Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1034 232 2e-58 seq7 179 9e-43 seq13 163 7e-38 seq6 152 1e-34 seq4 141 2e-31 seq2 140 8e-31 seq11 138 3e-30 seq10 138 3e-30 seq5 134 3e-29 seq8 132 1e-28 seq3 129 1e-27 >seq1034 Length=160161 Score = 232 bits (256), Expect = 2e-58 Identities = 302/409 (74%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 110889 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 110830 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||||| | |||| | | |||||| |||| | || |||||| ||| Sbjct 110829 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 110770 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || || | || | |||| ||| ||||| || || | | Sbjct 110769 ACATTCTCGCTTCCGCTTCGTCTACTCC---CGCTCACGCGGGTGCTTCCCC-CTAAGGC 110714 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 110713 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 110658 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 110657 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 110599 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 110598 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 110539 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 110538 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 110490 Score = 232 bits (256), Expect = 2e-58 Identities = 302/409 (74%), Gaps = 18/409 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 137927 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 137986 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||||| | |||| | | |||||| |||| | || |||||| ||| Sbjct 137987 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 138046 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || || | || | |||| ||| ||||| || || | | Sbjct 138047 ACATTCTCGCTTCCGCTTCGTCTACTCC---CGCTCACGCGGGTGCTTCCCC-CTAAGGC 138102 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 138103 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 138158 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 138159 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 138217 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 138218 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 138277 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 138278 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 138326 >seq7 Length=60982465 Score = 179 bits (198), Expect = 9e-43 Identities = 288/407 (71%), Gaps = 15/407 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | || ||| | | Sbjct 39399497 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGATGAACCTTGCG 39399556 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 |||| |||||| | |||| | | |||||| ||| | || |||| | ||| Sbjct 39399557 GAGGAAACCTTGGGTTTTCGGGGCATTGGATTCTTACCAATGTTTGCGTTACTTAAGCCG 39399616 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| | || | || | |||| ||| ||||| || | | Sbjct 39399617 ACATTCTCGCTTCCGCTTTGTCTACTCC---CGCTCACACGGGTGCTTCCCCTAAGGCGG 39399673 Query 178 GACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||||||||| | || ||| | ||||||||||||| ||| |||| ||| Sbjct 39399674 AACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-GCC 39399729 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| | ||| | ||||| | | || || || ||||||||||||||||||||||||| Sbjct 39399730 CCGTT-CATCTTTGGCGCAAGAGCGCTCGATCAATGAGCTATTACGCACTCTTTCAAGGG 39399788 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| | || ||||||||| ||||| ||| | | | |||||| ||||||| Sbjct 39399789 TGGCTGCTTCTAGGCAAACCTCCTGACTGTCTTTGCACCCCTATCTCCTTTATCACTGAG 39399848 Query 354 TCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||||||||||| ||| ||||| ||| ||||||||||||| Sbjct 39399849 CGGTCATTTAGGGGCCTTATCTGGTGATCCGGGTTGTTTCCCTCTCG 39399895 Score = 80.6 bits (88), Expect = 6e-13 Identities = 134/191 (70%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 209 ACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGT 268 ||||||| ||| ||| |||| ||| || | ||| | || | ||| || | ||| Sbjct 42174969 ACAGCTTTGGCAGATTGCTTA-GCCTCGTT-CATATTTGGTGTAAGATCGCTCAATTAGT 42175026 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||| |||| |||||||||||| |||||| ||| | | |||||| ||| | ||| Sbjct 42175027 GAGCTACTACGTACTCTTTCAAGGGTGGCTGTTTCTAGGAAAACCTCTTGGCTATCTCTA 42175086 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 || | || || ||| |||| || | ||| |||||||||||| ||||| | | | Sbjct 42175087 CACCCTTACCTCATTTATCACTAAGCGGTAATTTATGGGCCTTAGCTGGTGATCCGAGTT 42175146 Query 389 GTTTCCCTCTC 399 ||| |||||| Sbjct 42175147 ATTTACCTCTC 42175157 >seq13 Length=58321163 Score = 163 bits (180), Expect = 7e-38 Identities = 148/184 (80%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 217 GGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATT 276 || |||| |||| |||||| | ||| ||||||| | | || || |||||||||||| Sbjct 52638446 GGTGGATCGCTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATT 52638503 Query 277 ACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCA 336 |||||||||||||||| |||||||||| |||| |||||||||| ||||| ||| | | | Sbjct 52638504 ACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCAAACCTCCTGGCTGTCTCTGCACCCCTA 52638563 Query 337 CATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | |||||| ||||||| || ||||||||||||| || ||||| ||||| ||||||| Sbjct 52638564 CCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGTTGGTGATCCGGGCTATTTCCCT 52638623 Query 397 CTCG 400 |||| Sbjct 52638624 CTCG 52638627 Score = 120 bits (132), Expect = 7e-25 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||||||| || || |||| |||||| | ||| |||| || | | || | || Sbjct 46425462 CCACAGCTTCAGCAAATCGCTTA-GCCCCGTT-CATCTTCGGTGCAAGAGCTCTCAATCA 46425519 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||||||||||||||| |||||||| |||||||||| | || |||||||| | ||||| Sbjct 46425520 GTGAGCTATTACGCACTATTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTAGCTGTCTC 46425579 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | | || ||| || |||| || ||| |||| ||||||| |||| || Sbjct 46425580 TGCACCCCTGCCTCTTTTATCATTGAGCGGTCATTTAAGGGCATTAGCTGGTGATTCAGG 46425639 Query 387 CTGTTTCCCTCTC 399 |||||||||||| Sbjct 46425640 TTGTTTCCCTCTC 46425652 >seq6 Length=51074515 Score = 152 bits (168), Expect = 1e-34 Identities = 151/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 208 CACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAG 267 |||| ||||| | ||| |||| ||||| | ||| || |||| | | || | ||| Sbjct 32306192 CACAACTTCGACAGATTGCTTA-GCCCCATT-CATCTTCAGCGCAAGAGCGCTCAATCAG 32306249 Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327 |||||||||||| |||||||||||| ||| |||||| |||| |||||||||||||||| Sbjct 32306250 TGAGCTATTACGTACTCTTTCAAGGGTGGTTGCTTCTAAGCAAACCTCCTGGTTGTCTCT 32306309 Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387 ||| | | || || ||| ||||||| ||||||||||||||| ||| ||||| || | Sbjct 32306310 GCACCCCTACCTCATTTATCACTGAGCGGTCACTTAGGGGCCTTAACTGGTGATCCGGAC 32306369 Query 388 TGTTTCCCTCTCG 400 ||||||||||||| Sbjct 32306370 TGTTTCCCTCTCG 32306382 Score = 116 bits (128), Expect = 9e-24 Identities = 107/135 (79%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 266 AGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 |||||||||||||||||| || | |||||||||| | || | |||| ||| || || Sbjct 48278208 AGTGAGCTATTACGCACTGATTGAG---TGGCTGCTTCTAGGCAATCCTCTTGGCTGCCT 48278264 Query 326 ACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGG 385 || |||||| |||||| ||||||| | || ||| ||||||||||||||||| ||| Sbjct 48278265 CTCCATCTCCACCTCCTTTATCACTGAGCGATCATTTAAGGGCCTTAGCTGATGATTTGG 48278324 Query 386 GCTGTTTCCCTCTCG 400 | ||||||||||||| Sbjct 48278325 GTTGTTTCCCTCTCG 48278339 Score = 114 bits (126), Expect = 3e-23 Identities = 103/128 (80%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 273 TATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAAC 332 ||||||||||||||| |||| |||||||||| | || ||||||||| ||||| ||| | Sbjct 35927468 TATTACGCACTCTTT-AAGGGTGGCTGCTTCTAGGCAGACCTCCTGGCTGTCTTTGCACC 35927526 Query 333 TCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTT 392 | || |||||| ||||||| || ||||||||||||| || ||||| || ||||| Sbjct 35927527 CCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGTTGGTGATCCAGGTTGTTT 35927586 Query 393 CCCTCTCG 400 |||||||| Sbjct 35927587 CCCTCTCG 35927594 >seq4 Length=62178258 Score = 141 bits (156), Expect = 2e-31 Identities = 168/226 (74%), Gaps = 9/226 (4%) Strand=Plus/Plus Query 179 ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||||||||| | || ||| | ||||||||||||| ||| ||||| || Sbjct 32003598 ACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCACTTAG--CC 32003652 Query 235 CGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGAT 294 | | ||| | ||| | | || || ||||||||||||| ||||||||| |||| | Sbjct 32003653 CTATTCATCTTTGGCACAAGAGTGCTCGATCAGTGAGCTATTATGCACTCTTTTAAGGGT 32003712 Query 295 GGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGT 354 || |||||| | | | |||||||||||||| ||| | | || || ||| || |||| Sbjct 32003713 GGTTGCTTCTAGGGAATCCTCCTGGTTGTCTCTGCACCCCTACCTCTTTTATCATTGAGC 32003772 Query 355 CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 32003773 GGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 32003818 Score = 75.2 bits (82), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||| ||||| ||| ||||| |||| | | ||| ||||| | || || || Sbjct 37642704 CCACA--TTCGGTAGATCACTTA-GCCCTGTT-CATCTTCGGCACAAAAGTGCTCGATTT 37642649 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 |||||||||||| ||||||||||||| |||||||||| | | | |||||||||| ||| Sbjct 37642648 GTGAGCTATTACACACTCTTTCAAGGGTGGCTGCTTCTAGGGAATCCTCCTGGTTCTCT 37642590 >seq2 Length=62769430 Score = 140 bits (154), Expect = 8e-31 Identities = 147/192 (77%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| || || | |||||| |||| || ||| || ||||||| Sbjct 25341728 GCTTCGGTGAATCACTTGAGGCCTGATACATTTTCGGTGCCATGGAG---CTAGACCAGT 25341672 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||| | | || ||||||||||||||| ||||| |||||||||||||| | Sbjct 25341671 GAGCTATTACACTTTTTTCAAAGGATGGCTGCTTCTAAGCCCACCTCCTGGTTGTCATTG 25341612 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| |||||| | |||||||||| Sbjct 25341611 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGAACTTAGCATACGATCTGGGCT 25341552 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 25341551 GTTTCCCTCTCG 25341540 Score = 122 bits (134), Expect = 2e-25 Identities = 280/411 (68%), Gaps = 22/411 (5%) Strand=Plus/Minus Query 2 GACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCC 61 ||||| ||| | ||||| |||||| || || |||||| | ||| ||| | || Sbjct 40970099 GACTATGCCATTTGGCCTGATCTTAGGCCCTGATTCACCCTCTGTGGACGAACCTTACGG 40970040 Query 62 TGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTG 120 ||||||||| | | |||| | | |||||| |||| | || ||| || ||| Sbjct 40970039 AGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACACAAGCCGA 40969980 Query 121 CATTCTCACTC--GCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG 178 |||||| || || || || | || || |||| ||| ||||| || || | || Sbjct 40969979 CATTCTTGCTTTTGCTTCGTCTACTCC---CACTCACGCGGGTGCTTCCCC-CTAAGGCG 40969924 Query 179 --ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 | ||||| ||||| | || ||| | ||||||||| || ||| |||| || Sbjct 40969923 GAAAGCTCCGCTACCAATGCATTTTTACA---TCCCACAGCTTTGGTAGATCGCTTA-GC 40969868 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 ||| | |||| || | || |||| || |||||||||||||| |||| ||||||| Sbjct 40969867 GCCGTT-CATTTTCAGGGCAAGGGCACTCGATCAGTGAGCTATTACATACTCATTCAAGG 40969809 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | || |||| || | ||||| || || | || |||||| |||| | Sbjct 40969808 GTGGCTGCTTCTAGGCAGACCTTCTAGCTGTCTCTGC-ACCCTACCTCCTTTATCACTAA 40969750 Query 353 GTCACCACTTAGGGGCCTTAGC---TGATGATCTGGGCTGTTTCCCTCTCG 400 | | || ||||||| |||||| |||||||| |||||||||| |||| Sbjct 40969749 GCGATCATTTAGGGGTCTTAGCTAGTGATGATCCAAGCTGTTTCCCACTCG 40969699 >seq11 Length=62681010 Score = 138 bits (152), Expect = 3e-30 Identities = 150/194 (77%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||| | |||| |||| | |||| | ||| || ||| | | | || || || Sbjct 19424561 CCACAGCTTCGACAGATAGCTTA-GTCCCGTT-CATCTTCAGCGTAGGAGCGCTCGATCA 19424504 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||| | |||| |||| ||| |||||| | || |||||||||||||||| Sbjct 19424503 GTGAGCTATTACTC--TCTTCCAAGAGTGGTTGCTTCTAGGCAAACCTCCTGGTTGTCTC 19424446 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 | | || || || ||| ||||||||| || ||||||||||||| || |||| |||| Sbjct 19424445 TGGACCTT-ACCTCATTTACCACTGAGTGGTCATTTAGGGGCCTTAGTTGGTGATTTGGG 19424387 Query 387 CTGTTTCCCTCTCG 400 ||||||||||||| Sbjct 19424386 TTGTTTCCCTCTCG 19424373 Score = 111 bits (122), Expect = 4e-22 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 ||| |||||||| ||||||||||| ||||| |||| | | |||||||| | ||||| | Sbjct 3680641 GAGTTATTACGCGCTCTTTCAAGGGTGGCTACTTCTAGACAAACCTCCTAGCTGTCTCTG 3680700 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 || | | || |||||| || |||| || |||||||||||||||| | |||||| | Sbjct 3680701 CACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGCCTTAGCTGGTCGTCTGGGTT 3680760 Query 389 GTTTCCCTCTC 399 ||||||||||| Sbjct 3680761 GTTTCCCTCTC 3680771 Score = 111 bits (122), Expect = 4e-22 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 209 ACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGT 268 ||||||||| | || ||| |||||| | ||| ||||||| | | || || |||| Sbjct 3856409 ACAGCTTCGACAAATCGTTTA-GCCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGT 3856466 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 || |||||| ||||||||||||| ||| |||||| | || ||||| |||| ||||| Sbjct 3856467 GAACTATTATACACTCTTTCAAGGTTGGTTGCTTCTAGGCAAACCTTCTGGCTGTCTCTA 3856526 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 || | | || |||||| ||| || || ||||||||||||| || | || |||| | Sbjct 3856527 CACCCCTACCTCCTTTATGACTAAGCGGTCATTTAGGGGCCTTAGTTGGTAATTTGGGTT 3856586 Query 389 GTTTCCCTCT 398 ||||||||| Sbjct 3856587 TTTTCCCTCT 3856596 >seq10 Length=62175169 Score = 138 bits (152), Expect = 3e-30 Identities = 253/362 (70%), Gaps = 18/362 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| | ||||| |||||| | ||||||||| | || ||| | | Sbjct 41180739 CGACTACGCCTTTTGGCCTGATCTTAGGCCTTGACTCACCCTCCGTGGATGAACCTTGCG 41180798 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||||| | |||| | | |||||| |||| | || || ||| ||| Sbjct 41180799 GAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTATTCAAGCCG 41180858 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| ||| || | || | |||| ||| ||||| || || | | Sbjct 41180859 ACATTCTCGCTTTCGCTTCATCTACTCC---CGCTCACGCGGGTGCTTC-CCTCTAAGGC 41180914 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | | |||||||| || ||| |||| | Sbjct 41180915 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCTACAGCTTCAGCAGATCGCTTA-G 41180970 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||| | | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 41180971 CCCTGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 41181029 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||| ||| || || ||| | | || |||||| || || Sbjct 41181030 GGTGGCTGCTTCTAGGCAAACCTCTTGGCTGACTCTGCACCCCTACCTCCTTTATCATTG 41181089 Query 352 AG 353 || Sbjct 41181090 AG 41181091 >seq5 Length=64140413 Score = 134 bits (148), Expect = 3e-29 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 262 GACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTT 321 || ||||||||||||||||||||||||||| |||||||||| | | |||||| ||| | Sbjct 49867074 GATCAGTGAGCTATTACGCACTCTTTCAAGAGTGGCTGCTTCTAGGAAAACCTCTTGGCT 49867133 Query 322 GTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGAT 381 | || ||| | | || |||||| |||||||| | || | |||||||||||||| |||| Sbjct 49867134 GCCTCTGCACCCCTACCTCCTTTATCACTGAGTGATCATTCAGGGGCCTTAGCTGGTGAT 49867193 Query 382 CTGGGCTGTTTCCCTCTCG 400 ||||||||| || ||||| Sbjct 49867194 TTGGGCTGTTACCTTCTCG 49867212 Score = 125 bits (138), Expect = 2e-26 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || ||||||||||||| ||| |||||||||| ||||| |||| | || ||||||||| Sbjct 56741909 CTCGATCAGTGAGCTATTATGCATTCTTTCAAGGGTGGCTACTTCTAGGCAAACCTCCTG 56741968 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 |||||| | | | | || |||||| || |||| || ||||||| |||||||| | Sbjct 56741969 ATTGTCTCTGTACCCCTACCTCCTTTATCATTGAGCGGTCATTTAGGGGACTTAGCTGGT 56742028 Query 379 GATCTGGGCTGTTTCCCTCTCG 400 |||| | ||||||||||||||| Sbjct 56742029 GATCCGAGCTGTTTCCCTCTCG 56742050 Score = 122 bits (134), Expect = 2e-25 Identities = 276/407 (68%), Gaps = 16/407 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| |||||||| | Sbjct 49305706 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCTATAGACAAACCTTGTG 49305765 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACAC-GCTACTCATGCCT 119 ||||||||||| | | | | | | |||| |||| | | |||||| ||| Sbjct 49305766 GAGGAACCCTTGGGTTTTTAGGGAATTGTATTCTCACCAATGTTTGTGTTACTCAAGCCG 49305825 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTT-CACCACTGACA 176 |||||||| || ||| || || || || | || | | |||| | || | | Sbjct 49305826 GCATTCTCGCTTCCGCTTCGTCTATTCC---CACTAACGCAGGTGCTTTCCCCTAAGGTA 49305882 Query 177 CGACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAGC 232 ||||||||||||| | || ||| | ||||||||| | ||| ||| || Sbjct 49305883 GAACGCTCCCCTACCGATACATTTTTACATCT---CACAGCTTCAGTAGATCGGTTA-GC 49305938 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| | ||| ||||||| | |||| | || |||||||| |||||||||||||| Sbjct 49305939 CCCGTT-CATCTTCGGCGCAAGAGCACTCAATCAAAAAGCTATTATGCACTCTTTCAAGG 49305997 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 |||||||||| | | |||||| | ||||||| || | | || || ||| |||| | Sbjct 49305998 GTGGCTGCTTCTAGACAAACCTCATTGTTGTCTCTACACCCCTACCTCTTTTATCACTTA 49306057 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 | | | ||||||||||||| || | || | || |||||||||||| Sbjct 49306058 GCGATTATTTAGGGGCCTTAGTTGGTAATTTAGGTTGTTTCCCTCTC 49306104 >seq8 Length=57128820 Score = 132 bits (146), Expect = 1e-28 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||| | ||| |||| |||| | | ||| ||||||| | | ||||| | Sbjct 28323020 CCACAGCTTCGTCAGATCGCTTA-GCCCAGTT-CATCTTCGGCGCAAGAGCGCTTGATTA 28323077 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||| |||||||||| ||| ||||| | || ||||| |||| ||||| Sbjct 28323078 GTGAGCTATTACGCCTTCTTTCAAGGGTGGTTGCTTTTAGGCAAACCTTCTGGCTGTCTT 28323137 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || || || ||||||| ||| ||||| ||||||||| ||||| || Sbjct 28323138 TGCACCCCTACCTCTTTCGTCACTGAGCAGCCATTTAGGAGCCTTAGCTAGTGATCCAGG 28323197 Query 387 CTGTTTCCCTCT 398 |||||||||||| Sbjct 28323198 CTGTTTCCCTCT 28323209 Score = 105 bits (116), Expect = 2e-20 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304 ||||||| | ||||||| || ||||||||||||||||||||||||| |||||||||| Sbjct 34512864 TCGGCGCAAGAGCACTTGATCAATGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCT 34512923 Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAG 364 | || |||||||||| | ||| ||| | || | ||| || ||| || |||| Sbjct 34512924 AGGCAAACCTCCTGGCTATCTCTGCACCCATACCTTATTTATCATTGAACGGTCATTTAG 34512983 Query 365 GGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | ||||||||| ||||| |||| ||| || ||| Sbjct 34512984 GCACCTTAGCTGGTGATCCAGGCTATTTTTCTTTCG 34513019 >seq3 Length=45765648 Score = 129 bits (142), Expect = 1e-27 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||||||||| ||| ||||| ||||| | | | | || || | |||| || | Sbjct 13880021 CCACAGCTTCGGTAGATCACTTA-GCCCCATT-CTTCTTTGGTGCAAGAGCACTCGATTA 13879964 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||| ||||| ||| |||||||| | ||| | |||| | | |||||||||||||||| Sbjct 13879963 GTGAGTTATTATGCATTCTTTCAATGGTGGTTTCTTCTAGGAAAACCTCCTGGTTGTCTT 13879904 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | | || ||||| |||| || | || |||||||||||||||| ||||||||| Sbjct 13879903 TGCACCCCTACCACCTTTATCACTAAGCCGTCATTTAGGGGCCTTAGCTGGTGATCTGGG 13879844 Query 387 CTGTTTCCCTCTC 399 || ||||||| || Sbjct 13879843 CTATTTCCCTTTC 13879831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177587823616