Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12]
1,528 sequences; 3,027,844,945 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq1528 75.2 1e-11
seq16 75.2 1e-11
seq14 75.2 1e-11
seq9 75.2 1e-11
seq1 75.2 1e-11
>seq1528
Length=301004
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 132125 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 132066
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 132065 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 132017
>seq16
Length=188620566
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 26918710 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 26918769
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 26918770 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 26918818
>seq14
Length=174509413
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 135292839 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 135292780
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 135292779 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 135292731
>seq9
Length=209865144
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 96748243 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 96748184
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 96748183 TTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCAC 96748135
>seq1
Length=153905722
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||| ||||||||| | | || ||||||||||||| || |||||| |||
Sbjct 4489695 GTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTG 4489754
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAAC 132
|||| | ||| |||| |||||| || |||||| ||||| | || ||
Sbjct 4489755 TTCGACCAGTCGGTCTCACAGTCAGGCATGCTTATACCATTACGCTCAC 4489803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473592989536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |