Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq1034 338 1e-90
seq11 259 1e-66
seq1 255 1e-65
seq5 253 4e-65
seq4 241 3e-61
seq9 233 4e-59
seq10 221 3e-55
seq7 197 3e-48
seq2 185 2e-44
seq8 132 1e-28
>seq1034
Length=160161
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 111542 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 111483
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111482 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 111423
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 111422 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 111363
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 111362 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 111303
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 111302 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 111243
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 111242 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 111191
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 137274 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 137333
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 137334 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 137393
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 137394 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 137453
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 137454 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 137513
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 137514 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 137573
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 137574 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 137625
>seq11
Length=62681010
Score = 259 bits (286), Expect = 1e-66
Identities = 273/354 (77%), Gaps = 14/354 (4%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||||||| | || | ||||||||||| || | ||||||||||||| |||||||
Sbjct 12372880 ATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTAT 12372939
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|||||||||| | ||| |||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct 12372940 GCCTTTCGTGTGAGTCAGAACTTACCCGATAAGGAATTTCGTTACCTTATGACCGTTATA 12372999
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC--- 185
|||||| |||||||| || ||||||| | |||| || || || | ||| ||
Sbjct 12373000 GTTACGACCGCCGTTCACCGGGGCTT-CGGTCACCAACTCCCCTG-TC-ATCAGGTCATT 12373056
Query 186 ----CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241
|||| |||||||||||| |||||||||| ||| |||||||| ||||| ||||||
Sbjct 12373057 AACTTCCTTGACCTTCCAGCACTGGGCAGGCGTTAGCCTCTATACATGGTCTTACGACTT 12373116
Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTC 298
|| || ||||||||||||||||||||||| | | | || || |||| ||| |
Sbjct 12373117 TGCGGAGACCTGTGTTTTTGGTAAACAGTCCCCCGAGTCTGGTCATTGCGACCCCCTTTG 12373176
Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||| |||| ||||||||||| |||||| ||| |||||| | |||||||||
Sbjct 12373177 TGAGA-AGGCGCCCCTTCTCCCGAAGTTATAGGGCTATTTTGTCAAGTTCCTTA 12373229
Score = 131 bits (144), Expect = 4e-28
Identities = 179/247 (72%), Gaps = 6/247 (2%)
Strand=Plus/Minus
Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT 171
||||||||||| ||||||||||| ||| |||| | ||| || || | ||| | |
Sbjct 19425316 ACCTTAGGACCATTATAGTTACGACCGTCGTTCTCCAGGGTTTCGGTCGCCAGCTCCCCT 19425257
Query 172 TGC-TC---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACA 227
| || | || | |||||||||||| ||| || || || ||||| | |||||
Sbjct 19425256 GTCATCAGGTCACCAACTTCCTTAACCTTCCGGCATTGGCCAAGCATCAGCCGCCATACA 19425197
Query 228 TCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTC 287
| ||||| ||||| | ||| |||||||||||||||||||| || | ||||||| || |
Sbjct 19425196 TGGTCTTATGACTTTGTAGAGACCTGTGTTTTTGGTAAACAATCACCCGGGCCTAATCAC 19425137
Query 288 TGCG--GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAG 345
|| | || | || ||||| |||||||||| ||||||| ||| |||||| ||||
Sbjct 19425136 TGTGACCCCCTTTATGAGGAGGCATCCCTTCTCCCGAAGTTACAGGGCTATTTTGTCGAG 19425077
Query 346 TTCCTTA 352
|| ||||
Sbjct 19425076 TTTCTTA 19425070
Score = 129 bits (142), Expect = 1e-27
Identities = 131/169 (78%), Gaps = 4/169 (2%)
Strand=Plus/Minus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||| |||||| |||| |||||| |||| | || ||| || ||||| |||||| ||
Sbjct 57210646 CCTTGGCCTTCCGGCACTAGGCAGGTGTCAACCCCCATATATGGTCTTACGACTTTGCGA 57210587
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTG---CGGCCTGTCATAGA 303
| ||||||||||||| |||||||| ||| |||||| || ||| | ||| | ||
Sbjct 57210586 AGACCTGTGTTTTTGCTAAACAGTTGCTCGGGCCTGGTCACTGTGACCCCCTTTGTGAG- 57210528
Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||| |||| || ||||||||||| ||||||||||||||||||
Sbjct 57210527 GAGGCACCCTTTCTTCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 57210479
Score = 125 bits (138), Expect = 2e-26
Identities = 197/274 (72%), Gaps = 16/274 (6%)
Strand=Plus/Minus
Query 88 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACT 147
||||||| |||||| |||||| ||||||||||| |||||||||| || | | ||| ||
Sbjct 42323414 ACTTACCTGACAAGAAATTTCACTACCTTAGGATCGTTATAGTTGCGACTGTTGTTCACC 42323355
Query 148 GGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCC-------CTTAACCTTCCAG 200
||||| || ||| | || || || | ||| || | ||| ||||||| |
Sbjct 42323354 AAGGCTTTGGT-CACCGGCTCCCCTG-TC-ATCAGGTCACTAACTTCCTTGACCTTCCGG 42323298
Query 201 CACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTT 260
|| ||| ||| || | | |||||||| ||||| |||||| |||| || |||||||||
Sbjct 42323297 TACTGGGTAGGAGTAACC--CTATACATGGTCTTACGACTTCCCAGAGACTTGTGTTTTT 42323240
Query 261 GGTAAACAGTCGCTTGGGCCTATTC--TCTG-CGGCCTGTCATAGACAGGCACCCCTTCT 317
|||||||||| || ||||| || | || | || | | || ||| |||| ||||
Sbjct 42323239 GGTAAACAGTTGCCCAAGCCTAGTCATTATGACCGCTTTTGTGAG-GAGGTACCCTTTCT 42323181
Query 318 CCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351
| | ||||||| ||| |||||| | ||||||||
Sbjct 42323180 CTCGAAGTTACAGGGCTATTTTGTCAAGTTCCTT 42323147
>seq1
Length=55868233
Score = 255 bits (282), Expect = 1e-65
Identities = 283/376 (75%), Gaps = 21/376 (6%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 23420881 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 23420940
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 23420941 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 23421000
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| |||| || |||| ||| | ||||
Sbjct 23421001 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGTTTCCATTCAAAGCT--------TATAAC 23421052
Query 181 AGATCCCC--TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || || || || ||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 23421053 ACTTCTCCTTTTGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 23421112
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| ||||||||||| | ||| | | ||| || | |
Sbjct 23421113 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGC-TACCCCTGGTATGTGCCGCTTTCC 23421171
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| | |||||||||||||||||||||||||
Sbjct 23421172 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAGGTTACGGGGTCATTTTGCCGAGTTC 23421231
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 23421232 CTTCGACATGGTTCTC 23421247
Score = 168 bits (186), Expect = 1e-39
Identities = 173/222 (78%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 118 GGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC 176
|||||||||||||||||||||||||| || ||||||| || | ||| | | | ||
Sbjct 23344875 GGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATC 23344816
Query 177 ---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCT 233
| || | |||| ||||||| |||| |||||||||||||| || |||||| ||||
Sbjct 23344815 AGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCT 23344756
Query 234 TGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG-- 291
| |||||| || || ||||||||||||||||||||||||| |||||| || |||||
Sbjct 23344755 TACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGAC 23344696
Query 292 -GCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGG 332
||| | || |||||||||||||||| |||||||||||
Sbjct 23344695 CCCCTTTGTGAG-GAGGCACCCCTTCTCCCGAAGTTACGGGG 23344655
>seq5
Length=64140413
Score = 253 bits (280), Expect = 4e-65
Identities = 278/364 (76%), Gaps = 12/364 (3%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||||||| | ||| | |||||||||||| | | ||| |||||| | ||||||||
Sbjct 49866164 ATCTTCACAGACATTTCTATTTCACCGAGTTTTCTCCA-AGATAGTGCCTAGATCGTTAC 49866222
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
||||| ||||| ||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct 49866223 ACCTTTTGTGCGACTCGAAACTTACCCGACAAAGAATTTTGCTACCTTAGGACCGTTATT 49866282
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATC--- 185
|||||| |||||| || |||||| ||| | ||| | ||| || | ||| ||
Sbjct 49866283 GTTACGATTGCCGTTCACCAGGGCTTCGGTTGTCGGCTAC-CTTG-TC-ATCAGGTCACC 49866339
Query 186 ----CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241
|||||||||||||| | ||||||| |||||| || |||||| ||||| ||||||
Sbjct 49866340 AACTTCCTTAACCTTCCAGTATTGGGCAGGTGTCAGCCCCCATACATGGTCTTACGACTT 49866399
Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG-GCCTGTCAT 300
|| | ||||||||||||||||||||||| | |||||| || ||||| ||| | |
Sbjct 49866400 TGCGAAGACCTGTGTTTTTGGTAAACAGTCACCCGGGCCTGGTCACTGCGACCCTTTTGT 49866459
Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360
|||||||| |||| || ||||||| ||| |||||||||||||||||| |||||
Sbjct 49866460 GAGGAGGCACCCTTTCTTCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTATAGATAGT 49866519
Query 361 TCTC 364
| ||
Sbjct 49866520 TGTC 49866523
Score = 156 bits (172), Expect = 9e-36
Identities = 136/168 (81%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||||||||||| |||| ||||||| |||||| | |||||| ||||| ||||| ||| |
Sbjct 49305237 CCTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCTCATACATGGTCTTACGACTAAGCGG 49305296
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGAC 304
| ||||| |||||| ||||||||||||| |||||| || ||||| ||| | ||
Sbjct 49305297 AGACCTGGGTTTTTCGTAAACAGTCGCTCGGGCCTGGTCACTGCGACCCCTTTTGTAAGG 49305356
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
||||||||||||||| |||||||| || |||||| |||||||||||
Sbjct 49305357 AGGCACCCCTTCTCCTGAAGTTACGCGGCTATTTTGTCGAGTTCCTTA 49305404
Score = 143 bits (158), Expect = 6e-32
Identities = 123/152 (81%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | ||| |||||||| || || | ||||| ||||||| || |||
Sbjct 15960999 GCATCTTCACAGACATTTTTATTTCACCAAGCCTCTCTCCGAGACTGTGCCCAGATTGTT 15960940
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||| || ||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 15960939 ACGACTGTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTTACTACCTTAGGACCGTTA 15960880
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGT 158
|||||||| | |||| | ||||||| |||
Sbjct 15960879 CAGTTACGGTCTTCGTTCATCGGGGCTTCAGT 15960848
Score = 141 bits (156), Expect = 2e-31
Identities = 120/148 (81%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || |||||||| || || | ||||||||||||| ||||||
Sbjct 15961463 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 15961404
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||| | |||||||||||| ||||||||||| || |||||||| | ||||||||| |||
Sbjct 15961403 ACGGCCTTCGTGCGGGTCAGAACTTACCCGGTAATAAATTTCGCAAGCTTAGGACCATTA 15961344
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||||||||||| || |||||||||
Sbjct 15961343 TAGTTACGGCCGCCTTTCCCTGGGGCTT 15961316
Score = 136 bits (150), Expect = 8e-30
Identities = 119/148 (80%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || |||||||| || || | ||||||||||| | ||||||
Sbjct 15961927 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCGAGACAGTGCCTAGATCGTT 15961868
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
| | |||||||||||||| |||||||||||| ||| |||||||| | ||||||||| |||
Sbjct 15961867 ATGGCTTTCGTGCGGGTCAGAACTTACCCGATAAGAAATTTCGCAAGCTTAGGACCATTA 15961808
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||||| ||||| || | |||||||
Sbjct 15961807 TAGTTACGACCGCCTTTCCCCGGGGCTT 15961780
Score = 131 bits (144), Expect = 4e-28
Identities = 118/147 (80%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67
||||||||| | || | || |||| ||| || | |||| |||||||||||| |||
Sbjct 15960536 CATCTTCACAGACATGTCTATCTCACTGAGCCTCTCTCCGAGATAGTGCCCAAATCATTA 15960477
Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127
||||||||||| |||| ||||||||| | || ||||| |||||||||||||||||||
Sbjct 15960476 CGCCTTTCGTGTAGGTCAGAACTTACCA-ATAAATAATTTTGCTACCTTAGGACCGTTAT 15960418
Query 128 AGTTACGGCCGCCGTTTACTGGGGCTT 154
||||||||| || ||| || |||||||
Sbjct 15960417 AGTTACGGCAGCTGTTCACAGGGGCTT 15960391
Score = 127 bits (140), Expect = 4e-27
Identities = 173/237 (73%), Gaps = 16/237 (7%)
Strand=Plus/Plus
Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106
||||||||||||| || |||||| |||| |||| ||||| |||||||||||||| |||||
Sbjct 3743853 GAGACAGTGCCCAGATTGTTACGACTTTTGTGCAGGTCGAAACTTACCCGACAAAGAATT 3743912
Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGC--------TTAAGT 158
|||||||||||| | || |||||||| || ||| | ||||| | | |
Sbjct 3743913 TCGCTACCTTAGAATTGTCATAGTTACAACCAATGTTCA-GGGGGCTCCGATCGTCGACT 3743971
Query 159 TCACTG-CTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAG 217
| ||| | || | | | | |||| |||| |||||| ||| ||||| || |||
Sbjct 3743972 CCCCTGTCATCAAGT-CACCAACA----TCCTTGACCTTCTGACACTAGGCAGACG-CAG 3744025
Query 218 CTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCT 274
| || |||||| ||||| |||||| | ||| | |||||||||| | ||||| || ||
Sbjct 3744026 CCCCCATACATGGTCTTACGACTTTGTAGAGATCTGTGTTTTTAGAAAACAATCACT 3744082
Score = 123 bits (136), Expect = 5e-26
Identities = 138/180 (77%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248
|| ||||||| |||| |||| |||||| | ||||||||| ||||| | | || ||| |
Sbjct 56741185 TTGACCTTCCGGCACTCGGCAAGCGTCAACCCCTATACATGGTCTTACAATTTTGCAAAG 56741244
Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG---ACA 305
|||| ||||||||||||| |||||| |||||| || ||||| || ||| | |
Sbjct 56741245 ACCTATGTTTTTGGTAAATAGTCGCCCGGGCCTGGTCACTGCGACC-CCCATTGTGAGGA 56741303
Query 306 GGCACCCCTTCTC-CCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCTC 364
||||||| ||||| | ||| || ||||| |||||||||||||||||| || |||| ||
Sbjct 56741304 GGCACCCGTTCTCTCGTAACTT-CGGGGCTATTTTGCCGAGTTCCTTAGAAAGAGTTGTC 56741362
Score = 93.3 bits (102), Expect = 9e-17
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 90 TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGG 149
|||||||||||||||||| |||||||||||||| ||||||||||| ||||| || || ||
Sbjct 15962307 TTACCCGACAAGGAATTTAGCTACCTTAGGACCATTATAGTTACGACCGCCTTTCACCGG 15962248
Query 150 GGCTTAAGT 158
||||| |||
Sbjct 15962247 GGCTTTAGT 15962239
Score = 78.8 bits (86), Expect = 2e-12
Identities = 70/88 (80%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || |||||||| || || | |||||||||||| ||||||
Sbjct 15965238 GCATCTTCACAGACATGTTTATTTCACCAAGCCTCTCTCCAAGACAGTGCCCAGATCGTT 15965179
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACC 94
||||||||||||||||| | ||||||||
Sbjct 15965178 ACGCCTTTCGTGCGGGTTGAAACTTACC 15965151
>seq4
Length=62178258
Score = 241 bits (266), Expect = 3e-61
Identities = 257/333 (77%), Gaps = 11/333 (3%)
Strand=Plus/Minus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
||||||| ||| || || |||||||| ||| ||||||| |||||||||||||| | |
Sbjct 11620008 ATTTCACTGAGCCTCTTTCTGAGACAGG--CCAGATCGTTATGCCTTTCGTGCGGGCCAG 11619951
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|||||||||||| ||||||||| ||| ||||| ||| ||||||||| | |||||||| |
Sbjct 11619950 AACTTACCCGACTAGGAATTTCACTATCTTAGAACCATTATAGTTATGACCGCCGTTCCC 11619891
Query 147 TGGGGCTTAAGTTCACTG---CTTCGATTGCTC--TAACAGATCCCCTTAACCTTCCAGC 201
||||||| || ||| | || | || | | ||| || |||| ||||| | |
Sbjct 11619890 CGGGGCTTTGGT-CACCGGCTCTCCTATCATTAAGTCACA-ATTTCCTTGACCTTTCGAC 11619833
Query 202 ACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTG 261
| |||||||||||||| ||||||||| ||||| |||||| ||||| |||||||||||||
Sbjct 11619832 AATGGGCAGGCGTCAGCCCCTATACATGGTCTTACGACTTTGCAGAGACCTGTGTTTTTG 11619773
Query 262 GTAAACAGTCGCTTGGGCCTATTCTCTGCG--GCCTGTCATAGACAGGCACCCCTTCTCC 319
|||||||||||| |||| || ||||| ||| | | |||||||||||||
Sbjct 11619772 GTAAACAGTCGCCCATGCCTGGTCACTGCGACCCCTTTTGTGAGGAGGCACCCCTTCTTT 11619713
Query 320 CTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
| |||||| ||||| ||||| |||||||| |||
Sbjct 11619712 CGAAGTTATGGGGTTATTTTACCGAGTTCTTTA 11619680
>seq9
Length=70713020
Score = 233 bits (258), Expect = 4e-59
Identities = 267/353 (76%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | |||||||| || || | |||||| |||||| ||| ||
Sbjct 18946020 GCATCTTCACAGACATGTCTATTTCACCAAGCCTCTCTCCGAGACAATGCCCAGATCATT 18945961
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||| ||||| | ||| ||||||||| | ||||||||||||||||||||| |||||
Sbjct 18945960 ACGCCTTACGTGCAGATCGAAACTTACCCAAACAGGAATTTCGCTACCTTAGGATCGTTA 18945901
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT-TCGATTGCTC---TAACAG 182
||||||||| ||||||| || ||||||| || | ||| || | || | |||
Sbjct 18945900 TAGTTACGGTCGCCGTTCACCGGGGCTTCGGTCGTCGGCTCTCCTGTCATCAAGTCACAA 18945841
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||| || ||||| ||||| | || ||| || |||||| ||||| ||||||
Sbjct 18945840 ACTTCCTTGACCATCTAGCACTGGGCAAGGGTTAGCCCCCATACATGGTCTTACGACTTT 18945781
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT--AT-TCTCTGCGGCCTGTCA 299
| || |||||||||||||||||||||||| | |||| || | | | ||| |
Sbjct 18945780 ACGGAGACCTGTGTTTTTGGTAAACAGTCGTCCGAGCCTGGATATTGCGACCCCCTTTGT 18945721
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||| ||||||| |||||||| || ||||||||||||||||||
Sbjct 18945720 GAG-GAGGCACCCATTCTCCCAAAGTTACGAGGCTATTTTGCCGAGTTCCTTA 18945669
>seq10
Length=62175169
Score = 221 bits (244), Expect = 3e-55
Identities = 224/289 (78%), Gaps = 6/289 (2%)
Strand=Plus/Minus
Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129
||||||||||||||| |||||||||| |||| |||||||||||||||||||| |||||||
Sbjct 53681155 CCTTTCGTGCGGGTCAGAACTTACCCAACAAAGAATTTCGCTACCTTAGGACGGTTATAG 53681096
Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC-TC---TAACAGATC 185
||||||||||| || || ||||||| | | | ||| | | | || | || |
Sbjct 53681095 TTACGGCCGCCATTCACCGGGGCTTCAATCGCCGGCTCCCCTGTCATCAGGTCACCAACT 53681036
Query 186 CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCA 245
|||| |||||||||||| ||| | | |||||| || ||| || || || |||||| ||
Sbjct 53681035 TCCTTGACCTTCCAGCACTGGGTAAGTGTCAGCCCCCATATATGGTTTTACGACTTTGCG 53680976
Query 246 GAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT--GTCATAGA 303
|| || ||||||||||||||| |||||| ||||||| || ||||| ||| | ||
Sbjct 53680975 GAGACTTGTGTTTTTGGTAAATAGTCGCCTGGGCCTGGTCACTGCGACCTCCTTTGTAAG 53680916
Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||||||||| |||||||| || |||||||| | |||||||
Sbjct 53680915 GAGGCACCCCTTCTCTTAAAGTTACGAGGCTATTTTGCCAACTTCCTTA 53680867
>seq7
Length=60982465
Score = 197 bits (218), Expect = 3e-48
Identities = 248/334 (74%), Gaps = 16/334 (5%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
||||||||||| || || ||||||||||| | || |||||||||||| ||| ||| |
Sbjct 42174131 ATTTCACCGAGCCTCTTTCCGAGACAGTGCCTAGATTGTTACGCCTTTCATGCAGGTTAG 42174190
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
|| ||| |||||||| ||||| |||||||||||||||||| |||| ||| ||| || ||
Sbjct 42174191 AATTTAGCCGACAAGAAATTTTGCTACCTTAGGACCGTTAGAGTTTTGGCTGCCATTCAC 42174250
Query 147 TGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGAT--CC-----CCTTAACCTTCCA 199
| || ||| | || | | || || || | ||| | || ||| ||||||
Sbjct 42174251 TAGGACTT-TGATCGCCGGCTCCCCTG-TC-ATCAGGTTACCAACTTTCTTGACCTTCAG 42174307
Query 200 GCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259
| | || |||||| ||| || |||||| ||||| |||||| ||||| | |||||
Sbjct 42174308 GTATTCGGTAGGCGTTAGCCCCCATACATGGTCTTACGACTTTGCAGACA----GGTTTT 42174363
Query 260 TGGTAAACAGTCGCTTGGGCCTATT--CTCTGCGGCCTGTCATAGACAGGCACCCCTTCT 317
|||||| |||||||||||||||| | | || || | || |||||||||||||
Sbjct 42174364 TGGTAAGCAGTCGCTTGGGCCTAGTAAGTGTGACCCCCTTTATGATGAGGCACCCCTTCT 42174423
Query 318 CCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTT 351
|| ||||||||||| |||||||||||||||||
Sbjct 42174424 CCTAAAGTTACGGGGCTATTTTGCCGAGTTCCTT 42174457
Score = 170 bits (188), Expect = 4e-40
Identities = 188/246 (76%), Gaps = 7/246 (3%)
Strand=Plus/Minus
Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67
||||||||| || | ||||||| ||| || | ||||||||||||| |||||||
Sbjct 54566158 CATCTTCACATACATGTCTATTTCACTGAGCCTCTCTCCGAGACAGTGCCCAGATCGTTA 54566099
Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127
||||||| ||||||||| |||||||| |||||| ||||| |||||||||||||||||||
Sbjct 54566098 CGCCTTTTGTGCGGGTCAGAACTTACTTGACAAGAAATTTTGCTACCTTAGGACCGTTAT 54566039
Query 128 AGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGC--TC---TAACAG 182
|||||||||||||||| || ||||||| | || | | || ||| || | ||
Sbjct 54566038 AGTTACGGCCGCCGTTCACCGGGGCTT-CGGTCGCCGACTCCTCTGCCATCAAGTCACCA 54565980
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC-TTGCGACTT 241
| ||| ||||||| |||| ||| ||| |||| | || |||||| ||| || ||||||
Sbjct 54565979 ACTTTCTTGACCTTCCGGCACTGGGTAGGTGTCAACCCCCATACATGGTCTTTACGACTT 54565920
Query 242 AGCAGA 247
||||
Sbjct 54565919 TACAGA 54565914
>seq2
Length=62769430
Score = 185 bits (204), Expect = 2e-44
Identities = 222/302 (74%), Gaps = 20/302 (7%)
Strand=Plus/Minus
Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121
|| |||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 25342913 TCATTACACCATTCGTGCAGGTCGCTACTTATGTGACAAGGAATTTCGCTACCTTAGGAC 25342854
Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181
|||| |||||| ||| ||||||||| ||| || ||| ||| | |||||
Sbjct 25342853 AGTTAGAGTTACTGCCTCCGTTTACTAGGGTTTCCATTCTAAGCT--------TATAACA 25342802
Query 182 GATCCCC--TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGAC 239
|| || || || ||||||||| ||||||| || || ||| ||||||| || | ||
Sbjct 25342801 CTTCTCCTTTTGACTTTCCAGCACTGGGCAGGTGTTAGACTCTACACATCGTGTTACCAC 25342742
Query 240 TTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC- 298
|||||||| ||||||||||| |||||||||||| ||| | | ||| | | |
Sbjct 25342741 TTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCTCTTTCCT 25342682
Query 299 -----ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349
| ||| || | |||||||||||| | |||||| |||||||||||||||||||
Sbjct 25342681 AATCAAAAGATAGGAGAGTACCCCTTCTCCCGAGGTTACGAGGTCATTTTGCCGAGTTCC 25342622
Query 350 TT 351
||
Sbjct 25342621 TT 25342620
Score = 154 bits (170), Expect = 3e-35
Identities = 238/347 (69%), Gaps = 56/347 (16%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||||||| | || | ||||||| ||| || | | |||||||||||| ||| ||||
Sbjct 40970711 ATCTTCACAGACATGTCTATTTCACTGAGCCTCTCTCTCAGACAGTGCCCAGATCATTAC 40970652
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
||||||| |||| |||| |||||||||||||||| |||||||||||||||||| ||||||
Sbjct 40970651 GCCTTTCATGCGAGTCG-AACTTACCCGACAAGGTATTTCGCTACCTTAGGACTGTTATA 40970593
Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCC 188
|||| | |||||| | ||||| |||| |||| ||| |||| ||||
Sbjct 40970592 GTTATGACCGCCGCTCACTGGAGCTT-CGTTCCCTG--------GCTC--------CCCC 40970550
Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAA 248
|||||| ||||| |||||| || ||
Sbjct 40970549 ----------------------------------ATACATGGTCTTACGACTTTGCTGAG 40970524
Query 249 ACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCATAGACA 305
|||| |||||| ||||||||| ||| |||||| || || || ||| | || |
Sbjct 40970523 ACCTATGTTTTGGGTAAACAGCCGCCCGGGCCTGGTCACTACGACAACCTTTGTGAG-GA 40970465
Query 306 GGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
| ||||| |||||| |||||| |||| ||||||||||||||||||
Sbjct 40970464 GCCACCCATTCTCCTAAAGTTATGGGGCTATTTTGCCGAGTTCCTTA 40970418
>seq8
Length=57128820
Score = 132 bits (146), Expect = 1e-28
Identities = 156/208 (75%), Gaps = 6/208 (3%)
Strand=Plus/Plus
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|| ||||| |||||| |||| |||| ||||| ||| |||||||||||| |||||||||||
Sbjct 15476216 ATTGTTACACCTTTCATGCGAGTCGAAACTT-CCCAACAAGGAATTTCACTACCTTAGGA 15476274
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTC---- 176
||| ||||||||||| | | || || | ||||| ||| | ||| | | | |
Sbjct 15476275 CCGCTATAGTTACGGTCCCTGTCCACCGAGGCTTTGGTTGTCGGCTCCCTTGTCACCAAT 15476334
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236
| || | |||| ||||| | |||| ||||||||||||| || |||||| ||||| |
Sbjct 15476335 TCACCAACTTCCTTGACCTTTCGGCACTAGGCAGGCGTCAGC-CCCATACATGGTCTTAC 15476393
Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTA 264
|||| || || || ||||||||| |||
Sbjct 15476394 AACTTTGCGGAGACTTGTGTTTTTTGTA 15476421
Score = 93.3 bits (102), Expect = 9e-17
Identities = 160/231 (69%), Gaps = 20/231 (9%)
Strand=Plus/Plus
Query 56 CCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCT 115
||||||| ||||||||||| |||| || || ||| ||||||||||||||||||||||
Sbjct 37890554 CCCAAATGGTTACGCCTTTTGTGCATATCAAAATTTATCCGACAAGGAATTTCGCTACCT 37890613
Query 116 TAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACT-GCTTCGATTGC 174
|| |||| |||||||| | ||| | || || | | | | || | || | | |
Sbjct 37890614 TAAGACCACTATAGTTATGACCGACATTCACCG-------ACTACCCTATCATCAAGT-C 37890665
Query 175 TCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT 234
| ||| |||||||||||||||| |||||| | | |||||| |||||
Sbjct 37890666 ACCAAC----TTTCTTAACCTTCCAGCAC-------GCGTCAACCCTCATACATTGTCTT 37890714
Query 235 GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTC 285
||||| || | | || | |||| | |||||||| || | ||||| ||
Sbjct 37890715 ACGACTCTACATAGAACTATATTTTGGATAAACAGTGGCCCGAGCCTAGTC 37890765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062389014784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |