Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1034 183 6e-44 seq1 178 3e-42 seq2 145 1e-32 seq9 140 6e-31 seq4 131 3e-28 seq10 127 4e-27 seq7 120 6e-25 seq5 120 6e-25 seq12 98.7 2e-18 seq11 93.3 8e-17 seq6 89.7 1e-15 >seq1034 Length=160161 Score = 183 bits (202), Expect = 6e-44 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 111731 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 111790 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 111791 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 111849 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 111850 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 111909 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 111910 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 111959 Score = 183 bits (202), Expect = 6e-44 Identities = 180/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 137085 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 137026 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 137025 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 136967 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 136966 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 136907 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 136906 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 136857 >seq1 Length=55868233 Score = 178 bits (196), Expect = 3e-42 Identities = 179/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 23408681 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 23408740 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 | ||||| | |||| | ||| ||| | || | | |||||||||||| ||||| Sbjct 23408741 GTGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGCAAAGGCAGAAGGGA 23408799 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 23408800 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 23408859 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| || || |||||| Sbjct 23408860 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTGACTCTAGGGATA 23408909 Score = 107 bits (118), Expect = 4e-21 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 110 CGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGG 169 ||||||| || || ||| ||||| ||||||||| |||||| ||||||||||||||| Sbjct 23420711 CGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTAACGGAGG 23420652 Query 170 CGCCCAAAGATACCCTCA-GCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGG 228 | | ||| || |||| ||| ||| | || || | || || | ||| Sbjct 23420651 TGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGC-----GTAATGGTATAAGCC 23420597 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 || |||||| || ||| | ||| | ||| |||||||||||| | || |||||||| Sbjct 23420596 TGCCTGACTGTGAGACCGACTGGTCGAACAGAGACGAAAGTCGGCCATAGTGATCCGGGA 23420537 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || | | ||||| ||| |||||| |||||| |||| ||| | ||||||| Sbjct 23420536 GTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATA 23420486 Score = 93.3 bits (102), Expect = 8e-17 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | ||||| | |||| | || || ||||| |||||| Sbjct 36045729 AGTGCAAAGGCAGAAGGGAGCTTGACAAGAAGACCCACCCGTTGAGTAGGGATGAAAGTT 36045670 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 || |||| ||||||| |||||| || ||||| ||| ||||||| | |||||| ||| Sbjct 36045669 GGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCTGTCGCTCAATAATTAAAAGTTACT 36045610 Query 331 CTGGGGATA 339 || |||||| Sbjct 36045609 CTAGGGATA 36045601 Score = 89.7 bits (98), Expect = 1e-15 Identities = 98/129 (76%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||| | | | |||| | |||||| | |||||||| || Sbjct 4627670 AGTGCAAAGGCAGAAGGGAGCTTGA-TTCAAGACCCACCTGTCTAGTAAGGACGAAAATC 4627612 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | ||| ||||||| |||| || || || || |||||||| |||||||||| || Sbjct 4627611 AGCTTTAGTGATCCGATTGTGCCGAGTGAAAGGGTCGTCGCTCAACGGATAAAAATTATT 4627552 Query 331 CTGGGGATA 339 || |||||| Sbjct 4627551 CTAGGGATA 4627543 >seq2 Length=62769430 Score = 145 bits (160), Expect = 1e-32 Identities = 174/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||| ||| |||| | || ||| ||||||| |||| ||||| ||||| |||| Sbjct 1547332 GGGATAGTCTCAGGTAGACAATTTCCATGGGGCGTAGGCCTTCCAAAAGGTAACAAAGGC 1547273 Query 171 GCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGG 228 | ||||| | |||| ||| ||| ||| | || | | |||| ||||||||||||| Sbjct 1547272 GTGCAAAGGTTTCCTCGAGCC-GGACGGAGATTG-GCCCTCGAGTGTAAAGGCAAAAGGG 1547215 Query 229 TGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| || Sbjct 1547214 AGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACG 1547155 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| || ||||| || ||||||||| |||||||| ||| || |||||| Sbjct 1547154 GTGCCGAGTGGAAGGGTTGTCGCTCGATAGATAAAAGTTACTCTAGGGATA 1547104 Score = 114 bits (126), Expect = 3e-23 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAAC---CAT 204 |||||||||| ||||| || ||| ||||| | ||||| ||| ||| | | | Sbjct 25239294 GCCTCCCAAAAGGTAACAGAAGCGTGCAAAGGTTTCCTCATGCCGGACGGAGATTGGCCT 25239353 Query 205 GCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACG 264 || |||||||||| | ||||| |||||||| | | |||| | ||| | ||||||| Sbjct 25239354 TCG---AGTGCAAAGGAAGAAGGGAGTTTGACTACAAGACCCACCCGTCAAACAGGGACA 25239410 Query 265 AAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAA 324 ||||||| ||| ||||||| | ||| || ||||| || |||||||| |||||||||| Sbjct 25239411 AAAGTCGACTTTAGTGATCCGACAATGCCGAGTGGAAGGGTCGTCGCTCAACGGATAAAA 25239470 Query 325 GCTACCCTGGGGATA 339 | | | || |||||| Sbjct 25239471 GTTGCTCTAGGGATA 25239485 Score = 105 bits (116), Expect = 1e-20 Identities = 165/232 (71%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||| |||| ||| ||||||| Sbjct 40970901 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTGTCAAAAGGTAGCGGAGGC 40970960 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC---AGTGCAAAGGCAAAAGG 227 ||||| | |||| | | |||| || | || || | |||||||||| | |||| Sbjct 40970961 ATGCAAAGGTTTCCTCGGGT-GGATAGAGAT--TG-GCCCTTGAGTGCAAAGGAAGAAGG 40971016 Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287 | | |||||||| | |||| | ||| | ||||||||||||| |||| ||||||| Sbjct 40971017 GAGCTTGACTGCAAGACCCACCCGTCGAACAGGGACGAAAGTTAACCTTAGTGATCCGAT 40971076 Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| | ||||| || ||||||| || ||||||| ||| || || ||| Sbjct 40971077 AGTGCCAAGTGGAAGGGACGTCGCTTAACAAATAAAAGTTACTCTAGGTATA 40971128 Score = 102 bits (112), Expect = 2e-19 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||||||| |||||||||| | ||||| | | | | |||||| | || Sbjct 1819745 GCCTCCCAAAAGGTAACGGAGGTGTGCAAAGGTTTCTTTGGGCCAGATGGAGATTG-GCC 1819687 Query 208 CAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAA 266 | | | |||||||| | ||||| | |||||||| | |||| | | || ||||||||| Sbjct 1819686 CTCGAATGCAAAGGTAGAAGGGAGCTTGACTGCAAGACCCACCCGCTGAGTAGGGACGAA 1819627 Query 267 AGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGC 326 ||||| |||| ||||||| | |||| || ||||| || ||||||| ||| ||| ||| Sbjct 1819626 AGTCGACCTTAGTGATCCGACAGTGCCGAGTGGAAGGGTAGTCGCTCAACGAATACAAGT 1819567 Query 327 TACCCTGGGGATA 339 ||| || |||||| Sbjct 1819566 TACTCTAGGGATA 1819554 Score = 73.4 bits (80), Expect = 8e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 255 AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCG 314 |||| ||||||||||||| |||| |||||| ||||||| | || || | |||| ||| Sbjct 62556156 AGCAAGGACGAAAGTCGGCCTTAGTGATCCAACGGTGCTAAGTGAAAGGATCGTCACTCA 62556215 Query 315 ACGGATAAAAGCTACCCTGGGGATA 339 || |||||||| || || |||||| Sbjct 62556216 ACAGATAAAAGTTATTCTAGGGATA 62556240 >seq9 Length=70713020 Score = 140 bits (154), Expect = 6e-31 Identities = 172/233 (74%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||| | | || | |||||| ||||||| ||||||||| ||||| |||| Sbjct 18946209 GGGACAATCTTAGATAGACAGTTTCTATGGGGCGTAACCCTCCCAAAAGGTAACAGAGGT 18946268 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAA----CCATGCGCACAGTGCAAAGGCAAAAG 226 | |||| | |||| | ||| ||| | |||| || | |||||||||| ||| Sbjct 18946269 GTGTAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCAT-CG---ATTGCAAAGGCAGAAG 18946324 Query 227 GGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGG 286 || | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| Sbjct 18946325 GGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGA 18946384 Query 287 CGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||||| ||||| ||| || |||| ||||||||||| ||| || ||||| Sbjct 18946385 TGGTGCTGAGTGGAAAGGCTGTTGCTCAACGGATAAAAGTTACTCTAAGGATA 18946437 Score = 91.5 bits (100), Expect = 3e-16 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | || ||| ||||| | |||||||||| ||||||||||| Sbjct 57238649 GGGACAGTCTCAGGTAGACAATTTTTATGGGGTGTAGGCCTCCCAAAAGGTAACGGAGGC 57238590 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 ||||| | ||| | || ||| | | | ||| ||| |||||| | || || Sbjct 57238589 ATACAAAGGTTTCCTTGTGTCAGACGGAGATTA-ACCCACGAGTTCAAAGGTAGAAAGGA 57238531 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||| ||| | |||| | ||| || ||||| ||||||||| |||| ||||||| || Sbjct 57238530 GCTTGATTGCAAGACCCACCCGTCGAGTAGGGATGAAAGTCGGCCTTAGTGATCCGAAGG 57238471 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAA 323 ||| | ||||| || | || ||| || ||||| Sbjct 57238470 TGCCAAGTGGAAAGGTCCTCACTCAACAAATAAA 57238437 >seq4 Length=62178258 Score = 131 bits (144), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||| ||| | |||||| ||||||| ||| |||||| ||||| |||||| Sbjct 11620208 GGACAGTCTCAAGTAGACAGTTTCTATGGGGCGTAGGCCCCCCAAAAGGTAACAGAGGCG 11620267 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATG-CGCAC-AGTGCAAAGGCAAAAGGGT 229 ||||||| |||| | || ||| || | | | |||||||||||| ||||| Sbjct 11620268 TGCAAAGATTTCCTCGGGCCAGAC--AAAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGA 11620325 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | ||| | || |||||||||||||||| | |||| ||||| | ||| Sbjct 11620326 GCTTGACTGCAAGCCCCACCCATCGAGCAGGGACGAAAGTCAGCCTTAGTGATCTGACGG 11620385 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | || ||||| || |||||||| || |||||||| ||| || |||||| Sbjct 11620386 TACCGAGTGGAAGGGTCGTCGCTCAACAGATAAAAGTTACTCTAGGGATA 11620435 Score = 98.7 bits (108), Expect = 2e-18 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 160 GTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAA 218 |||| | ||||| |||| | |||||| ||| ||||| | || | | |||||||| Sbjct 223292 GTAATGAAGGCGTGCAAAAGTTTCCTCAGGCAGGACGGAAATTA-GCCCTCGAGTGCAAA 223350 Query 219 GGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAA 278 || ||||||| | |||||||| | |||| | ||| |||| | ||||||||||| |||| Sbjct 223351 GGTAAAAGGGAGCTTGACTGCAAGACCCACCTGTCAAGCAAGAACGAAAGTCGGCCTTAG 223410 Query 279 TGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338 |||| || | ||| || ||||| || | || |||||| |||| ||| || ||||| Sbjct 223411 TGATTCGACAGTGTCGAGTGGAAAGGTTATTATTCAACGGATTAAAGTTACTCTAGGGAT 223470 Query 339 A 339 | Sbjct 223471 A 223471 Score = 82.4 bits (90), Expect = 1e-13 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 |||||||| | |||| | ||| |||||||||||||||||| |||| | ||||| |||| Sbjct 32381124 TTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTAATCCGATGGTG 32381065 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329 | || || || || | || ||| || |||||||| ||| Sbjct 32381064 CCGAGTGAAAGGGTCATCACTCAACAGATAAAAGTTAC 32381027 >seq10 Length=62175169 Score = 127 bits (140), Expect = 4e-27 Identities = 153/205 (75%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 138 TGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGG 197 ||||||| |||||||||| |||||||||||| ||||| | ||| || ||| || Sbjct 47976335 TGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTTAGGCCGGACGG 47976394 Query 198 AAACCATGCGCAC---AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCT 254 | | || || | |||| ||||||| || || | |||||||| | | || | ||| Sbjct 47976395 AGAT--TG-GCCCTTGAGTGTAAAGGCAGAAAGGAGCTTGACTGCAATATCCACCCGTCG 47976451 Query 255 AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCG 314 |||||||||||||||||| |||| |||||| |||| | ||||| ||||||||||| Sbjct 47976452 AGCAGGGACGAAAGTCGGTCTTAGTGATCCAACGGTATCAAGTGGAAGGGCCGTCGCTCA 47976511 Query 315 ACGGATAAAAGCTACCCTGGGGATA 339 | ||||||||| ||| | |||||| Sbjct 47976512 ATGGATAAAAGTTACTTTAGGGATA 47976536 >seq7 Length=60982465 Score = 120 bits (132), Expect = 6e-25 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATG-C 206 |||||||||| |||| ||||||| |||| | |||||| | ||||||| | ||| | Sbjct 42173887 GCCTCCCAAAAGGTAATGGAGGCGTGTAAAGGTTTCCTCAGGTCGGATGGAGA--ATGGC 42173830 Query 207 GCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265 | | |||||||||||| ||||| | |||| ||| | |||| | ||| |||||||| || Sbjct 42173829 CCTCGAGTGCAAAGGCAGAAGGGAGCTTGATTGCAAAACCCACCCGTCGAGCAGGGATGA 42173770 Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 |||| || |||| ||||||| ||| || ||||| || |||| ||| | |||||| Sbjct 42173769 AAGTTGGCCTTAGTGATCCGATAGTGTCGAGTGGAAGGGTCGTCACTCAAAATATAAAAT 42173710 Query 326 CTACCCTGGGGATA 339 ||| || |||||| Sbjct 42173709 TTACTCTAGGGATA 42173696 Score = 77.0 bits (84), Expect = 6e-12 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 ||||||||||| ||||||| || | ||||| | |||| | | || ||| | | || Sbjct 20143702 GCCTCCCAAAG-GTAACGGGGGTGTGCAAAGGTTTCCTCGGGCTAGACGGAGATTA-GCC 20143759 Query 208 CAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC-CTCAAGTCTAGCAGGGACGA 265 | | ||||||||||||||| || | |||| ||| | ||| || | || || | ||| | Sbjct 20143760 CTCGAGTGCAAAGGCAAAATGGAGCTTGATTGCAAGACCTATCGA-TCGAGAAAGGA-AA 20143817 Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 || | | |||| ||||||| | ||| |||||| || | | |||| | ||||||||| Sbjct 20143818 AACTTGACCTTAGTGATCCGACAGTGTCAAATGGATGGGTCTTTGCTCAATGGATAAAAG 20143877 Query 326 CTACCCTGGGGATA 339 ||| | |||||| Sbjct 20143878 TTACTTTAGGGATA 20143891 >seq5 Length=64140413 Score = 120 bits (132), Expect = 6e-25 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||||| | || | ||||| | ||||| ||||| |||| ||||||||| || Sbjct 49865973 GGACAGTCTTAGGTAGATAGTTTCTATAGGGCGTAGGCCTCTCAAAAGGTAACGGAGACG 49865914 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC--AGTGCAAAGGCAAAAGGGT 229 ||||| | ||| | || ||| | || ||| |||| ||||||| ||||| Sbjct 49865913 TGCAAAGGTTTCCTTGGGCCAGACGGAGAT--TGGGCATTGAGTGTAAAGGCAGAAGGGA 49865856 Query 230 GTTTGACTGCGACACCC-TCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCG 288 | |||| ||| | |||| || | || |||| |||||||||| || |||| ||||||| || Sbjct 49865855 GCTTGATTGCAAGACCCATCCA-TCGAGCAAGGACGAAAGTTGGCCTTAGTGATCCGACG 49865797 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| | ||||| || ||||| |||||||||||||| ||| || |||||| Sbjct 49865796 GTGCCAAGTGGAAGGGTCGTCGTTCGACGGATAAAAGTTACTCTAGGGATA 49865746 >seq12 Length=35429946 Score = 98.7 bits (108), Expect = 2e-18 Identities = 141/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 148 GCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC-AGCTTGGATGGAAACCATGC 206 |||||||||| |||| |||||| ||||| | |||| |||| ||| || | || Sbjct 31138979 GCCTCCCAAAAGGTAATGGAGGCATGCAAAGGTTTCCTCGAGCT-GGACAGAGAT--TGG 31139035 Query 207 GCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGA 265 | | |||||||||||| ||||| |||||| | | | || | ||| |||||||| || Sbjct 31139036 CCTCGAGTGCAAAGGCAGAAGGGACCTTGACTACAAGATCCACTCGTCGAGCAGGGATGA 31139095 Query 266 AAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAG 325 |||| | ||| ||||| | ||||| ||| || || | | || ||| ||||||||||| Sbjct 31139096 AAGTTGACCTTCGTGATCAGACGGTGTTGAGTGCAAGAGTCATCACTCAACGGATAAAAG 31139155 Query 326 CTACCCTGGGGATA 339 ||| || |||||| Sbjct 31139156 TTACTCTAGGGATA 31139169 >seq11 Length=62681010 Score = 93.3 bits (102), Expect = 8e-17 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||||||| ||||| | |||| ||| | | || | ||| ||||||| ||||||| Sbjct 42323727 AGTGCAAAGGCAGAAGGGAGCTTGATTGCAAGAACCACTCGTCAAGCAGGGGAGAAAGTC 42323786 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||| ||||| | | |||| || |||| || |||| || ||||||||||| ||| Sbjct 42323787 AGCCTTAGTGATCTGACAGTGCCGAGTGGATGGGTCGTCACTGAACGGATAAAAGTTACT 42323846 Query 331 CTGGGGATA 339 | |||||| Sbjct 42323847 TTAGGGATA 42323855 >seq6 Length=51074515 Score = 89.7 bits (98), Expect = 1e-15 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||||||| | | | ||| | |||| ||| | | | | || || ||||||||||||| Sbjct 8062641 AGTGCAAAAGTAGATGGGAGCTTGATTGCAAGAACAACCCATCGAGTAGGGACGAAAGTC 8062582 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||||||| ||| ||||| || ||||| || |||| || ||||||||||| ||| Sbjct 8062581 AGCTTTAATGATTCGGTGGTGCCGAGTGGAAGGGTCGTCTTTCAACGGATAAAAGTTACT 8062522 Query 331 CTGGGGATA 339 || |||||| Sbjct 8062521 CTAGGGATA 8062513 Score = 82.4 bits (90), Expect = 1e-13 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 215 CAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274 |||||||| |||| | ||| |||| | |||| | || || ||||||||||||| | Sbjct 19644215 CAAAGGCAGAAGGAAGCTTGGCTGCAAGACCCACCCGTTGAGTAGGGACGAAAGTCAACC 19644156 Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334 ||||| |||| | |||| || ||||| ||| || |||| || |||||||| | | || Sbjct 19644155 TTAATTATCCAACAGTGCCGAGTGGAAGGGCTGTAGCTCAACAGATAAAAGTTGCTCTAA 19644096 Query 335 GGATA 339 ||||| Sbjct 19644095 GGATA 19644091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982389841984