Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1034 268 1e-69 seq1 253 3e-65 seq7 250 4e-64 seq11 208 1e-51 seq10 201 2e-49 seq2 201 2e-49 seq6 196 8e-48 seq5 194 3e-47 seq9 187 4e-45 seq13 181 2e-43 seq12 152 8e-35 seq8 141 1e-31 seq4 125 1e-26 >seq1034 Length=160161 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 112282 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 112223 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 112222 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 112163 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 112162 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 112103 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 112102 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 112043 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 112042 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 112010 Score = 268 bits (296), Expect = 1e-69 Identities = 224/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 136534 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 136593 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 136594 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 136653 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 136654 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 136713 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 136714 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 136773 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 136774 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 136806 >seq1 Length=55868233 Score = 253 bits (280), Expect = 3e-65 Identities = 222/274 (81%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 23409233 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 23409174 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 23409173 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 23409114 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 23409113 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 23409054 Query 183 ACGTTCTGAA-CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||||| ||| ||| ||| || ||||||||||||||||||||||||||||| || Sbjct 23409053 ACGTTCTGAACCCCCCCTCCCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACA 23408994 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| |||||||||| | || |||||||||||| Sbjct 23408993 TACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 23408960 Score = 196 bits (216), Expect = 8e-48 Identities = 194/251 (77%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | ||||||||| ||| || ||| |||||| ||||| ||| | Sbjct 23420185 CAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 23420244 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 23420245 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 23420304 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||| | |||||| ||| ||| Sbjct 23420305 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTTTAAACCCAACTCACGT 23420364 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || | Sbjct 23420365 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 23420424 Query 265 AGCCGACATCG 275 || |||||||| Sbjct 23420425 AGTCGACATCG 23420435 Score = 134 bits (148), Expect = 2e-29 Identities = 153/203 (75%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | ||||||| |||| ||||| | || || || |||||| |||||| | | || Sbjct 4627289 GGCACGATAACTGGTACACCTGAGGTGCGCCCTTCTCGATCCTCTTGTACTAGGAAAAGG 4627348 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || |||||||| | || | ||| | ||||||||| || ||| ||| Sbjct 4627349 TCCTCTCAATGCTCTAACGCCCACACCAGAAATGGAACTAACTGTCTCAGGATGTTTTGA 4627408 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 |||| |||| | | | ||||||| |||||||| |||||||||||| || || | || || Sbjct 4627409 ACCCTGCTCACATATCACTTTAATAGGCGAACAACCCAACCCTTGGAACATATTACAACC 4627468 Query 252 CCAGGATGA-GACGAGCCGACAT 273 ||| | ||| || ||||||| || Sbjct 4627469 CCAAG-TGACGAAGAGCCGAAAT 4627490 Score = 86.0 bits (94), Expect = 1e-14 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 134 CTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAAC 193 |||| || |||| | | ||| || ||| |||||||| ||| || | || |||| || Sbjct 10015838 CTCTTAATTTTCTAATGTCCATATCGAATATGGACCGAATTGTTTCACAACATTCTAGAC 10015779 Query 194 CCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCC 253 ||||| | | |||||||||||||||||||||| ||||| || |||| ||| | | Sbjct 10015778 TCAGCTTATATATCACTTTAATGGGCGAACAGCCCAAACCTTGAAACATACTACAGACTC 10015719 Query 254 AGGATGAGACGAGCCGACATCG 275 ||| | | |||||||||||| Sbjct 10015718 AGGTAGTAAAGAGCCGACATCG 10015697 >seq7 Length=60982465 Score = 250 bits (276), Expect = 4e-64 Identities = 212/260 (82%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| ||||| ||| |||| ||| |||||| | | | | |||| Sbjct 32400109 CTTAGATGCTTTCAGCAGTTATCTGCTCCGCACTTGGCTACCCAGCATTTACCATGGGCA 32400168 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | || |||| |||||||||| |||| ||||||||||||||||||| ||| || |||| Sbjct 32400169 CGATAATTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCT 32400228 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || |||||||| | |||| ||||||||||||||| ||| |||||||||| Sbjct 32400229 CTCAATGCTCTAACGCCCACACCAGATATGGACCGAACTGTCTCATGACATTCTGAACCC 32400288 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||| Sbjct 32400289 AGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAG 32400348 Query 256 GATGAGACGAGCCGACATCG 275 | |||| |||||||||||| Sbjct 32400349 GTGGAGAAGAGCCGACATCG 32400368 Score = 154 bits (170), Expect = 2e-35 Identities = 191/260 (73%), Gaps = 1/260 (0%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| || ||| |||||| || | |||| ||| |||||| | | | | || | Sbjct 42173386 CTTAGATGCTTTTAGCAGTTATCCACTCTACACTTGGCTACCCAGCGTTTACTGTGGGTA 42173445 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 || |||| || ||| |||||| |||||||| ||||||| |||||| ||| | || | Sbjct 42173446 TTATAACTAGTACACTAGAGGTGCATCCATCCCAGTCCTCTAGTACTACGGAAACGTCAT 42173505 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 |||||| || | |||||| || ||| || ||||| |||| || |||| ||||| Sbjct 42173506 CTCAAAGCTCTAATGCCCACACCGAATATGGTTTGAACTATCTCATGAAATTCTAAACCC 42173565 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 | ||| || || ||||| ||||||| |||||||||||||| || |||| | || || Sbjct 42173566 AACTCATGTACCATTTTAAAGGGCGAATAGCCCAACCCTTGGAACATACTATATCCTCAA 42173625 Query 256 GATGAGACGAGCCGACATCG 275 | | || |||||||||||| Sbjct 42173626 GTGGTGAAGAGCCGACATCG 42173645 Score = 145 bits (160), Expect = 1e-32 Identities = 194/272 (71%), Gaps = 17/272 (6%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| |||||| ||||| ||| |||| ||| |||||| Sbjct 427586 GGTGGGCTTACTACTTAGATGCTTTCAGCAATTATCTGCTCCGCACTTGGCTACCCAGCG 427527 Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123 | | ||| |||| |||||| |||| ||| ||| |||||||| Sbjct 427526 TTTACCGTGG-------------GCACGAGAGGTGCGTCCTTCCTGGT----TCGTACTA 427484 Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA 183 ||| || ||||||||| || |||||||| |||||| ||||| |||| |||| ||| Sbjct 427483 GGGAAAGGTCCTCTCAATGCTCTAACGCCCACATCGGATATGGACCAAACTATCTCACGA 427424 Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243 ||||||||| || || ||| || | |||||||| |||||||||||||||| | || || Sbjct 427423 TGTTCTGAACATAGTTCACGTACCGCCTTAATGGGTGAACAGCCCAACCCTTAGAACATA 427364 Query 244 CTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || | |||| | || |||| ||||||| Sbjct 427363 CTACAATCTCAGGTGGCGAAGAGCTGACATCG 427332 Score = 98.7 bits (108), Expect = 2e-18 Identities = 128/175 (73%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 82 CTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAA 141 ||||| ||||||||| || |||| || | ||||| || ||| || | ||||||| Sbjct 20144132 CTGGT--ACCAGAGGTGCATCATTCCCAGTTTTTTCGTATTAGGGAAAGGTTCTCTCAAT 20144075 Query 142 TTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCG 201 | | ||| || | |||| ||||| || |||||| ||| |||| ||||| ||||| Sbjct 20144074 GCTTTAATGCC-ACACCAGATATGGACCAAATTGTCTCACGATGTTCAGAACCTAGCTCA 20144016 Query 202 CGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGG 256 || || |||||||||||||||| || ||||||||| || || | || | |||| Sbjct 20144015 TGTACCACTTTAATGGGCGAACAACCTAACCCTTGGAACATAATATAGTCTCAGG 20143961 >seq11 Length=62681010 Score = 208 bits (230), Expect = 1e-51 Identities = 193/241 (80%), Gaps = 3/241 (1%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||||| |||||| ||| |||| ||| |||||| | | | | |||| Sbjct 33847994 CTTAGATGCTTTCAGCAGTTATCCACTCCGCACTTGGCTACCCAGCATTTACCGTGGGCA 33847935 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||| | |||||||||| ||||| || ||| |||||||||||||||| || |||| Sbjct 33847934 CGATAACTACTACACCAGAGGTGTGTCCTTCTCGG-CCTCTCGTACTAAGGAAAGGTCCT 33847876 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA-CGTTCTGAACC 194 ||||| || |||||||| | ||| ||||||||||||||| ||| ||||||||||| Sbjct 33847875 CTCAATGCTCTAACGCCCACACCAAATATGGACCGAACTGTCTCACGAACGTTCTGAACC 33847816 Query 195 CAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCA 254 |||||| ||| || ||||||||||| |||| |||||||||||| || |||| || ||||| Sbjct 33847815 CAGCTCACGTACCGCTTTAATGGGCAAACAACCCAACCCTTGGAACATACTACAACCCCA 33847756 Query 255 G 255 | Sbjct 33847755 G 33847755 >seq10 Length=62175169 Score = 201 bits (222), Expect = 2e-49 Identities = 209/273 (77%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||| |||| | ||| |||| ||| | ||| Sbjct 47976859 GGCGGGCTTACTACTTAGATGCTTTCATTAGTTATACGCTCCGCACTTGGCTAACTAGCA 47976800 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 47976799 TTTACCGTGGGCATGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 47976740 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | || || ||||||||| ||| |||||||| | |||| ||||| || |||||| | Sbjct 47976739 ATTGAAAGGTCCTCTCAATGTTCTAACGCCCACATCAGATATGGACCAAATTGTCTCATG 47976680 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||| |||| ||||| ||| || |||||||||| ||| |||| ||||||||| || | Sbjct 47976679 ACGTTCTAAACCTAGCTCACGTACCGCTTTAATGGGTGAATAGCCTAACCCTTGGAACAT 47976620 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || ||||||| |||| Sbjct 47976619 ACTACAGCCCCAGGTGGCGAAGAGCCGATATCG 47976587 Score = 109 bits (120), Expect = 9e-22 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||| || |||||||||| ||| | || |||||||| ||||| ||| || Sbjct 7585219 GGCACGATAACTAGTACACCAGAGGTGCATCCTTTCCAGTCCTCTCATACTAGGGAAAGA 7585278 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || |||||||| | ||| ||||||||||||||| |||| |||| | Sbjct 7585279 TCCTCTCAATGTTTTAACGCCCACACTGAATATGGACCGAACTGTCTCACGACATTCTAA 7585338 Query 192 ACCCAGCTCGCGTGCCTCTTTAA 214 | ||||||| ||| | |||||| Sbjct 7585339 ATCCAGCTCACGTACTGCTTTAA 7585361 >seq2 Length=62769430 Score = 201 bits (222), Expect = 2e-49 Identities = 209/273 (77%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| |||||| |||||| ||| |||| ||| || ||| Sbjct 54039408 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCTAGCG 54039467 Query 64 ATG-CACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||| | ||||||| || ||||||| ||| |||||||||||||||||| Sbjct 54039468 CTTACTGTGGGCACGATAACTGGTACATCAGAGGTGCGTCATTCCCGGTCCTCTCGTACT 54039527 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| | |||| ||| |||| |||||| || Sbjct 54039528 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCAGATATGGATCGAATTGTCTCACG 54039587 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||| |||||| |||| | | || |||||||||||||||| ||||||| |||| || | Sbjct 54039588 ACGTTTTGAACCTAGCTTACATACCGCTTTAATGGGCGAACAACCCAACCATTGGAACAT 54039647 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| || ||| ||| | || |||||||||||| Sbjct 54039648 ACTACATCCCTAGGTGGCGAAGAGCCGACATCG 54039680 Score = 179 bits (198), Expect = 6e-43 Identities = 205/273 (75%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| |||||| ||| | ||| |||| || |||| | Sbjct 40971450 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTACCTGCTCCGCACTTTACTGCCCAACG 40971391 Query 64 ATGCACTTGG-CAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | ||| || | || ||| |||||||||| |||| |||||||||| || |||| Sbjct 40971390 TTTATCGTGGGCACGATAATTGGA-CACCAGAGGTGCGTCCTTCCCGGTCCTTTCTTACT 40971332 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || || ||||| ||||| ||| |||||||||| | Sbjct 40971331 AGGGAAAGGTCCTCTCAATGCTCTAACACCCACACTGGATATGGATTGAACTGTCTCATG 40971272 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 || ||||||||||||||| ||| ||||||||| | ||||||||||||||||| || | Sbjct 40971271 ACATTCTGAACCCAGCTCACGTATGGCTTTAATGGACAAACAGCCCAACCCTTGGAACAT 40971212 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 40971211 ACTACAGCCCCAGGTAGTGAAGAGCCGACATCG 40971179 Score = 152 bits (168), Expect = 8e-35 Identities = 126/151 (83%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 126 GACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACG 185 || || ||||||||| || |||||||| ||||| ||| ||||||||||| ||||| Sbjct 1819354 GAGAGGTCCTCTCAATGCTCTAACGCCCACACTGGATATGGATCGAACTGTCTCACGACG 1819413 Query 186 TTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACT 245 ||||||||| ||||| ||| || |||||||||||||||||| ||||||||| ||||||| Sbjct 1819414 TTCTGAACCTAGCTCACGTACCGTTTTAATGGGCGAACAGCCTAACCCTTGGAACCTACT 1819473 Query 246 TCAGCCCCAGGATGA-GACGAGCCGACATCG 275 |||||||| | ||| || |||||||||||| Sbjct 1819474 ACAGCCCCAAG-TGACGAAGAGCCGACATCG 1819503 Score = 80.6 bits (88), Expect = 4e-13 Identities = 58/67 (87%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 209 CTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCC 268 ||||||||||||||||||||||||||||| || |||| ||||||| | | || ||||| Sbjct 1546987 CTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTATAGCCCCATGTGGCGAAGAGCC 1547046 Query 269 GACATCG 275 ||||||| Sbjct 1547047 GACATCG 1547053 >seq6 Length=51074515 Score = 196 bits (216), Expect = 8e-48 Identities = 194/250 (78%), Gaps = 1/250 (0%) Strand=Plus/Plus Query 27 TTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGG 85 |||| | |||||| |||| |||| ||| |||| | | | | |||| | || ||| Sbjct 19643791 TTCAACAATTATCCGCTCCACACTTGGCTACCCAACGTTTATTGTGGGCACAATAATTGG 19643850 Query 86 TGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTC 145 | |||||||||| |||| ||||||||||||| ||||| || || ||||| ||| || Sbjct 19643851 TACACCAGAGGTGCGTCCTTCCCGGTCCTCTCATACTAGAGAAAGGTCCTCCCAATGCTC 19643910 Query 146 CTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTG 205 | ||||| || ||| |||| |||||||||| ||||||||| |||||||||| || Sbjct 19643911 TAATGCCCATACCGAATATGGACTGAACTGTCTCACGACGTTCTAAACCCAGCTCATGTA 19643970 Query 206 CCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGA 265 ||||||||||||||||||||||||||||| || |||| |||||||||| || || || Sbjct 19643971 TTGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTTGCGAAGA 19644030 Query 266 GCCGACATCG 275 |||||||||| Sbjct 19644031 GCCGACATCG 19644040 >seq5 Length=64140413 Score = 194 bits (214), Expect = 3e-47 Identities = 180/227 (79%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 48 ACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 |||| ||| |||||| | | | | ||| | ||||||| ||| |||||| |||| || Sbjct 51575858 ACTTGGCTACCCAGCGTTTACCGTGGGCGCGATAACTGGTACACTAGAGGTGCGTCCTTC 51575799 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||||||||| |||||| || || ||||||||| || |||||||| | |||| || Sbjct 51575798 CCGGTCCTCTTGTACTAGGGCAAGGTCCTCTCAATGCTCTAACGCCCACACCAGATATGG 51575739 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||||||||||||| ||| ||||| |||| ||||| ||| || |||||||||||||||| | Sbjct 51575738 ACCGAACTGTCTCACGATGTTCTAAACCTAGCTCACGTACCGCTTTAATGGGCGAACAAC 51575679 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 |||| |||||| || |||| |||||||||| | || |||||||||| Sbjct 51575678 CCAAACCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACAT 51575632 Score = 192 bits (212), Expect = 9e-47 Identities = 205/271 (76%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| |||||| |||| || | |||| ||| ||| || Sbjct 49865424 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATTCCCTTTGTACTTGGCTACCCCGCG 49865483 Query 64 ATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTA 123 | | | ||| | ||||||| ||||| |||| |||| || |||||||||||||||| Sbjct 49865484 TTACCGTACGCACGATAACTGGTACACCATAGGTGCGTCCTTCTCGGTCCTCTCGTACTA 49865543 Query 124 AGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGA 183 | | | |||||| || || ||||||| |||||| |||||||| |||||| ||| Sbjct 49865544 GGAAAATGTCCTCTTAATGCTCTAACGCCCATACCGGATATGGACCGAATTGTCTCACGA 49865603 Query 184 CGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTA 243 ||||||||||||||||| | | | |||||||||||||||| |||||||||||| | || Sbjct 49865604 CGTTCTGAACCCAGCTCACCTATCGCTTTAATGGGCGAACAACCCAACCCTTGGAATATA 49865663 Query 244 CTTCAGCCCCAGGATGAGACGAGCCGACATC 274 || |||| |||| | || ||||||||||| Sbjct 49865664 CTACAGCTCCAGTTGGCGAAGAGCCGACATC 49865694 >seq9 Length=70713020 Score = 187 bits (206), Expect = 4e-45 Identities = 198/260 (76%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGC-A 75 ||||||||| |||||| ||||| || |||| ||| |||||| | | ||| | Sbjct 18946747 CTTAGATGCTTTCAGCAGTTATCTGCTCTGCACTTGGCTACCCAGCGTTTATCGTGGATA 18946688 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | |||| || |||||||||| ||| | ||||||||||||||| ||| || |||| Sbjct 18946687 CGATAACTAGTACACCAGAGGTGCATCCTTTTTGGTCCTCTCGTACTAGGGAAAGGTCCT 18946628 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || | ||| || |||| | ||||||||||||||| |||| |||||||||| Sbjct 18946627 CTCAATGCTCTAATGCCTACACCGGACATGGACCGAACTGTCTCACGACATTCTGAACCC 18946568 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 ||||| || | |||||||||||||||| |||||||||||| || |||| |||||||| Sbjct 18946567 AGCTCATGTATCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCCCAA 18946508 Query 256 GATGAGACGAGCCGACATCG 275 | | | |||||||||||| Sbjct 18946507 GTGGCAAAGAGCCGACATCG 18946488 >seq13 Length=58321163 Score = 181 bits (200), Expect = 2e-43 Identities = 205/272 (75%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCT 63 || |||||| ||||||||| || ||| ||||| ||| |||| ||| |||| | Sbjct 17860875 GGTGGGCTTACTACTTAGATGCTTTTAGCAGTTATCTGCTCCGCACTTGGCTACCCAACG 17860934 Query 64 ATGCACTTGG-CAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | ||| || | ||||||| ||| |||||| |||| |||||||||||||||||| Sbjct 17860935 TTTATCGTGGGCACGATAACTGGTACACTAGAGGTACGTCCTTCCCGGTCCTCTCGTACT 17860994 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || |||||| || || |||||||| | |||| || | |||||||||| | Sbjct 17860995 A-GGAAAGGTCCTCTTAATGCTCTAACGCCCACACCAGATATGGGCTGAACTGTCTCATG 17861053 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||| || || || |||||| ||||||||||| |||| || ||||||||| || | Sbjct 17861054 ACGTTCTATGCCTAGGTCACGTGCCGCTTTAATGGGCAAACAACCTAACCCTTGGAACAT 17861113 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATC 274 ||| |||||||||| | || ||||| ||||| Sbjct 17861114 ACTACAGCCCCAGGTGGCGAAGAGCCAACATC 17861145 >seq12 Length=35429946 Score = 152 bits (168), Expect = 8e-35 Identities = 151/194 (78%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| | |||| ||| |||||| Sbjct 8515693 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCCTCGCACTTGGCTACCCAGCG 8515752 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | |||| || || ||||||| |||| |||||||||||||||||| Sbjct 8515753 TTTACCGTGGGCACGATAACTAGTACAGCAGAGGTGTGTCTTTCCCGGTCCTCTCGTACT 8515812 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 8515813 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 8515872 Query 183 ACGTTCTGAACCCA 196 |||||||||||||| Sbjct 8515873 ACGTTCTGAACCCA 8515886 >seq8 Length=57128820 Score = 141 bits (156), Expect = 1e-31 Identities = 139/179 (78%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 96 GTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGC 151 ||| | ||| ||| |||||||||||||| || ||||||| || | ||| || | Sbjct 36737613 GTTGGCCCAACCCAGTCCTCTCGTACTAGGGCTGGCTCCTCGCAGTTCTCCCTTTAACAC 36737554 Query 152 CCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTT 211 | ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| || ||| Sbjct 36737553 CAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTT 36737494 Query 212 TAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGA 270 ||| || ||||| || |||||||||||||| ||||| ||||| |||| || ||| ||| Sbjct 36737493 GAATCGGTGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAAGATGTGATGAGTCGA 36737435 >seq4 Length=62178258 Score = 125 bits (138), Expect = 1e-26 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111 TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCG 170 ||||||| ||||| ||| || ||||||||| || || ||||| |||||| ||| || Sbjct 11620648 TCCTCTCATACTAGGGAAAGGTCCTCTCAATGCTCTAACACCCACACCGGATATGGATCG 11620589 Query 171 AACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAA 230 ||||||||| ||| ||||| |||| ||||| | | || |||||||||||||||| |||| Sbjct 11620588 AACTGTCTCACGATGTTCTAAACCTAGCTCACATACCGCTTTAATGGGCGAACAAACCAA 11620529 Query 231 CCCTTGGGACCTAC 244 ||||||| || ||| Sbjct 11620528 CCCTTGGAACATAC 11620515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780792178824