Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq1034 163 5e-38
seq8 122 1e-25
seq7 120 5e-25
seq4 113 7e-23
seq12 105 1e-20
seq5 104 4e-20
seq2 104 4e-20
seq13 93.3 7e-17
seq11 93.3 7e-17
seq6 84.2 4e-14
>seq1034
Length=160161
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 106291 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 106232
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 106231 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 106172
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 106171 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 106112
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 106111 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 106052
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 106051 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 106007
Score = 163 bits (180), Expect = 5e-38
Identities = 207/285 (73%), Gaps = 0/285 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 142525 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 142584
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || |||||||||||||||||| ||| | |||||| |||| || | | |||| ||
Sbjct 142585 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 142644
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | ||||||||||| | ||| || | |||||
Sbjct 142645 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 142704
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||
Sbjct 142705 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTA 142764
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 142765 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 142809
>seq8
Length=57128820
Score = 122 bits (134), Expect = 1e-25
Identities = 198/285 (69%), Gaps = 4/285 (1%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| ||||| | | |||||| || ||| || |||||||||
Sbjct 5977416 GCTTTCGTCTCTCAGTATCAGTGTCGGCCCAGCAGAGTGCTTTCACCGTTGGTGTTCCG- 5977358
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
|| ||||||||| |||||| | ||| | |||||| |||| || | | |||| ||
Sbjct 5977357 ---ATCTCTACGCATATCACCGTTCCACTGGAAATTCCCTCTGCCCCTACCGTACTCCAG 5977301
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
|||||| | || | |||||||||| | ||| || | |||||
Sbjct 5977300 CTTGGTAGTTTCCACCGCCTGTCCAAGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAA 5977241
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| | || | | |||||| ||||| |||||||||||||||||| ||| ||||||
Sbjct 5977240 AGCCACTTATAGACGCTTTACGTCCAATCAATCCGGATAACGCTTGCATCCTCTGTATTA 5977181
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||| ||||||||| |||||||| ||| ||
Sbjct 5977180 CCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCGCCAGATA 5977136
>seq7
Length=60982465
Score = 120 bits (132), Expect = 5e-25
Identities = 189/271 (70%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||||| || ||| | | ||||| || ||||||| |||||||| | | || ||||
Sbjct 29984851 CTCAGTGTTAGTGTCGGCTCAGCAGAGTGCTTTCGCCATTGGTGTTCTTTCCGATCTCTA 29984910
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
||||||||||| || ||| |||||| ||| | || | | |||| || ||||
Sbjct 29984911 CGCATTTCACCACTCCACCGAAAATTCCCTTTGGCCCTACCGTACTCTAGCTTGGTAGTT 29984970
Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195
|| | || | || |||||||| | ||| || | ||||| || |||||
Sbjct 29984971 TCCACCGCCTGTCCAGGATTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTAC 29985030
Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255
| | |||||| |||||| | ||| ||||||||||| ||| |||||||||| |||||
Sbjct 29985031 AAACGCTTTACGCCCAATCATTCCAGATAACGCTTGTATCCTCTGTATTACCGCAGCTGC 29985090
Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286
|||||| ||||| ||| ||||||||| ||
Sbjct 29985091 TGGCACAAAGTTAACCGATGCTTATTCCCCA 29985121
Score = 91.5 bits (100), Expect = 2e-16
Identities = 183/270 (68%), Gaps = 6/270 (2%)
Strand=Plus/Minus
Query 17 TCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTAC 76
|||| |||||| | | ||| || || |||||| |||||||| | || | ||
Sbjct 51680420 TCAGTGTCAGTGTCGGCCCAACAGAATGCTTTCGCCGTTGGTGTTCTTTTCGATCTTTAG 51680361
Query 77 GCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTT 136
|||||| | |||| ||| | |||||| |||| || | | |||| || |||||
Sbjct 51680360 GCATTTTATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTAGTTT 51680301
Query 137 CAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCT 193
| | ||| |||| |||||||||| | ||| | ||||| || |||
Sbjct 51680300 CCACTGC---CTATCCAGGGTTGAGCCATGGGATTTGATGGTGGACTTAAAAAGCCACCT 51680244
Query 194 ACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCT 253
||| | |||||| |||||| | || ||| || ||||| | | ||||||||||||||
Sbjct 51680243 ACAGACTCTTTACGCCCAATCATTCTAGATGACACTTGCGTCTTTTGTATTACCGCGGCT 51680184
Query 254 GCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||| |||||||| |||||||||
Sbjct 51680183 GCTGGCACAAAGTTAGCCTATGCTTATTCC 51680154
Score = 73.4 bits (80), Expect = 7e-11
Identities = 76/99 (77%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 189 CGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC--GTATTAC 246
|||||||| ||||||||| |||| | | |||| | ||| |||||| | | || ||||
Sbjct 59743097 CGCCTACATGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCTCCCCCTGTCTTAC 59743156
Query 247 CGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
||| ||||||||||| ||||| || || || ||||||
Sbjct 59743157 TGCGCCTGCTGGCACGGAGTTAACCAAGGTTTCTTCCTC 59743195
>seq4
Length=62178258
Score = 113 bits (124), Expect = 7e-23
Identities = 190/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Minus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||||| || ||| | | |||||| || | |||| |||||||| | | || ||||
Sbjct 25537105 CTCAGTGTTAGTGTCAGCCCAGCAGAGTGCTTCCGCCGTTGGTGTTCTTTCCGATCTCTA 25537046
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
||||||| ||| || ||| | |||||| |||| || | | |||| || ||||
Sbjct 25537045 CGCATTTGACCACTCCACCAGAAATTCCTTCTGCCCCTACTGTACTCCAGCTTGGTAGTT 25536986
Query 136 TCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTAC 195
|| | || || ||||||||||| | ||| || ||||| | || ||| |
Sbjct 25536985 TCCACCGCCTGCCTAGGGTTGAGCCCTGGGATTTGACGGTGGACTTAAAATGCCACCTTC 25536926
Query 196 ACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGC 255
| ||||||||| ||| | ||| |||||||||||| ||| ||||||| || || |
Sbjct 25536925 AGATGCTTTACACCTAATCATTCCAGATAACGCTTGCATCCTCTATATTACCACGACTAC 25536866
Query 256 TGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||| ||||||||| ||||||||| ||| ||
Sbjct 25536865 TGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 25536831
>seq12
Length=35429946
Score = 105 bits (116), Expect = 1e-20
Identities = 188/272 (69%), Gaps = 2/272 (1%)
Strand=Plus/Plus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
||||| |||||| | |||||| || |||| | |||||||| | | || ||||
Sbjct 24050504 CTCAGTGTCAGTGTCAACCCAGCAGAATGCTTTCGTCGTTGGTGTTCTTTCTGATCTCTA 24050563
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
||||||||||| | ||| |||||| |||| || | | |||| || | |||
Sbjct 24050564 CGCATTTCACCACACCACCAAAAATTCCCTCTGCCCCTACTGTACTCCAGCTTAGTTGTT 24050623
Query 136 TCAAATGCAGG-CTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194
|| | || | ||| |||||||||| | ||| ||| | ||||| || ||||
Sbjct 24050624 TCTACCGCTTGTCTA-GGGTTGAGCCTTGGGATTTGACAGCGGACTTAAAAAGCCACCTA 24050682
Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254
| | |||||| |||||| | | || |||| |||| | ||| |||||| ||||||||
Sbjct 24050683 TAGACACTTTACGCCCAATCATTTCGAATAATGCTTACATCCTTTGTATTATCGCGGCTG 24050742
Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286
|||||| ||||| ||| ||||||||||||
Sbjct 24050743 TTGGCACAGAGTTACCCGATGCTTATTCCTCA 24050774
Score = 102 bits (112), Expect = 1e-19
Identities = 106/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 152 GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCA 211
|||||||||| | ||| || | ||||| || |||||| | |||||| ||||
Sbjct 22125337 GGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCA 22125396
Query 212 ATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 271
|||| ||| |||||||||||| ||| ||||||||||||||||||||| |||||| |
Sbjct 22125397 ATAATTCCAGATAACGCTTGCATCCTCTATATTACCGCGGCTGCTGGCACAAAGTTAGTC 22125456
Query 272 GTGGCTTATTCCTCAGGTA 290
| ||||||||| ||| ||
Sbjct 22125457 GATGCTTATTCCCCAGATA 22125475
>seq5
Length=64140413
Score = 104 bits (114), Expect = 4e-20
Identities = 196/286 (69%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| |||| |||||| | | |||||| | || ||| | |||||||| |
Sbjct 8967303 GCTTTCGTCTCTCAATGTCAGTGTCGGCCCAGCAGACTGCTTTCATCGTTGGTGTTCTTT 8967244
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
|| ||||||||||||| |||| ||| ||||| ||||||| | | ||| ||
Sbjct 8967243 TCGATCTCTACGCATTTCATCGCTCCACCAAAAATTCTCCCTGCCTCTACCGTACTTCAG 8967184
Query 126 AAAAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
|||||| | | | | | | ||||||||||| | | ||| | | |||||
Sbjct 8967183 CTTGGTAGTTTCCATCGTCTGTCCA-GGGTTGAGCCCTTGGATTTGAAGACGGACTTAAA 8967125
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | |||||| |||||| | | |||||||||||||| ||| ||||
Sbjct 8967124 AAGCCACCTACAGACGCTTTACGCCCAATCATTTCGGATAACGCTTGCATCCTCTATATT 8967065
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| |||||| |||||| ||||| || ||||||||| ||| ||
Sbjct 8967064 ACAGCGGCTTCTGGCATAGAGTTAACCAATGCTTATTCCCCAGATA 8967019
Score = 86.0 bits (94), Expect = 1e-14
Identities = 169/250 (68%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 34 CCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACAC 93
||||||| || |||||| ||||||||| | || |||| | |||||| || | |||
Sbjct 49871390 CCAGCAAAGTGCTTTCGCCGCTGGTGTTCTTTTCGATCTCTATGTATTTCATCGTTCCAC 49871449
Query 94 ACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGG 153
| |||| ||||||| | |||| || |||||| | || | |||
Sbjct 49871450 CAGATATTCTCTCTGCCTCTACCATACTCCAGCTTGGTAGTTTCCACCGCTTGTCCAGGG 49871509
Query 154 TTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAAT 213
|||||||| | ||| | | ||||| | |||||| | ||||| ||||||
Sbjct 49871510 TTGAGCCCTAGGATTTGATGGCAGACTTAAAAAGTCACCTACAAACGCTTTATGCCCAAT 49871569
Query 214 AAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGT 273
| ||| |||||||||| | | | ||||||||||||||||||||| | |||||||
Sbjct 49871570 TATTCCAGATAACGCTTTCATCATCTGTATTACCGCGGCTGCTGGCATTGATTTAGCCGA 49871629
Query 274 GGCTTATTCC 283
|||||||||
Sbjct 49871630 TGCTTATTCC 49871639
>seq2
Length=62769430
Score = 104 bits (114), Expect = 4e-20
Identities = 194/285 (68%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || || | |||||||| |
Sbjct 30562406 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTTACAGTTGGTGTTCTTT 30562347
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || ||||||| |||||| || ||| |||||| | || || | | |||| |
Sbjct 30562346 CCGATCTCTACGCCTTTCACTGCACCACTAAAAATTCCCTCTACCCCTACCGTACTCCAT 30562287
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
| || ||| | ||| | |||||||||| | ||| || | |||||
Sbjct 30562286 ATTGGTAGCTTCCACTGCCTGTCCAGGGTTGAGCCTTGGGATTTGACGGCAGACTTAAAA 30562227
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||| ||||||||||| ||| |||||||
Sbjct 30562226 AGCCACCTACAGACACTTTACGCCCAATCATTCCGAATAACGCTTGCATCCTCCGTATTA 30562167
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| ||||| |||| | ||||||||| ||||||||| ||| ||
Sbjct 30562166 CCACGGCTACTGGTAAAGAGTTAGCCGATGCTTATTCCCCAGATA 30562122
Score = 93.3 bits (102), Expect = 7e-17
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| |||||| | |||||| |||||| | |||||||||||||||| ||| ||||||||
Sbjct 7320809 CCACCTACAGACACTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTATTACC 7320868
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCA 286
||||||| ||||| ||||||| | ||||||||| ||
Sbjct 7320869 GCGGCTGTTGGCATAAAGTTAGCTGATGCTTATTCCCCA 7320907
Score = 73.4 bits (80), Expect = 7e-11
Identities = 88/120 (73%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| |||||||| |
Sbjct 29828025 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 29828084
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
|| |||||||||||||||||| ||| | |||||| ||||||| | | |||| ||
Sbjct 29828085 TCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCTCTACCGTACTCCAG 29828144
>seq13
Length=58321163
Score = 93.3 bits (102), Expect = 7e-17
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 192 CTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGG 251
||||| | |||||| |||||| | | |||||||||||||| ||| | ||||||||||
Sbjct 28621054 CTACAAACGCTTTACGCCCAATCATTTCGGATAACGCTTGCATCCTCTGCATTACCGCGG 28621113
Query 252 CTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| |||||| |||||||| | ||||||||| ||| ||
Sbjct 28621114 CTGTTGGCACAAAGTTAGCCATTGCTTATTCCCCAGATA 28621152
>seq11
Length=62681010
Score = 93.3 bits (102), Expect = 7e-17
Identities = 83/102 (81%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTG--CCACCTACGTATTACCG 248
|||||| | ||||||||||||| | ||||||||||||||| ||| ||| ||||||||
Sbjct 21503443 CCTACAAACGCTTTACACCCAATCATTCCGGATAACGCTTGCACCATCTA--TATTACCG 21503386
Query 249 CGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|| ||||| |||| |||||||| ||||||||| ||| ||
Sbjct 21503385 CGACTGCTAGCACAGAGTTAGCCAATGCTTATTCCCCAGATA 21503344
Score = 84.2 bits (92), Expect = 4e-14
Identities = 169/248 (68%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATT-C 102
|| ||| | | |||||||| | | |||||||||||||||||| || ||| || |||| |
Sbjct 50302701 GCTTTCACTATTGGTGTTCTTTCTGATATCTACGCATTTCACCACTCCAC-CGAAATTTC 50302643
Query 103 CGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCA 162
| ||||| || | | |||| | |||||| | | | |||||||||||
Sbjct 50302642 CCTTTGCCCCTACCGTACTCCAACTTGGTAGTTTCCACCACCTGTCCAGGGTTGAGCCCT 50302583
Query 163 TAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGA 222
| ||| | || || || |||| | |||||| |||||| | || |||
Sbjct 50302582 GGGATTTGATGGTGGATTTAAAAAGCCACCTATAGAAGCTTTACCCCCAATCATTCTGGA 50302523
Query 223 TAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||| |||||| ||| |||||||||||||||||||||| |||||| ||||||||
Sbjct 50302522 TAATGCTTGCATCCTCTGTATTACCGCGGCTGCTGGCACAGAGTTAGGTCATGCTTATTC 50302463
Query 283 CTCAGGTA 290
||| ||
Sbjct 50302462 ACCAGATA 50302455
Score = 78.8 bits (86), Expect = 2e-12
Identities = 75/96 (78%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247
|| || ||| | |||||| |||||| | ||| ||||| ||||| |||| |||||||
Sbjct 22254391 CCACCAACATACGCTTTACGCCCAATTATTCCAAATAACACTTGCATCCTATGTATTACT 22254450
Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
|||||||||||||| | |||| || |||||||||
Sbjct 22254451 GCGGCTGCTGGCACAAATTTAGTCGATGCTTATTCC 22254486
>seq6
Length=51074515
Score = 84.2 bits (92), Expect = 4e-14
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 55 TGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTC 114
|||||||| | | || ||||||||||||| |||| ||| | || ||| | || ||
Sbjct 14390420 TGGTGTTCTTTCTAATCTCTACGCATTTCATCGCTCCACTGGAAACTCCTTCTACCCCTA 14390361
Query 115 CAGCACTCAAGAAAAACAGTTTCAAATG-CAGGCTATGGGTTGAGCCCATAGTTTTCACA 173
| | |||| || || |||||| | | | | | | ||||||||| | ||| ||
Sbjct 14390360 CTGTACTCCAGCTTAATAGTTTCCATCGTCTGTCCA-GGGTTGAGCTTTGGGATTTAACG 14390302
Query 174 TCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCC 233
| ||| | || |||||| | |||||| || ||| | || |||||| ||||||
Sbjct 14390301 GCAGACCTAAAAAGCCACCTACATACGCTTTACTCCTAATTATTCTGGATAATGCTTGCA 14390242
Query 234 ACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283
||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct 14390241 TCCTCTATATTATTGCGGCTGCTGGCACAGAGTTAGCCAATTCTTATTCC 14390192
Score = 82.4 bits (90), Expect = 1e-13
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 152 GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCA 211
||||||||||| || ||| ||| | ||||| || |||| | | |||||||||||
Sbjct 37361944 GGTTGAGCCCAGAGATTTGACAGCGGACTTAAAAAGCCACCTATAGACGCTTTACACCCA 37362003
Query 212 ATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 271
|| | ||| |||||| |||| ||| |||||| ||| || ||||||| ||||| ||
Sbjct 37362004 ATCATTCCAGATAACATTTGCATCCTCTATATTACTGCGACTACTGGCACAGAGTTAACC 37362063
Query 272 GTGGCTTATTCCTCA 286
||||||||| ||
Sbjct 37362064 AATGCTTATTCCCCA 37362078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828791698014
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |