Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq1034 232 2e-58
seq7 179 9e-43
seq13 163 7e-38
seq6 152 1e-34
seq4 141 2e-31
seq2 140 8e-31
seq11 138 3e-30
seq10 138 3e-30
seq5 134 3e-29
seq8 132 1e-28
seq3 129 1e-27
>seq1034
Length=160161
Score = 232 bits (256), Expect = 2e-58
Identities = 302/409 (74%), Gaps = 18/409 (4%)
Strand=Plus/Minus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | |
Sbjct 110889 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 110830
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||||| | |||| | | |||||| |||| | || |||||| |||
Sbjct 110829 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 110770
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
||||||| || ||| || || | || | |||| ||| ||||| || || | |
Sbjct 110769 ACATTCTCGCTTCCGCTTCGTCTACTCC---CGCTCACGCGGGTGCTTCCCC-CTAAGGC 110714
Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231
| ||||||||||||| | || ||| | ||||||||||||| ||| |||| |
Sbjct 110713 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 110658
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| | ||| ||||||| | | || || |||||||||||||||||||||||||||
Sbjct 110657 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 110599
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||
Sbjct 110598 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 110539
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 110538 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 110490
Score = 232 bits (256), Expect = 2e-58
Identities = 302/409 (74%), Gaps = 18/409 (4%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | |
Sbjct 137927 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 137986
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||||| | |||| | | |||||| |||| | || |||||| |||
Sbjct 137987 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 138046
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
||||||| || ||| || || | || | |||| ||| ||||| || || | |
Sbjct 138047 ACATTCTCGCTTCCGCTTCGTCTACTCC---CGCTCACGCGGGTGCTTCCCC-CTAAGGC 138102
Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231
| ||||||||||||| | || ||| | ||||||||||||| ||| |||| |
Sbjct 138103 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 138158
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||||| | ||| ||||||| | | || || |||||||||||||||||||||||||||
Sbjct 138159 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 138217
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| | || |||||||||| ||||| ||| | | || |||||| |||||
Sbjct 138218 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 138277
Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| || |||||||||||||||| ||||| |||||||||||||||||
Sbjct 138278 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 138326
>seq7
Length=60982465
Score = 179 bits (198), Expect = 9e-43
Identities = 288/407 (71%), Gaps = 15/407 (4%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| | || ||| | |
Sbjct 39399497 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGATGAACCTTGCG 39399556
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
|||| |||||| | |||| | | |||||| ||| | || |||| | |||
Sbjct 39399557 GAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTTACCAATGTTTGCGTTACTTAAGCCG 39399616
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
||||||| || ||| | || | || | |||| ||| ||||| || | |
Sbjct 39399617 ACATTCTCGCTTCCGCTTTGTCTACTCC---CGCTCACACGGGTGCTTCCCCTAAGGCGG 39399673
Query 178 GACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233
||||||||||||| | || ||| | ||||||||||||| ||| |||| |||
Sbjct 39399674 AACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GCC 39399729
Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293
||| | ||| | ||||| | | || || || |||||||||||||||||||||||||
Sbjct 39399730 CCGTT-CATCTTTGGCGCAAGAGCGCTCGATCAATGAGCTATTACGCACTCTTTCAAGGG 39399788
Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353
|||||||||| | || ||||||||| ||||| ||| | | | |||||| |||||||
Sbjct 39399789 TGGCTGCTTCTAGGCAAACCTCCTGACTGTCTTTGCACCCCTATCTCCTTTATCACTGAG 39399848
Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| |||||||||||| ||| ||||| ||| |||||||||||||
Sbjct 39399849 CGGTCATTTAGGGGCCTTATCTGGTGATCCGGGTTGTTTCCCTCTCG 39399895
Score = 80.6 bits (88), Expect = 6e-13
Identities = 134/191 (70%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 209 ACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGT 268
||||||| ||| ||| |||| ||| || | ||| | || | ||| || | |||
Sbjct 42174969 ACAGCTTTGGCAGATTGCTTA-GCCTCGTT-CATATTTGGTGTAAGATCGCTCAATTAGT 42175026
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
|||||| |||| |||||||||||| |||||| ||| | | |||||| ||| | |||
Sbjct 42175027 GAGCTACTACGTACTCTTTCAAGGGTGGCTGTTTCTAGGAAAACCTCTTGGCTATCTCTA 42175086
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
|| | || || ||| |||| || | ||| |||||||||||| ||||| | | |
Sbjct 42175087 CACCCTTACCTCATTTATCACTAAGCGGTAATTTATGGGCCTTAGCTGGTGATCCGAGTT 42175146
Query 389 GTTTCCCTCTC 399
||| ||||||
Sbjct 42175147 ATTTACCTCTC 42175157
>seq13
Length=58321163
Score = 163 bits (180), Expect = 7e-38
Identities = 148/184 (80%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 217 GGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATT 276
|| |||| |||| |||||| | ||| ||||||| | | || || ||||||||||||
Sbjct 52638446 GGTGGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATT 52638503
Query 277 ACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCA 336
|||||||||||||||| |||||||||| |||| |||||||||| ||||| ||| | | |
Sbjct 52638504 ACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCAAACCTCCTGGCTGTCTCTGCACCCCTA 52638563
Query 337 CATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396
| |||||| ||||||| || ||||||||||||| || ||||| ||||| |||||||
Sbjct 52638564 CCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGTTGGTGATCCGGGCTATTTCCCT 52638623
Query 397 CTCG 400
||||
Sbjct 52638624 CTCG 52638627
Score = 120 bits (132), Expect = 7e-25
Identities = 144/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
|||||||||| || || |||| |||||| | ||| |||| || | | || | ||
Sbjct 46425462 CCACAGCTTCAGCAAATCGCTTA-GCCCCGTT-CATCTTCGGTGCAAGAGCTCTCAATCA 46425519
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
||||||||||||||||| |||||||| |||||||||| | || |||||||| | |||||
Sbjct 46425520 GTGAGCTATTACGCACTATTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTAGCTGTCTC 46425579
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
||| | | | || ||| || |||| || ||| |||| ||||||| |||| ||
Sbjct 46425580 TGCACCCCTGCCTCTTTTATCATTGAGCGGTCATTTAAGGGCATTAGCTGGTGATTCAGG 46425639
Query 387 CTGTTTCCCTCTC 399
||||||||||||
Sbjct 46425640 TTGTTTCCCTCTC 46425652
>seq6
Length=51074515
Score = 152 bits (168), Expect = 1e-34
Identities = 151/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 208 CACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAG 267
|||| ||||| | ||| |||| ||||| | ||| || |||| | | || | |||
Sbjct 32306192 CACAACTTCGACAGATTGCTTA-GCCCCATT-CATCTTCAGCGCAAGAGCGCTCAATCAG 32306249
Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327
|||||||||||| |||||||||||| ||| |||||| |||| ||||||||||||||||
Sbjct 32306250 TGAGCTATTACGTACTCTTTCAAGGGTGGTTGCTTCTAAGCAAACCTCCTGGTTGTCTCT 32306309
Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387
||| | | || || ||| ||||||| ||||||||||||||| ||| ||||| || |
Sbjct 32306310 GCACCCCTACCTCATTTATCACTGAGCGGTCACTTAGGGGCCTTAACTGGTGATCCGGAC 32306369
Query 388 TGTTTCCCTCTCG 400
|||||||||||||
Sbjct 32306370 TGTTTCCCTCTCG 32306382
Score = 116 bits (128), Expect = 9e-24
Identities = 107/135 (79%), Gaps = 3/135 (2%)
Strand=Plus/Plus
Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325
|||||||||||||||||| || | |||||||||| | || | |||| ||| || ||
Sbjct 48278208 AGTGAGCTATTACGCACTGATTGAG---TGGCTGCTTCTAGGCAATCCTCTTGGCTGCCT 48278264
Query 326 ACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGG 385
|| |||||| |||||| ||||||| | || ||| ||||||||||||||||| |||
Sbjct 48278265 CTCCATCTCCACCTCCTTTATCACTGAGCGATCATTTAAGGGCCTTAGCTGATGATTTGG 48278324
Query 386 GCTGTTTCCCTCTCG 400
| |||||||||||||
Sbjct 48278325 GTTGTTTCCCTCTCG 48278339
Score = 114 bits (126), Expect = 3e-23
Identities = 103/128 (80%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 273 TATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAAC 332
||||||||||||||| |||| |||||||||| | || ||||||||| ||||| ||| |
Sbjct 35927468 TATTACGCACTCTTT-AAGGGTGGCTGCTTCTAGGCAGACCTCCTGGCTGTCTTTGCACC 35927526
Query 333 TCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTT 392
| || |||||| ||||||| || ||||||||||||| || ||||| || |||||
Sbjct 35927527 CCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGTTGGTGATCCAGGTTGTTT 35927586
Query 393 CCCTCTCG 400
||||||||
Sbjct 35927587 CCCTCTCG 35927594
>seq4
Length=62178258
Score = 141 bits (156), Expect = 2e-31
Identities = 168/226 (74%), Gaps = 9/226 (4%)
Strand=Plus/Plus
Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234
||||||||||||| | || ||| | ||||||||||||| ||| ||||| ||
Sbjct 32003598 ACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCACTTAG--CC 32003652
Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294
| | ||| | ||| | | || || ||||||||||||| ||||||||| |||| |
Sbjct 32003653 CTATTCATCTTTGGCACAAGAGTGCTCGATCAGTGAGCTATTATGCACTCTTTTAAGGGT 32003712
Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354
|| |||||| | | | |||||||||||||| ||| | | || || ||| || ||||
Sbjct 32003713 GGTTGCTTCTAGGGAATCCTCCTGGTTGTCTCTGCACCCCTACCTCTTTTATCATTGAGC 32003772
Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
|| |||||||||||||||| ||||| |||||||||||||||||
Sbjct 32003773 GGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 32003818
Score = 75.2 bits (82), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 4/119 (3%)
Strand=Plus/Minus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||| ||||| ||| ||||| |||| | | ||| ||||| | || || ||
Sbjct 37642704 CCACA--TTCGGTAGATCACTTA-GCCCTGTT-CATCTTCGGCACAAAAGTGCTCGATTT 37642649
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325
|||||||||||| ||||||||||||| |||||||||| | | | |||||||||| |||
Sbjct 37642648 GTGAGCTATTACACACTCTTTCAAGGGTGGCTGCTTCTAGGGAATCCTCCTGGTTCTCT 37642590
>seq2
Length=62769430
Score = 140 bits (154), Expect = 8e-31
Identities = 147/192 (77%), Gaps = 6/192 (3%)
Strand=Plus/Minus
Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268
||||||| | || |||| || || | |||||| |||| || ||| || |||||||
Sbjct 25341728 GCTTCGGTGAATCACTTGAGGCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 25341672
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
|||||||||| | | || ||||||||||||||| ||||| |||||||||||||| |
Sbjct 25341671 GAGCTATTACACTTTTTTCAAAGGATGGCTGCTTCTAAGCCCACCTCCTGGTTGTCATTG 25341612
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
| ||| |||||| ||||| ||| | ||||||| |||||| | ||||||||||
Sbjct 25341611 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGAACTTAGCATACGATCTGGGCT 25341552
Query 389 GTTTCCCTCTCG 400
||||||||||||
Sbjct 25341551 GTTTCCCTCTCG 25341540
Score = 122 bits (134), Expect = 2e-25
Identities = 280/411 (68%), Gaps = 22/411 (5%)
Strand=Plus/Minus
Query 2 GACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCC 61
||||| ||| | ||||| |||||| || || |||||| | ||| ||| | ||
Sbjct 40970099 GACTATGCCATTTGGCCTGATCTTAGGCCCTGATTCACCCTCTGTGGACGAACCTTACGG 40970040
Query 62 TGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTG 120
||||||||| | | |||| | | |||||| |||| | || ||| || |||
Sbjct 40970039 AGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACACAAGCCGA 40969980
Query 121 CATTCTCACTC--GCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG 178
|||||| || || || || | || || |||| ||| ||||| || || | ||
Sbjct 40969979 CATTCTTGCTTTTGCTTCGTCTACTCC---CACTCACGCGGGTGCTTCCCC-CTAAGGCG 40969924
Query 179 --ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232
| ||||| ||||| | || ||| | ||||||||| || ||| |||| ||
Sbjct 40969923 GAAAGCTCCGCTACCAATGCATTTTTACA---TCCCACAGCTTTGGTAGATCGCTTA-GC 40969868
Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292
||| | |||| || | || |||| || |||||||||||||| |||| |||||||
Sbjct 40969867 GCCGTT-CATTTTCAGGGCAAGGGCACTCGATCAGTGAGCTATTACATACTCATTCAAGG 40969809
Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352
|||||||||| | || |||| || | ||||| || || | || |||||| |||| |
Sbjct 40969808 GTGGCTGCTTCTAGGCAGACCTTCTAGCTGTCTCTGC-ACCCTACCTCCTTTATCACTAA 40969750
Query 353 GTCACCACTTAGGGGCCTTAGC---TGATGATCTGGGCTGTTTCCCTCTCG 400
| | || ||||||| |||||| |||||||| |||||||||| ||||
Sbjct 40969749 GCGATCATTTAGGGGTCTTAGCTAGTGATGATCCAAGCTGTTTCCCACTCG 40969699
>seq11
Length=62681010
Score = 138 bits (152), Expect = 3e-30
Identities = 150/194 (77%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||||||||| | |||| |||| | |||| | ||| || ||| | | | || || ||
Sbjct 19424561 CCACAGCTTCGACAGATAGCTTA-GTCCCGTT-CATCTTCAGCGTAGGAGCGCTCGATCA 19424504
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
|||||||||||| | |||| |||| ||| |||||| | || ||||||||||||||||
Sbjct 19424503 GTGAGCTATTACTC--TCTTCCAAGAGTGGTTGCTTCTAGGCAAACCTCCTGGTTGTCTC 19424446
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
| | || || || ||| ||||||||| || ||||||||||||| || |||| ||||
Sbjct 19424445 TGGACCTT-ACCTCATTTACCACTGAGTGGTCATTTAGGGGCCTTAGTTGGTGATTTGGG 19424387
Query 387 CTGTTTCCCTCTCG 400
|||||||||||||
Sbjct 19424386 TTGTTTCCCTCTCG 19424373
Score = 111 bits (122), Expect = 4e-22
Identities = 103/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
||| |||||||| ||||||||||| ||||| |||| | | |||||||| | ||||| |
Sbjct 3680641 GAGTTATTACGCGCTCTTTCAAGGGTGGCTACTTCTAGACAAACCTCCTAGCTGTCTCTG 3680700
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
|| | | || |||||| || |||| || |||||||||||||||| | |||||| |
Sbjct 3680701 CACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGCCTTAGCTGGTCGTCTGGGTT 3680760
Query 389 GTTTCCCTCTC 399
|||||||||||
Sbjct 3680761 GTTTCCCTCTC 3680771
Score = 111 bits (122), Expect = 4e-22
Identities = 140/190 (74%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 209 ACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGT 268
||||||||| | || ||| |||||| | ||| ||||||| | | || || ||||
Sbjct 3856409 ACAGCTTCGACAAATCGTTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGT 3856466
Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328
|| |||||| ||||||||||||| ||| |||||| | || ||||| |||| |||||
Sbjct 3856467 GAACTATTATACACTCTTTCAAGGTTGGTTGCTTCTAGGCAAACCTTCTGGCTGTCTCTA 3856526
Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388
|| | | || |||||| ||| || || ||||||||||||| || | || |||| |
Sbjct 3856527 CACCCCTACCTCCTTTATGACTAAGCGGTCATTTAGGGGCCTTAGTTGGTAATTTGGGTT 3856586
Query 389 GTTTCCCTCT 398
|||||||||
Sbjct 3856587 TTTTCCCTCT 3856596
>seq10
Length=62175169
Score = 138 bits (152), Expect = 3e-30
Identities = 253/362 (70%), Gaps = 18/362 (5%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| | ||||| |||||| | ||||||||| | || ||| | |
Sbjct 41180739 CGACTACGCCTTTTGGCCTGATCTTAGGCCTTGACTCACCCTCCGTGGATGAACCTTGCG 41180798
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119
||||||||||| | |||| | | |||||| |||| | || || ||| |||
Sbjct 41180799 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTATTCAAGCCG 41180858
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177
||||||| || ||| ||| || | || | |||| ||| ||||| || || | |
Sbjct 41180859 ACATTCTCGCTTTCGCTTCATCTACTCC---CGCTCACGCGGGTGCTTC-CCTCTAAGGC 41180914
Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231
| ||||||||||||| | || ||| | | |||||||| || ||| |||| |
Sbjct 41180915 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCTACAGCTTCAGCAGATCGCTTA-G 41180970
Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291
||| | | ||| ||||||| | | || || |||||||||||||||||||||||||||
Sbjct 41180971 CCCTGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 41181029
Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351
| |||||||||| | || |||||| ||| || || ||| | | || |||||| || ||
Sbjct 41181030 GGTGGCTGCTTCTAGGCAAACCTCTTGGCTGACTCTGCACCCCTACCTCCTTTATCATTG 41181089
Query 352 AG 353
||
Sbjct 41181090 AG 41181091
>seq5
Length=64140413
Score = 134 bits (148), Expect = 3e-29
Identities = 113/139 (81%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321
|| ||||||||||||||||||||||||||| |||||||||| | | |||||| ||| |
Sbjct 49867074 GATCAGTGAGCTATTACGCACTCTTTCAAGAGTGGCTGCTTCTAGGAAAACCTCTTGGCT 49867133
Query 322 GTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381
| || ||| | | || |||||| |||||||| | || | |||||||||||||| ||||
Sbjct 49867134 GCCTCTGCACCCCTACCTCCTTTATCACTGAGTGATCATTCAGGGGCCTTAGCTGGTGAT 49867193
Query 382 CTGGGCTGTTTCCCTCTCG 400
||||||||| || |||||
Sbjct 49867194 TTGGGCTGTTACCTTCTCG 49867212
Score = 125 bits (138), Expect = 2e-26
Identities = 113/142 (80%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318
|| || ||||||||||||| ||| |||||||||| ||||| |||| | || |||||||||
Sbjct 56741909 CTCGATCAGTGAGCTATTATGCATTCTTTCAAGGGTGGCTACTTCTAGGCAAACCTCCTG 56741968
Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378
|||||| | | | | || |||||| || |||| || ||||||| |||||||| |
Sbjct 56741969 ATTGTCTCTGTACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGACTTAGCTGGT 56742028
Query 379 GATCTGGGCTGTTTCCCTCTCG 400
|||| | |||||||||||||||
Sbjct 56742029 GATCCGAGCTGTTTCCCTCTCG 56742050
Score = 122 bits (134), Expect = 2e-25
Identities = 276/407 (68%), Gaps = 16/407 (4%)
Strand=Plus/Plus
Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60
||||||||||| ||||||| |||||| || ||||||||| |||||||| |
Sbjct 49305706 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCTATAGACAAACCTTGTG 49305765
Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACAC-GCTACTCATGCCT 119
||||||||||| | | | | | | |||| |||| | | |||||| |||
Sbjct 49305766 GAGGAACCCTTGGGTTTTTAGGGAATTGTATTCTCACCAATGTTTGTGTTACTCAAGCCG 49305825
Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTT-CACCACTGACA 176
|||||||| || ||| || || || || | || | | |||| | || | |
Sbjct 49305826 GCATTCTCGCTTCCGCTTCGTCTATTCC---CACTAACGCAGGTGCTTTCCCCTAAGGTA 49305882
Query 177 CGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232
||||||||||||| | || ||| | ||||||||| | ||| ||| ||
Sbjct 49305883 GAACGCTCCCCTACCGATACATTTTTACATCT---CACAGCTTCAGTAGATCGGTTA-GC 49305938
Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292
|||| | ||| ||||||| | |||| | || |||||||| ||||||||||||||
Sbjct 49305939 CCCGTT-CATCTTCGGCGCAAGAGCACTCAATCAAAAAGCTATTATGCACTCTTTCAAGG 49305997
Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352
|||||||||| | | |||||| | ||||||| || | | || || ||| |||| |
Sbjct 49305998 GTGGCTGCTTCTAGACAAACCTCATTGTTGTCTCTACACCCCTACCTCTTTTATCACTTA 49306057
Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399
| | | ||||||||||||| || | || | || ||||||||||||
Sbjct 49306058 GCGATTATTTAGGGGCCTTAGTTGGTAATTTAGGTTGTTTCCCTCTC 49306104
>seq8
Length=57128820
Score = 132 bits (146), Expect = 1e-28
Identities = 146/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
||||||||||| | ||| |||| |||| | | ||| ||||||| | | ||||| |
Sbjct 28323020 CCACAGCTTCGTCAGATCGCTTA-GCCCAGTT-CATCTTCGGCGCAAGAGCGCTTGATTA 28323077
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
|||||||||||||| |||||||||| ||| ||||| | || ||||| |||| |||||
Sbjct 28323078 GTGAGCTATTACGCCTTCTTTCAAGGGTGGTTGCTTTTAGGCAAACCTTCTGGCTGTCTT 28323137
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
||| | | || || || ||||||| ||| ||||| ||||||||| ||||| ||
Sbjct 28323138 TGCACCCCTACCTCTTTCGTCACTGAGCAGCCATTTAGGAGCCTTAGCTAGTGATCCAGG 28323197
Query 387 CTGTTTCCCTCT 398
||||||||||||
Sbjct 28323198 CTGTTTCCCTCT 28323209
Score = 105 bits (116), Expect = 2e-20
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304
||||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||
Sbjct 34512864 TCGGCGCAAGAGCACTTGATCAATGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCT 34512923
Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364
| || |||||||||| | ||| ||| | || | ||| || ||| || ||||
Sbjct 34512924 AGGCAAACCTCCTGGCTATCTCTGCACCCATACCTTATTTATCATTGAACGGTCATTTAG 34512983
Query 365 GGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400
| ||||||||| ||||| |||| ||| || |||
Sbjct 34512984 GCACCTTAGCTGGTGATCCAGGCTATTTTTCTTTCG 34513019
>seq3
Length=45765648
Score = 129 bits (142), Expect = 1e-27
Identities = 146/193 (76%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266
|||||||||||| ||| ||||| ||||| | | | | || || | |||| || |
Sbjct 13880021 CCACAGCTTCGGTAGATCACTTA-GCCCCATT-CTTCTTTGGTGCAAGAGCACTCGATTA 13879964
Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326
||||| ||||| ||| |||||||| | ||| | |||| | | ||||||||||||||||
Sbjct 13879963 GTGAGTTATTATGCATTCTTTCAATGGTGGTTTCTTCTAGGAAAACCTCCTGGTTGTCTT 13879904
Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386
||| | | || ||||| |||| || | || |||||||||||||||| |||||||||
Sbjct 13879903 TGCACCCCTACCACCTTTATCACTAAGCCGTCATTTAGGGGCCTTAGCTGGTGATCTGGG 13879844
Query 387 CTGTTTCCCTCTC 399
|| ||||||| ||
Sbjct 13879843 CTATTTCCCTTTC 13879831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177587823616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |