Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq29 138 2e-30 >seq29 Length=1368273 Score = 138 bits (152), Expect = 2e-30 Identities = 181/244 (74%), Gaps = 5/244 (2%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||| ||||| ||||||||||| |||| | || | | || | |||||||||| ||| | Sbjct 1313579 TTACATTGAAGAAATTAGAGTGCTCAACGTAGACTTACACTTGTATACATTAGCTTGGGA 1313638 Query 135 TAATAGAATAGGACGT-GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 ||| | || | | || ||||||| |||||| | | || | ||||||||||| Sbjct 1313639 TAACATCATTTGTTTTCTCGATTCTATTGTGTTGGCCT-TCAGATTGGAGTAATGATTAA 1313697 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 | ||||| ||||| ||| || | || || ||||||||||||||||||||||| | Sbjct 1313698 CAAATATAGTAGGGGGATTCA-TACTTCATAGTTAGAGGTGAAATTCTTGGATTTATGAA 1313756 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 | | ||| ||| || |||| || |||| |||||||||||||||| | ||| ||||||| Sbjct 1313757 AAATGAACAACTACG-AAGCATTTGCCAATGATGTTTTCATTAATC-GAGAATGAAAGTT 1313814 Query 314 AGGG 317 |||| Sbjct 1313815 AGGG 1313818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915144410752