Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1034 219 8e-55 seq12 176 9e-42 seq11 163 6e-38 seq9 158 2e-36 seq8 147 4e-33 seq5 141 2e-31 seq2 141 2e-31 seq1 140 6e-31 seq6 138 2e-30 seq13 136 8e-30 seq3 136 8e-30 seq4 107 4e-21 seq7 105 1e-20 >seq1034 Length=160161 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 105945 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 105886 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 105885 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 105826 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 105825 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 105766 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 105765 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 105722 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 105721 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 105663 Query 300 CCACT 304 ||||| Sbjct 105662 CCACT 105658 Score = 219 bits (242), Expect = 8e-55 Identities = 233/305 (76%), Gaps = 18/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 142871 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 142930 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 142931 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 142990 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || | Sbjct 142991 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGG 143050 Query 181 GC-GATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 || ||| || || ||| ||||| | | || | ||||||||| Sbjct 143051 GCGGATTCCTCCTT------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGC 143094 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||||||| ||| |||| ||| || |||||||| || ||| |||||||||||||||| Sbjct 143095 CGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTACGCGTTACTCACCCGTCCG 143153 Query 300 CCACT 304 ||||| Sbjct 143154 CCACT 143158 >seq12 Length=35429946 Score = 176 bits (194), Expect = 9e-42 Identities = 144/175 (82%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||| | |||| ||||||| | || | ||||| ||||||||||||||| Sbjct 22125537 GGCATTGCTCCGTCAAGCTTTCGCCCATTGCGGAAAACTCCCCATTGCTGCCTCCCGTAG 22125596 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||| | || ||||| ||| Sbjct 22125597 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 22125656 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || Sbjct 22125657 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 22125711 Score = 132 bits (146), Expect = 1e-28 Identities = 207/292 (71%), Gaps = 17/292 (6%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | |||| |||||||| || || | | | ||||||||||| || |||| |||| | Sbjct 24050848 TCAAGCTTTCGCCCATTGTAGAAAATTCACTATTGCTGCCTCCCATAAGAGTTTGGGTC- 24050906 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| ||| || | ||| ||| | || || |||| ||| ||| |||||| Sbjct 24050907 TGTCTCAGTCCCAGTGTAGCTGATCATCCTTTTAGACCAACTACTAATCATCGTCTTGGT 24050966 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192 |||||| ||| ||| || |||||| | | |||||||||| | |||| || || | Sbjct 24050967 AAGCTATTGCATCATCAAATAGCTAATCAGACACGAGCCCATCCTCGAGCG--AATTCCT 24051024 Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252 | ||| ||||| | | || ||||||||| ||||||||| || Sbjct 24051025 ---------CCTTTTGC--TCCTCAGTC--TACAGGGTATTAGCAGTCGTTTCCAGCTGT 24051071 Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 | |||| ||| || |||||||| || | | ||||||||||||| || |||| Sbjct 24051072 TGTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTTCGACACT 24051122 >seq11 Length=62681010 Score = 163 bits (180), Expect = 6e-38 Identities = 134/163 (82%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||||| || || ||||||||||||||| ||||||||||||||||| Sbjct 21503270 TCAGGCTTTCGCCCATTGTGGAAAATTCCCCACTGCTGCCTCTCGTAGGAGTCTGGGCCG 21503211 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||||| |||||||| ||| ||||| | || |||| ||| ||| ||||| Sbjct 21503210 TGTCTCAGTCCCAGTGTGGCCGATCATCCTCTTGGACCAACTACTAATCATCGCTTTGGT 21503151 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| ||||||||||| ||||| | ||| ||||| || Sbjct 21503150 AAGCTATTGCCTCACCAACTAGCTAATTAGACGCAAGCCCCTC 21503108 Score = 136 bits (150), Expect = 8e-30 Identities = 211/299 (71%), Gaps = 18/299 (6%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| || ||| | || || ||||||| ||||||| | ||||||||| Sbjct 22254561 GCTCCGTCAGGCTTTCACCTATTACGAAAAATTCCCCACTACTGCCTCTCTTAGGAGTCT 22254620 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| ||| ||||| | |||||| | ||| ||| || | || ||||| |||| | | Sbjct 22254621 AACTCGTTTCTTAGTCCAAGTGTGGCTGATCATCCTATCGGACCAGCTACTGATCATTGC 22254680 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GAT 185 ||| || |||||| ||||||||||| |||||| ||||||||| || | || ||| Sbjct 22254681 CTTAGTAAGCTATTGCCTCACCAACTAACTAATCAAACGCGAGCCCCTCCTGGGGCAGAT 22254740 Query 186 AAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTC 245 ||||| ||| ||||| | | |||| |||||||| |||||| Sbjct 22254741 TCCTCTTT------------TTGC--TCCTCAGCC--TATGGCGTATTAGCAGCCGTTTC 22254784 Query 246 CAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| |||| ||| |||| | ||| || ||| ||||||||||| ||||||||| Sbjct 22254785 CAGCTGTTGTTCCCCTCCCAAAGATA-GTTCCTTACGCGTTACTCACCCTTCCGCCACT 22254842 >seq9 Length=70713020 Score = 158 bits (174), Expect = 2e-36 Identities = 129/157 (82%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78 |||| || |||||| || || ||| ||||||||||||||| ||||||||||||||||| Sbjct 46544133 TTTCGCCTATTGTGGAAAATTTTCCATTGCTGCCTCCCGTAGAAGTCTGGGCCGTGTCTC 46544074 Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTA 138 |||| || |||||| | ||| |||||| | || ||||| |||| ||| |||||| |||| Sbjct 46544073 AGTCGCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTA 46544014 Query 139 TTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 || ||||||||||| |||||| | ||||||||| || Sbjct 46544013 TTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 46543977 >seq8 Length=57128820 Score = 147 bits (162), Expect = 4e-33 Identities = 211/294 (72%), Gaps = 19/294 (6%) Strand=Plus/Plus Query 5 TCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGT 64 ||||| | | ||| ||| ||||||| | || || ||||||||||| |||||||| |||| Sbjct 39662971 TCGCTCCGTTAGGTTTTTGCCCATTGCGAAAAATTCCCCACTGCTGACTCCCGTAAGAGT 39663030 Query 65 CTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTC 124 || || ||||||||| || || | |||| | ||| |||||| || |||| |||| || Sbjct 39663031 CTAGGTCGTGTCTCAATCTCAGTATGGCTGATCATCCTCTCGAACCAACTACTGATCATC 39663090 Query 125 GGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-G 183 | ||| || |||||| ||||||||||| || ||| | |||||||| || | | | | Sbjct 39663091 GCCTTAGTAAGCTATTGCCTCACCAACTAGCT-ATCAGATGCGAGCCCCTCCTCAAACGG 39663149 Query 184 ATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTT 243 || || || ||| ||||| | | || | ||||||||| | ||| Sbjct 39663150 ATCCCTCCTT------------TTGC--TCCTCAGCC--TACGAGGTATTAGCAGTTGTT 39663193 Query 244 TCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTC 297 ||||| || |||||||| ||||| ||||| || ||| |||||||||||||| Sbjct 39663194 TCCAACTATTGTTCCACTCCCAAAGGGAGGTT-CTTACGCGTTACTCACCCGTC 39663246 >seq5 Length=64140413 Score = 141 bits (156), Expect = 2e-31 Identities = 131/166 (79%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | |||| ||| ||||||| | || || | ||| |||||||| ||||| ||||| Sbjct 8966951 GCTCCGTCAGACTTTAACCCATTGCGAAAAATTCTCCATTGCTGCCTTTCGTAGAAGTCT 8966892 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 | |||||||||||||||| |||||| | ||| |||||| | || ||||| |||| ||| Sbjct 8966891 AGACCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGC 8966832 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCC 172 |||| | |||||| ||||||||||| |||||| | ||||||||| Sbjct 8966831 CTTGATAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCC 8966786 Score = 140 bits (154), Expect = 6e-31 Identities = 207/292 (71%), Gaps = 16/292 (5%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | |||| || |||| || || ||||||| ||||||||| ||||||||||||||| Sbjct 49871720 TCAAGCTTTCGCCTATTGCAAAAAATTCCCCACTACTGCCTCCCCTAGGAGTCTGGGCCG 49871779 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||| | ||| | | ||| |||||| | || |||| |||| ||| |||||| Sbjct 49871780 TGTCTCAGTCCTAGTGTAGTTGATCATCCTCTCGGACCAACTACTGATCATCGCCTTGGT 49871839 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192 |||||| ||||||||||| ||||| || ||| | || | ||| || || | Sbjct 49871840 AAGCTATTGCCTCACCAACTAGCTAATGAAACGTGAGACTCTCATCGGGCG--AATTCCT 49871897 Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252 | | ||||| | | || | |||||| || |||||||||| || Sbjct 49871898 CCTTTTA-----------CTCCTCAGCC--TACGGGGTATTCGCAGTCGTTTCCAATTGT 49871944 Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 | |||| ||| || | ||||| || | | ||||||||||||||||||||| Sbjct 49871945 TGTTCCCCTCCCAAGCGTAGGTT-CTTATGCGTTACTCACCCGTCCGCCACT 49871995 >seq2 Length=62769430 Score = 141 bits (156), Expect = 2e-31 Identities = 137/175 (78%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || |||| || ||||||| ||| Sbjct 7320974 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTTCCCAGTGTTGCCTCCTGTAA 7321033 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||| ||||||||||| ||| |||||| ||| ||| || | || ||||| ||| Sbjct 7321034 GAGTCTGGGTCGTGTCTCAGT-CCAGTGTGGCTAATCACCCTTTCGGGCCAGCTACTGAT 7321092 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | || |||||| || Sbjct 7321093 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCTC 7321147 Score = 127 bits (140), Expect = 4e-27 Identities = 205/292 (70%), Gaps = 16/292 (5%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| || || ||||||| ||| ||||| ||||||||| || || Sbjct 30562049 TCAGGCTTTCGCCCATTGCAGAAAATTCCCCACTACTGTCTCCCATAGGAGTCTAGGTCG 30561990 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||||||||| | |||| | | ||| |||||| | || || || || | | | ||| || Sbjct 30561989 TGTCTCAGTCCTAGTGTGCCTGGTCATCCTCTCGGACCAGCCACTGACCATTGCCTTAGT 30561930 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTT 192 |||||| ||||||||||| |||||| | ||||||| || | |||| | || | Sbjct 30561929 AAGCTATTGCCTCACCAACTAGCTAATCAAACACGAGCCCCTCCTCGAGCG--GATTCCT 30561872 Query 193 TGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGT 252 | | | | | || || ||| |||||||| |||||||| || Sbjct 30561871 CGTTTTACTCCTTA-GC---CCACTG---------GGTATTAGTAGCCGTTTCCAGCTGT 30561825 Query 253 TATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 | |||| || | || ||||| || ||| ||||||||||||||||||||| Sbjct 30561824 TGTTCCCTTCCCAGTGGTAGGTT-CTTACGCGTTACTCACCCGTCCGCCACT 30561774 Score = 113 bits (124), Expect = 9e-23 Identities = 165/231 (71%), Gaps = 18/231 (8%) Strand=Plus/Plus Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134 ||||| ||||| |||||| | ||| |||||| | | ||||| |||| ||| |||||| Sbjct 2002324 TCTCAATCCCAGTGTGGCTGATCATCCTCTCGGACTAGCTACTGATCATCGCCTTGGTAA 2002383 Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATCTTT 193 | |||| ||||||||||| |||||| | ||||||||| || | || ||| || || Sbjct 2002384 GTTATTTCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCAGGCGGATTCCTCCTT 2002443 Query 194 GGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTT 253 ||| ||||| | | || | ||||||||| |||||||| ||| Sbjct 2002444 ------------TTGC--TCCTCAGCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTT 2002487 Query 254 ATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 |||| ||| || |||||||| || | | ||||||||||||||||||||| Sbjct 2002488 GTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCGCCACT 2002537 >seq1 Length=55868233 Score = 140 bits (154), Expect = 6e-31 Identities = 107/127 (84%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 44 ACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTC 103 |||||||||||||| ||||||||||||||||||||||||||| |||||| | ||| |||| Sbjct 16800396 ACTGCTGCCTCCCGCAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTC 16800337 Query 104 TCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGC 163 |||| | |||| |||| ||| |||||| |||||| ||||||||||| |||| | | Sbjct 16800336 TCAGACTAGCTATTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAACCAGA 16800277 Query 164 CGCGAGC 170 ||||||| Sbjct 16800276 CGCGAGC 16800270 Score = 118 bits (130), Expect = 2e-24 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||| ||| ||||||| || || |||| | |||||||| |||| Sbjct 41108880 GGCATTGCTCTATCAGAATTTTGCCCATTGCAAAAAATTTCCCATTACTGCCTCCTGTAG 41108821 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||| |||||||||||||| ||||| ||| | | || | || ||||| ||| Sbjct 41108820 GAGTCTGGGTTGTGTCTCAGTCCCAGCGTGGCTAATCATCTTTTCGGACCAGCTACTGAT 41108761 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| || |||||||| ||||| | |||||||| || Sbjct 41108760 CATCGCCTTGGTAAGCTATTGCCTTACCAACTAGTTAATCAGATGCGAGCCCCTC 41108706 Score = 93.3 bits (102), Expect = 8e-17 Identities = 118/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 15 AGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 74 ||| ||| |||||||| || || |||||| |||| | || |||||| |||| | || Sbjct 4239254 AGGCTTTTTCCCATTGTTGAAAATTTCCCACTACTGCTTTCCAAAGGAGTTTGGGTCATG 4239313 Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134 ||||||||||| |||||| ||| | | ||| || ||| |||| | | |||| | Sbjct 4239314 TCTCAGTCCCAGTGTGGCTAATCATCTTTTCA-ACCACCTATTGATCATAGCCTTGTTTT 4239372 Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| ||||||||||| ||||| | |||||||| || Sbjct 4239373 GCTATTTCCTCACCAACTAATTAATCAGATGCGAGCCCTTC 4239413 >seq6 Length=51074515 Score = 138 bits (152), Expect = 2e-30 Identities = 207/295 (70%), Gaps = 22/295 (7%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| | || || |||||||||| |||| ||||||||||| || Sbjct 37362156 TCAGGCTTTCGCCCATTGCGAAAAATTCCCCACTGCTACCTCTTATAGGAGTCTGGTTCG 37362215 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 ||||| ||||||| |||||| | ||| ||| | | || |||| |||| ||| |||||| Sbjct 37362216 TGTCTTAGTCCCAGTGTGGCTGATCATCCTATTGGACCAGCTATTGATCATCGCCTTGGT 37362275 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGC-GATAAATC- 190 |||||| ||||||||||| ||||| | ||| ||||| | || ||| ||| || Sbjct 37362276 AAGCTATTGCCTCACCAACTAGCTAATTAGACGCAAGCCCCTTATTGAGCGGATTCCTCC 37362335 Query 191 -TTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAA 249 |||| ||| | | ||| | ||||||||| |||||||||| Sbjct 37362336 TTTTGCTCA------------------TTAGCTTACGGGGTATTAGCAGTCGTTTCCAAC 37362377 Query 250 CGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| |||| || |||| ||| || | | | |||||| |||| || ||| Sbjct 37362378 TATTGTTCCCCTCTCAAGGGCAAGTT-CTTATGCGCTACTCATTCGTCTGCTACT 37362431 Score = 113 bits (124), Expect = 9e-23 Identities = 130/175 (74%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| | |||| | | || || || | ||| | |||| Sbjct 14390126 GGCATTGCTTCATCAGACTTTCGTCAATTGCGGAGAATTTTGCATTGTTTCCTTCTGTAG 14390067 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||| || |||||||||||||| |||||| | ||| |||||| | || |||| ||| Sbjct 14390066 GAGTCTGAGCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTATTGAT 14390007 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | || |||||| |||||| ||||||||||| |||||| ||||| ||| || Sbjct 14390006 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAAACGCGAACCCCTC 14389952 Score = 73.4 bits (80), Expect = 8e-11 Identities = 75/98 (77%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 81 TCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATT 140 ||||| |||||| | ||| | || | | || ||||| |||| || |||||| |||||| Sbjct 20401408 TCCCAGTGTGGCTGATCATCTTCGCGGACCAGCTACTGATCATCATCTTGGTAAGCTATT 20401349 Query 141 ATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 ||||||||||| |||||| | | | |||||||| || Sbjct 20401348 GCCTCACCAACTAGCTAATCAGACACAAGCCCATCCTT 20401311 >seq13 Length=58321163 Score = 136 bits (150), Expect = 8e-30 Identities = 128/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | ||| || |||| | || || ||||| |||| |||||| ||||||||||||||| Sbjct 17238706 TCAAGCTTTTGCCGATTGCGAAAAATTCCCCATTGCTCCCTCCCATAGGAGTCTGGGCCG 17238647 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 |||||||||| || |||||| | ||| ||| || | | ||||| ||| ||| ||| || Sbjct 17238646 TGTCTCAGTCTCAGTGTGGCTGATCATCCTTTCGGACTAGCTACTAATCATCGCCTTTGT 17238587 Query 133 GGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| ||||||||||| |||||| | ||||||||| || Sbjct 17238586 AAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 17238544 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 52725109 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 52725050 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 52725049 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 52724990 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 52724989 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 52724957 Score = 134 bits (148), Expect = 3e-29 Identities = 122/154 (79%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||||| | |||| ||||||| | || || ||||||| ||||||||| || |||||| Sbjct 4791821 GCTCCATCAAGCTTTCGCCCATTGCGAAAAATACCCCACTACTGCCTCCCCTAAGAGTCT 4791762 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||| ||||||| | ||| | | | |||||| || |||| |||| ||| Sbjct 4791761 GGGCCGTGTCTTAGTCCCAGTTTGGTCAATTATCCTCTCGAACCAACTACTGATCATCGC 4791702 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 |||||| |||||| ||||||||||| |||||| Sbjct 4791701 CTTGGTAAGCTATTGCCTCACCAACTAGCTAATC 4791668 Score = 116 bits (128), Expect = 7e-24 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 15 AGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 74 ||| |||| |||||| | || || |||||| ||||||||| ||||| | |||| |||| Sbjct 28621228 AGGCTTTCGTCCATTGCGAAAAATTTCCCACTACTGCCTCCCATAGGATTTTGGGTCGTG 28621287 Query 75 TCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGG 134 | | |||||||||||||| | ||| |||| | | || |||| ||| ||| ||| | Sbjct 28621288 TATTAGTCCCAATGTGGCTGGTCATCCTCGCTGACCAACTACTAATCATCGCCTTCATAA 28621347 Query 135 GCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCG 183 || ||| ||||||||||| |||||| | ||| ||||| || | |||| Sbjct 28621348 GCCATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCTCCTCAAGCG 28621396 Score = 73.4 bits (80), Expect = 8e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 53 TCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTC 105 ||||||||||||||||||| |||||||||||||||||| | | ||| |||||| Sbjct 56429230 TCCCGTAGGAGTCTGGGCCATGTCTCAGTCCCAATGTGACTGATCATCCTCTC 56429282 >seq3 Length=45765648 Score = 136 bits (150), Expect = 8e-30 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| ||| ||| ||| || |||||| || || | ||| ||||||||||| ||||||||| Sbjct 44074844 GCTCCATTAGGCTTTTTCCAATTGTGGAAAATTCTCCATTGCTGCCTCCCATAGGAGTCT 44074903 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| ||||||||||||||| |||| | | ||| | | || || ||||| |||| ||| Sbjct 44074904 GGGTCGTGTCTCAGTCCCAGTGTGACTGATCATCATTTCGAACCAGCTACTGATCATCGC 44074963 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCC 171 |||||| ||||| |||||||||||| |||||| | | | |||| Sbjct 44074964 CTTGGTAAACTATTGTCTCACCAACTAGCTAATCAGACACAAGCC 44075008 >seq4 Length=62178258 Score = 107 bits (118), Expect = 4e-21 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 || |||| ||||||||| || || ||| ||| |||||||||||| ||||| | || ||| Sbjct 46209978 GGCTTTCACCCATTGTGGAAAATTCCCTACTCTTGCCTCCCGTAGAAGTCTAGACCATGT 46209919 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135 || ||||| | |||| | ||| ||||| | || ||||| ||| ||| ||||| | Sbjct 46209918 CTTAGTCCTAGCGTGGTTGATCATCCTCTTGGACCAGCTACTAATCATCGCATTGGTAAG 46209859 Query 136 CTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGA 184 |||||| |||| |||||| |||| | ||| | ||| || || | ||| Sbjct 46209858 CTATTACCTCATCAACTAGATAATTAGACGCAAACCCCTCCTTGAACGA 46209810 Score = 95.1 bits (104), Expect = 2e-17 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 19 TTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTC 78 |||| || ||||| || || ||||||| ||||||| ||||||||||||| || ||||| Sbjct 25536751 TTTCGCCTATTGTAGAAAATTCCCCACTATTGCCTCCAGTAGGAGTCTGGGACGCGTCTC 25536692 Query 79 AGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTG 130 ||||||| |||||| | ||| ||||| | | ||||| ||| ||| |||| Sbjct 25536691 AGTCCCAGTGTGGCTGATCATCCTCTTGGACTAGCTACTAATCATCGCCTTG 25536640 >seq7 Length=60982465 Score = 105 bits (116), Expect = 1e-20 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || || |||||||||| |||| |||||| Sbjct 59792609 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCTCACTGCTGCCCACCGTGGGAGTCC 59792550 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 | | |||||| ||||||| ||||| | ||| || || || |||| ||| | || Sbjct 59792549 GAGTTGTGTCTTAGTCCCAGCGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 59792490 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 59792489 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 59792457 Score = 98.7 bits (108), Expect = 2e-18 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 16 GGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 || |||| |||||||| ||| || ||||||||||||| | || |||||| ||| ||||| Sbjct 59743280 GGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCATGTGGGAGTCCGGGTCGTGT 59743339 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135 |||||||||| ||| || ||| | || || |||| ||| | |||||||| | Sbjct 59743340 CTCAGTCCCACTGTAGCTAATCATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAG 59743399 Query 136 CTATTATCTCACCAACTACCTAAT 159 | ||| || ||| |||||||||| Sbjct 59743400 CCTTTACCTAACCGACTACCTAAT 59743423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998389676544