Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq1034 219 8e-55
seq12 176 9e-42
seq11 163 6e-38
seq9 158 2e-36
seq8 147 4e-33
seq5 141 2e-31
seq2 141 2e-31
seq1 140 6e-31
seq6 138 2e-30
seq13 136 8e-30
seq3 136 8e-30
seq4 107 4e-21
seq7 105 1e-20
>seq1034
Length=160161
Score = 219 bits (242), Expect = 8e-55
Identities = 233/305 (76%), Gaps = 18/305 (6%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 105945 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 105886
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 105885 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 105826
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || |
Sbjct 105825 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 105766
Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
|| ||| || || ||| ||||| | | || | |||||||||
Sbjct 105765 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 105722
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||
Sbjct 105721 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 105663
Query 300 CCACT 304
|||||
Sbjct 105662 CCACT 105658
Score = 219 bits (242), Expect = 8e-55
Identities = 233/305 (76%), Gaps = 18/305 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 142871 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 142930
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 142931 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 142990
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || |
Sbjct 142991 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 143050
Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
|| ||| || || ||| ||||| | | || | |||||||||
Sbjct 143051 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 143094
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
|||||||| ||| |||| ||| || |||||||| || ||| ||||||||||||||||
Sbjct 143095 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 143153
Query 300 CCACT 304
|||||
Sbjct 143154 CCACT 143158
>seq12
Length=35429946
Score = 176 bits (194), Expect = 9e-42
Identities = 144/175 (82%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||| | |||| ||||||| | || | ||||| |||||||||||||||
Sbjct 22125537 GGCATTGCTCCGTCAAGCTTTCGCCCATTGCGGAAAACTCCCCATTGCTGCCTCCCGTAG 22125596
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| |||
Sbjct 22125597 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 22125656
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| ||
Sbjct 22125657 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 22125711
Score = 132 bits (146), Expect = 1e-28
Identities = 207/292 (71%), Gaps = 17/292 (6%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||| | |||| |||||||| || || | | | ||||||||||| || |||| |||| |
Sbjct 24050848 TCAAGCTTTCGCCCATTGTAGAAAATTCACTATTGCTGCCTCCCATAAGAGTTTGGGTC- 24050906
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||||| ||| || | ||| ||| | || || |||| ||| ||| ||||||
Sbjct 24050907 TGTCTCAGTCCCAGTGTAGCTGATCATCCTTTTAGACCAACTACTAATCATCGTCTTGGT 24050966
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192
|||||| ||| ||| || |||||| | | |||||||||| | |||| || || |
Sbjct 24050967 AAGCTATTGCATCATCAAATAGCTAATCAGACACGAGCCCATCCTCGAGCG--AATTCCT 24051024
Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252
| ||| ||||| | | || ||||||||| ||||||||| ||
Sbjct 24051025 ---------CCTTTTGC--TCCTCAGTC--TACAGGGTATTAGCAGTCGTTTCCAGCTGT 24051071
Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
| |||| ||| || |||||||| || | | ||||||||||||| || ||||
Sbjct 24051072 TGTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTTCGACACT 24051122
>seq11
Length=62681010
Score = 163 bits (180), Expect = 6e-38
Identities = 134/163 (82%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||||| |||| ||||||||| || || ||||||||||||||| |||||||||||||||||
Sbjct 21503270 TCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCTCGTAGGAGTCTGGGCCG 21503211
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||||| |||||||| ||| ||||| | || |||| ||| ||| |||||
Sbjct 21503210 TGTCTCAGTCCCAGTGTGGCCGATCATCCTCTTGGACCAACTACTAATCATCGCTTTGGT 21503151
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|||||| ||||||||||| ||||| | ||| ||||| ||
Sbjct 21503150 AAGCTATTGCCTCACCAACTAGCTAATTAGACGCAAGCCCCTC 21503108
Score = 136 bits (150), Expect = 8e-30
Identities = 211/299 (71%), Gaps = 18/299 (6%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | ||||| |||| || ||| | || || ||||||| ||||||| | |||||||||
Sbjct 22254561 GCTCCGTCAGGCTTTCACCTATTACGAAAAATTCCCCACTACTGCCTCTCTTAGGAGTCT 22254620
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||| ||| ||||| | |||||| | ||| ||| || | || ||||| |||| | |
Sbjct 22254621 AACTCGTTTCTTAGTCCAAGTGTGGCTGATCATCCTATCGGACCAGCTACTGATCATTGC 22254680
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GAT 185
||| || |||||| ||||||||||| |||||| ||||||||| || | || |||
Sbjct 22254681 CTTAGTAAGCTATTGCCTCACCAACTAACTAATCAAACGCGAGCCCCTCCTGGGGCAGAT 22254740
Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245
||||| ||| ||||| | | |||| |||||||| ||||||
Sbjct 22254741 TCCTCTTT------------TTGC--TCCTCAGCC--TATGGCGTATTAGCAGCCGTTTC 22254784
Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
|| ||| |||| ||| |||| | ||| || ||| ||||||||||| |||||||||
Sbjct 22254785 CAGCTGTTGTTCCCCTCCCAAAGATA-GTTCCTTACGCGTTACTCACCCTTCCGCCACT 22254842
>seq9
Length=70713020
Score = 158 bits (174), Expect = 2e-36
Identities = 129/157 (82%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78
|||| || |||||| || || ||| ||||||||||||||| |||||||||||||||||
Sbjct 46544133 TTTCGCCTATTGTGGAAAATTTTCCATTGCTGCCTCCCGTAGAAGTCTGGGCCGTGTCTC 46544074
Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTA 138
|||| || |||||| | ||| |||||| | || ||||| |||| ||| |||||| ||||
Sbjct 46544073 AGTCGCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTA 46544014
Query 139 TTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|| ||||||||||| |||||| | ||||||||| ||
Sbjct 46544013 TTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 46543977
>seq8
Length=57128820
Score = 147 bits (162), Expect = 4e-33
Identities = 211/294 (72%), Gaps = 19/294 (6%)
Strand=Plus/Plus
Query 5 TCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGT 64
||||| | | ||| ||| ||||||| | || || ||||||||||| |||||||| ||||
Sbjct 39662971 TCGCTCCGTTAGGTTTTTGCCCATTGCGAAAAATTCCCCACTGCTGACTCCCGTAAGAGT 39663030
Query 65 CTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTC 124
|| || ||||||||| || || | |||| | ||| |||||| || |||| |||| ||
Sbjct 39663031 CTAGGTCGTGTCTCAATCTCAGTATGGCTGATCATCCTCTCGAACCAACTACTGATCATC 39663090
Query 125 GGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-G 183
| ||| || |||||| ||||||||||| || ||| | |||||||| || | | | |
Sbjct 39663091 GCCTTAGTAAGCTATTGCCTCACCAACTAGCT-ATCAGATGCGAGCCCCTCCTCAAACGG 39663149
Query 184 ATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTT 243
|| || || ||| ||||| | | || | ||||||||| | |||
Sbjct 39663150 ATCCCTCCTT------------TTGC--TCCTCAGCC--TACGAGGTATTAGCAGTTGTT 39663193
Query 244 TCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTC 297
||||| || |||||||| ||||| ||||| || ||| ||||||||||||||
Sbjct 39663194 TCCAACTATTGTTCCACTCCCAAAGGGAGGTT-CTTACGCGTTACTCACCCGTC 39663246
>seq5
Length=64140413
Score = 141 bits (156), Expect = 2e-31
Identities = 131/166 (79%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| | |||| ||| ||||||| | || || | ||| |||||||| ||||| |||||
Sbjct 8966951 GCTCCGTCAGACTTTAACCCATTGCGAAAAATTCTCCATTGCTGCCTTTCGTAGAAGTCT 8966892
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
| |||||||||||||||| |||||| | ||| |||||| | || ||||| |||| |||
Sbjct 8966891 AGACCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGC 8966832
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCC 172
|||| | |||||| ||||||||||| |||||| | |||||||||
Sbjct 8966831 CTTGATAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCC 8966786
Score = 140 bits (154), Expect = 6e-31
Identities = 207/292 (71%), Gaps = 16/292 (5%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||| | |||| || |||| || || ||||||| ||||||||| |||||||||||||||
Sbjct 49871720 TCAAGCTTTCGCCTATTGCAAAAAATTCCCCACTACTGCCTCCCCTAGGAGTCTGGGCCG 49871779
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||| | ||| | | ||| |||||| | || |||| |||| ||| ||||||
Sbjct 49871780 TGTCTCAGTCCTAGTGTAGTTGATCATCCTCTCGGACCAACTACTGATCATCGCCTTGGT 49871839
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192
|||||| ||||||||||| ||||| || ||| | || | ||| || || |
Sbjct 49871840 AAGCTATTGCCTCACCAACTAGCTAATGAAACGTGAGACTCTCATCGGGCG--AATTCCT 49871897
Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252
| | ||||| | | || | |||||| || |||||||||| ||
Sbjct 49871898 CCTTTTA-----------CTCCTCAGCC--TACGGGGTATTCGCAGTCGTTTCCAATTGT 49871944
Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
| |||| ||| || | ||||| || | | |||||||||||||||||||||
Sbjct 49871945 TGTTCCCCTCCCAAGCGTAGGTT-CTTATGCGTTACTCACCCGTCCGCCACT 49871995
>seq2
Length=62769430
Score = 141 bits (156), Expect = 2e-31
Identities = 137/175 (78%), Gaps = 1/175 (1%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||| || ||||||| |||
Sbjct 7320974 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCAGTGTTGCCTCCTGTAA 7321033
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||| ||||||||||| ||| |||||| ||| ||| || | || ||||| |||
Sbjct 7321034 GAGTCTGGGTCGTGTCTCAGT-CCAGTGTGGCTAATCACCCTTTCGGGCCAGCTACTGAT 7321092
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||||| |||||| ||||||||||| |||||| | || |||||| ||
Sbjct 7321093 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCTC 7321147
Score = 127 bits (140), Expect = 4e-27
Identities = 205/292 (70%), Gaps = 16/292 (5%)
Strand=Plus/Minus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||||| |||| ||||||| || || ||||||| ||| ||||| ||||||||| || ||
Sbjct 30562049 TCAGGCTTTCGCCCATTGCAGAAAATTCCCCACTACTGTCTCCCATAGGAGTCTAGGTCG 30561990
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||||||||| | |||| | | ||| |||||| | || || || || | | | ||| ||
Sbjct 30561989 TGTCTCAGTCCTAGTGTGCCTGGTCATCCTCTCGGACCAGCCACTGACCATTGCCTTAGT 30561930
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192
|||||| ||||||||||| |||||| | ||||||| || | |||| | || |
Sbjct 30561929 AAGCTATTGCCTCACCAACTAGCTAATCAAACACGAGCCCCTCCTCGAGCG--GATTCCT 30561872
Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252
| | | | | || || ||| |||||||| |||||||| ||
Sbjct 30561871 CGTTTTACTCCTTA-GC---CCACTG---------GGTATTAGTAGCCGTTTCCAGCTGT 30561825
Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
| |||| || | || ||||| || ||| |||||||||||||||||||||
Sbjct 30561824 TGTTCCCTTCCCAGTGGTAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 30561774
Score = 113 bits (124), Expect = 9e-23
Identities = 165/231 (71%), Gaps = 18/231 (8%)
Strand=Plus/Plus
Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134
||||| ||||| |||||| | ||| |||||| | | ||||| |||| ||| ||||||
Sbjct 2002324 TCTCAATCCCAGTGTGGCTGATCATCCTCTCGGACTAGCTACTGATCATCGCCTTGGTAA 2002383
Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCTTT 193
| |||| ||||||||||| |||||| | ||||||||| || | || ||| || ||
Sbjct 2002384 GTTATTTCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCAGGCGGATTCCTCCTT 2002443
Query 194 GGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTT 253
||| ||||| | | || | ||||||||| |||||||| |||
Sbjct 2002444 ------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTT 2002487
Query 254 ATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
|||| ||| || |||||||| || | | |||||||||||||||||||||
Sbjct 2002488 GTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCGCCACT 2002537
>seq1
Length=55868233
Score = 140 bits (154), Expect = 6e-31
Identities = 107/127 (84%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 44 ACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTC 103
|||||||||||||| ||||||||||||||||||||||||||| |||||| | ||| ||||
Sbjct 16800396 ACTGCTGCCTCCCGCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTC 16800337
Query 104 TCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGC 163
|||| | |||| |||| ||| |||||| |||||| ||||||||||| |||| | |
Sbjct 16800336 TCAGACTAGCTATTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAACCAGA 16800277
Query 164 CGCGAGC 170
|||||||
Sbjct 16800276 CGCGAGC 16800270
Score = 118 bits (130), Expect = 2e-24
Identities = 131/175 (75%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||| ||| ||||||| || || |||| | |||||||| ||||
Sbjct 41108880 GGCATTGCTCTATCAGAATTTTGCCCATTGCAAAAAATTTCCCATTACTGCCTCCTGTAG 41108821
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||| |||||||||||||| ||||| ||| | | || | || ||||| |||
Sbjct 41108820 GAGTCTGGGTTGTGTCTCAGTCCCAGCGTGGCTAATCATCTTTTCGGACCAGCTACTGAT 41108761
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||||| |||||| || |||||||| ||||| | |||||||| ||
Sbjct 41108760 CATCGCCTTGGTAAGCTATTGCCTTACCAACTAGTTAATCAGATGCGAGCCCCTC 41108706
Score = 93.3 bits (102), Expect = 8e-17
Identities = 118/161 (73%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 15 AGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 74
||| ||| |||||||| || || |||||| |||| | || |||||| |||| | ||
Sbjct 4239254 AGGCTTTTTCCCATTGTTGAAAATTTCCCACTACTGCTTTCCAAAGGAGTTTGGGTCATG 4239313
Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134
||||||||||| |||||| ||| | | ||| || ||| |||| | | |||| |
Sbjct 4239314 TCTCAGTCCCAGTGTGGCTAATCATCTTTTCA-ACCACCTATTGATCATAGCCTTGTTTT 4239372
Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|||||| ||||||||||| ||||| | |||||||| ||
Sbjct 4239373 GCTATTTCCTCACCAACTAATTAATCAGATGCGAGCCCTTC 4239413
>seq6
Length=51074515
Score = 138 bits (152), Expect = 2e-30
Identities = 207/295 (70%), Gaps = 22/295 (7%)
Strand=Plus/Plus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||||| |||| ||||||| | || || |||||||||| |||| ||||||||||| ||
Sbjct 37362156 TCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTACCTCTTATAGGAGTCTGGTTCG 37362215
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
||||| ||||||| |||||| | ||| ||| | | || |||| |||| ||| ||||||
Sbjct 37362216 TGTCTTAGTCCCAGTGTGGCTGATCATCCTATTGGACCAGCTATTGATCATCGCCTTGGT 37362275
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATC- 190
|||||| ||||||||||| ||||| | ||| ||||| | || ||| ||| ||
Sbjct 37362276 AAGCTATTGCCTCACCAACTAGCTAATTAGACGCAAGCCCCTTATTGAGCGGATTCCTCC 37362335
Query 191 -TTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAA 249
|||| ||| | | ||| | ||||||||| ||||||||||
Sbjct 37362336 TTTTGCTCA------------------TTAGCTTACGGGGTATTAGCAGTCGTTTCCAAC 37362377
Query 250 CGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304
|| |||| |||| || |||| ||| || | | | |||||| |||| || |||
Sbjct 37362378 TATTGTTCCCCTCTCAAGGGCAAGTT-CTTATGCGCTACTCATTCGTCTGCTACT 37362431
Score = 113 bits (124), Expect = 9e-23
Identities = 130/175 (74%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| |||||| |||| | |||| | | || || || | ||| | ||||
Sbjct 14390126 GGCATTGCTTCATCAGACTTTCGTCAATTGCGGAGAATTTTGCATTGTTTCCTTCTGTAG 14390067
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||| || |||||||||||||| |||||| | ||| |||||| | || |||| |||
Sbjct 14390066 GAGTCTGAGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTATTGAT 14390007
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| || |||||| |||||| ||||||||||| |||||| ||||| ||| ||
Sbjct 14390006 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAAACGCGAACCCCTC 14389952
Score = 73.4 bits (80), Expect = 8e-11
Identities = 75/98 (77%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140
||||| |||||| | ||| | || | | || ||||| |||| || |||||| ||||||
Sbjct 20401408 TCCCAGTGTGGCTGATCATCTTCGCGGACCAGCTACTGATCATCATCTTGGTAAGCTATT 20401349
Query 141 ATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178
||||||||||| |||||| | | | |||||||| ||
Sbjct 20401348 GCCTCACCAACTAGCTAATCAGACACAAGCCCATCCTT 20401311
>seq13
Length=58321163
Score = 136 bits (150), Expect = 8e-30
Identities = 128/163 (79%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72
||| | ||| || |||| | || || ||||| |||| |||||| |||||||||||||||
Sbjct 17238706 TCAAGCTTTTGCCGATTGCGAAAAATTCCCCATTGCTCCCTCCCATAGGAGTCTGGGCCG 17238647
Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132
|||||||||| || |||||| | ||| ||| || | | ||||| ||| ||| ||| ||
Sbjct 17238646 TGTCTCAGTCTCAGTGTGGCTGATCATCCTTTCGGACTAGCTACTAATCATCGCCTTTGT 17238587
Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
|||||| ||||||||||| |||||| | ||||||||| ||
Sbjct 17238586 AAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 17238544
Score = 136 bits (150), Expect = 8e-30
Identities = 122/153 (80%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| ||||||
Sbjct 52725109 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 52725050
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||||||||||| |||||| | ||| || || || |||| ||| | ||
Sbjct 52725049 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 52724990
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 52724989 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 52724957
Score = 134 bits (148), Expect = 3e-29
Identities = 122/154 (79%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||||| | |||| ||||||| | || || ||||||| ||||||||| || ||||||
Sbjct 4791821 GCTCCATCAAGCTTTCGCCCATTGCGAAAAATACCCCACTACTGCCTCCCCTAAGAGTCT 4791762
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||||||||||| ||||||| | ||| | | | |||||| || |||| |||| |||
Sbjct 4791761 GGGCCGTGTCTTAGTCCCAGTTTGGTCAATTATCCTCTCGAACCAACTACTGATCATCGC 4791702
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160
|||||| |||||| ||||||||||| ||||||
Sbjct 4791701 CTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 4791668
Score = 116 bits (128), Expect = 7e-24
Identities = 127/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 15 AGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 74
||| |||| |||||| | || || |||||| ||||||||| ||||| | |||| ||||
Sbjct 28621228 AGGCTTTCGTCCATTGCGAAAAATTTCCCACTACTGCCTCCCATAGGATTTTGGGTCGTG 28621287
Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134
| | |||||||||||||| | ||| |||| | | || |||| ||| ||| ||| |
Sbjct 28621288 TATTAGTCCCAATGTGGCTGGTCATCCTCGCTGACCAACTACTAATCATCGCCTTCATAA 28621347
Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG 183
|| ||| ||||||||||| |||||| | ||| ||||| || | ||||
Sbjct 28621348 GCCATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTCAAGCG 28621396
Score = 73.4 bits (80), Expect = 8e-11
Identities = 48/53 (91%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 53 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105
||||||||||||||||||| |||||||||||||||||| | | ||| ||||||
Sbjct 56429230 TCCCGTAGGAGTCTGGGCCATGTCTCAGTCCCAATGTGACTGATCATCCTCTC 56429282
>seq3
Length=45765648
Score = 136 bits (150), Expect = 8e-30
Identities = 129/165 (78%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
||| ||| ||| ||| || |||||| || || | ||| ||||||||||| |||||||||
Sbjct 44074844 GCTCCATTAGGCTTTTTCCAATTGTGGAAAATTCTCCATTGCTGCCTCCCATAGGAGTCT 44074903
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
||| ||||||||||||||| |||| | | ||| | | || || ||||| |||| |||
Sbjct 44074904 GGGTCGTGTCTCAGTCCCAGTGTGACTGATCATCATTTCGAACCAGCTACTGATCATCGC 44074963
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCC 171
|||||| ||||| |||||||||||| |||||| | | | ||||
Sbjct 44074964 CTTGGTAAACTATTGTCTCACCAACTAGCTAATCAGACACAAGCC 44075008
>seq4
Length=62178258
Score = 107 bits (118), Expect = 4e-21
Identities = 125/169 (74%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75
|| |||| ||||||||| || || ||| ||| |||||||||||| ||||| | || |||
Sbjct 46209978 GGCTTTCACCCATTGTGGAAAATTCCCTACTCTTGCCTCCCGTAGAAGTCTAGACCATGT 46209919
Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135
|| ||||| | |||| | ||| ||||| | || ||||| ||| ||| ||||| |
Sbjct 46209918 CTTAGTCCTAGCGTGGTTGATCATCCTCTTGGACCAGCTACTAATCATCGCATTGGTAAG 46209859
Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGA 184
|||||| |||| |||||| |||| | ||| | ||| || || | |||
Sbjct 46209858 CTATTACCTCATCAACTAGATAATTAGACGCAAACCCCTCCTTGAACGA 46209810
Score = 95.1 bits (104), Expect = 2e-17
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78
|||| || ||||| || || ||||||| ||||||| ||||||||||||| || |||||
Sbjct 25536751 TTTCGCCTATTGTAGAAAATTCCCCACTATTGCCTCCAGTAGGAGTCTGGGACGCGTCTC 25536692
Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130
||||||| |||||| | ||| ||||| | | ||||| ||| ||| ||||
Sbjct 25536691 AGTCCCAGTGTGGCTGATCATCCTCTTGGACTAGCTACTAATCATCGCCTTG 25536640
>seq7
Length=60982465
Score = 105 bits (116), Expect = 1e-20
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66
|||| ||| || |||| |||||||| ||| || || |||||||||| |||| ||||||
Sbjct 59792609 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCTCACTGCTGCCCACCGTGGGAGTCC 59792550
Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126
| | |||||| ||||||| ||||| | ||| || || || |||| ||| | ||
Sbjct 59792549 GAGTTGTGTCTTAGTCCCAGCGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 59792490
Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||||| || ||| || ||||||||||||||
Sbjct 59792489 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 59792457
Score = 98.7 bits (108), Expect = 2e-18
Identities = 108/144 (75%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75
|| |||| |||||||| ||| || ||||||||||||| | || |||||| ||| |||||
Sbjct 59743280 GGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCATGTGGGAGTCCGGGTCGTGT 59743339
Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135
|||||||||| ||| || ||| | || || |||| ||| | |||||||| |
Sbjct 59743340 CTCAGTCCCACTGTAGCTAATCATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAG 59743399
Query 136 CTATTATCTCACCAACTACCTAAT 159
| ||| || ||| ||||||||||
Sbjct 59743400 CCTTTACCTAACCGACTACCTAAT 59743423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 998389676544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |