53680915 GAGGCACCCCTTCTCTTAAAGTTACGAGGCTATTTTGCCAACTTCCTTA 53680867 >seq7 Length=60982465 Score = 197 bits (218), Expect = 3e-48 Identities = 248/334 (74%), Gaps = 16/334 (5%) Strand=Plus/Plus Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86 ||||||||||| || || ||||||||||| | || |||||||||||| ||| ||| | Sbjct 42174131 ATTTCACCGAGCCTCTTTCCGAGACAGTGCCTAGATTGTTACGCCTTTCATGCAGGTTAG 42174190 Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146 || ||| |||||||| ||||| |||||||||||||||||| |||| ||| ||| || || Sbjct 42174191 AATTTAGCCGACAAGAAATTTTGCTACCTTAGGACCGTTAGAGTTTTGGCTGCCATTCAC 42174250 Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT--CC-----CCTTAACCTTCCA 199 | || ||| | || | | || || || | ||| | || ||| |||||| Sbjct 42174251 TAGGACTT-TGATCGCCGGCTCCCCTG-TC-ATCAGGTTACCAACTTTCTTGACCTTCAG 42174307 Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 | | || |||||| ||| || |||||| ||||| |||||| ||||| | ||||| Sbjct 42174308 GTATTCGGTAGGCGTTAGCCCCCATACATGGTCTTACGACTTTGCAGACA----GGTTTT 42174363 Query 260 TGGTAAACAGTCGCTTGGGCCTATT--CTCTGCGGCCTGTCATAGACAGGCACCCCTTCT 317 |||||| |||||||||||||||| | | || || | || ||||||||||||| Sbjct 42174364 TGGTAAGCAGTCGCTTGGGCCTAGTAAGTGTGACCCCCTTTATGATGAGGCACCCCTTCT 42174423 Query 318 CCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351 || ||||||||||| ||||||||||||||||| Sbjct 42174424 CCTAAAGTTACGGGGCTATTTTGCCGAGTTCCTT 42174457 Score = 170 bits (188), Expect = 4e-40 Identities = 188/246 (76%), Gaps = 7/246 (3%) Strand=Plus/Minus Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67 ||||||||| || | ||||||| ||| || | ||||||||||||| ||||||| Sbjct 54566158 CATCTTCACATACATGTCTATTTCACTGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTA 54566099 Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127 ||||||| ||||||||| |||||||| |||||| ||||| ||||||||||||||||||| Sbjct 54566098 CGCCTTTTGTGCGGGTCAGAACTTACTTGACAAGAAATTTTGCTACCTTAGGACCGTTAT 54566039 Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC--TC---TAACAG 182 |||||||||||||||| || ||||||| | || | | || ||| || | || Sbjct 54566038 AGTTACGGCCGCCGTTCACCGGGGCTT-CGGTCGCCGACTCCTCTGCCATCAAGTCACCA 54565980 Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC-TTGCGACTT 241 | ||| ||||||| |||| ||| ||| |||| | || |||||| ||| || |||||| Sbjct 54565979 ACTTTCTTGACCTTCCGGCACTGGGTAGGTGTCAACCCCCATACATGGTCTTTACGACTT 54565920 Query 242 AGCAGA 247 |||| Sbjct 54565919 TACAGA 54565914 >seq2 Length=62769430 Score = 185 bits (204), Expect = 2e-44 Identities = 222/302 (74%), Gaps = 20/302 (7%) Strand=Plus/Minus Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121 || |||| || ||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 25342913 TCATTACACCATTCGTGCAGGTCGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGAC 25342854 Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181 |||| |||||| ||| ||||||||| ||| || ||| ||| | ||||| Sbjct 25342853 AGTTAGAGTTACTGCCTCCGTTTACTAGGGTTTCCATTCTAAGCT--------TATAACA 25342802 Query 182 GATCCCC--TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239 || || || || ||||||||| ||||||| || || ||| ||||||| || | || Sbjct 25342801 CTTCTCCTTTTGACTTTCCAGCACTGGGCAGGTGTTAGACTCTACACATCGTGTTACCAC 25342742 Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC- 298 |||||||| ||||||||||| |||||||||||| ||| | | ||| | | | Sbjct 25342741 TTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCTCTTTCCT 25342682 Query 299 -----ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349 | ||| || | |||||||||||| | |||||| ||||||||||||||||||| Sbjct 25342681 AATCAAAAGATAGGAGAGTACCCCTTCTCCCGAGGTTACGAGGTCATTTTGCCGAGTTCC 25342622 Query 350 TT 351 || Sbjct 25342621 TT 25342620 Score = 154 bits (170), Expect = 3e-35 Identities = 238/347 (69%), Gaps = 56/347 (16%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||||||| | || | ||||||| ||| || | | |||||||||||| ||| |||| Sbjct 40970711 ATCTTCACAGACATGTCTATTTCACTGAGCCTCTCTCTCAGACAGTGCCCAGATCATTAC 40970652 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 ||||||| |||| |||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct 40970651 GCCTTTCATGCGAGTCG-AACTTACCCGACAAGGTATTTCGCTACCTTAGGACTGTTATA 40970593 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCC 188 |||| | |||||| | ||||| |||| |||| ||| |||| |||| Sbjct 40970592 GTTATGACCGCCGCTCACTGGAGCTT-CGTTCCCTG--------GCTC--------CCCC 40970550 Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248 |||||| ||||| |||||| || || Sbjct 40970549 ----------------------------------ATACATGGTCTTACGACTTTGCTGAG 40970524 Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGACA 305 |||| |||||| ||||||||| ||| |||||| || || || ||| | || | Sbjct 40970523 ACCTATGTTTTGGGTAAACAGCCGCCCGGGCCTGGTCACTACGACAACCTTTGTGAG-GA 40970465 Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 | ||||| |||||| |||||| |||| |||||||||||||||||| Sbjct 40970464 GCCACCCATTCTCCTAAAGTTATGGGGCTATTTTGCCGAGTTCCTTA 40970418 >seq8 Length=57128820 Score = 132 bits (146), Expect = 1e-28 Identities = 156/208 (75%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 || ||||| |||||| |||| |||| ||||| ||| |||||||||||| ||||||||||| Sbjct 15476216 ATTGTTACACCTTTCATGCGAGTCGAAACTT-CCCAACAAGGAATTTCACTACCTTAGGA 15476274 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTC---- 176 ||| ||||||||||| | | || || | ||||| ||| | ||| | | | | Sbjct 15476275 CCGCTATAGTTACGGTCCCTGTCCACCGAGGCTTTGGTTGTCGGCTCCCTTGTCACCAAT 15476334 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236 | || | |||| ||||| | |||| ||||||||||||| || |||||| ||||| | Sbjct 15476335 TCACCAACTTCCTTGACCTTTCGGCACTAGGCAGGCGTCAGC-CCCATACATGGTCTTAC 15476393 Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTA 264 |||| || || || ||||||||| ||| Sbjct 15476394 AACTTTGCGGAGACTTGTGTTTTTTGTA 15476421 Score = 93.3 bits (102), Expect = 9e-17 Identities = 160/231 (69%), Gaps = 20/231 (9%) Strand=Plus/Plus Query 56 CCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 115 ||||||| ||||||||||| |||| || || ||| |||||||||||||||||||||| Sbjct 37890554 CCCAAATGGTTACGCCTTTTGTGCATATCAAAATTTATCCGACAAGGAATTTCGCTACCT 37890613 Query 116 TAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACT-GCTTCGATTGC 174 || |||| |||||||| | ||| | || || | | | | || | || | | | Sbjct 37890614 TAAGACCACTATAGTTATGACCGACATTCACCG-------ACTACCCTATCATCAAGT-C 37890665 Query 175 TCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234 | ||| |||||||||||||||| |||||| | | |||||| ||||| Sbjct 37890666 ACCAAC----TTTCTTAACCTTCCAGCAC-------GCGTCAACCCTCATACATTGTCTT 37890714 Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTC 285 ||||| || | | || | |||| | |||||||| || | ||||| || Sbjct 37890715 ACGACTCTACATAGAACTATATTTTGGATAAACAGTGGCCCGAGCCTAGTC 37890765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062389014784