Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq29 71.6 8e-11
>seq29
Length=1368273
Score = 71.6 bits (78), Expect = 8e-11
Identities = 83/112 (74%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||| ||||||||||||||||| ||| || | || |||| ||| |||||| |
Sbjct 1313934 GAACCTAAAGACTTTGATTTCTCATAAAGTACAGACAAAGTCTTAATAGCAACATCCACA 1313875
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTC 112
|||||| |||| ||| ||||| | || ||| || |||||||| ||| ||
Sbjct 1313874 TATCCCTGGTCGACATTGTTTAGGTTTGAGATTAAAACGGTATCCAATCTTC 1313823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278384146860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |