Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq29 132 2e-28 >seq29 Length=1368273 Score = 132 bits (146), Expect = 2e-28 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| ||||||||||||||| |||| |||| |||| |||||||||| || || || |||| Sbjct 1314530 GAGTTGAGTTGTTTGGGAATCCAGCCCTAATTGGGTGGTAAATTTCATCCAAGGCAAAAT 1314589 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | | | ||||| |||||| | ||||||| |||| |||||||||| | |||||| || Sbjct 1314590 ACTTACAAGAGATCGATAGTGAACAAGTACCGTGAGGAAAAGATGAAAGGGACTTTGAAA 1314649 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 | |||| ||| || | ||||||||| || || |||| Sbjct 1314650 GGTGAGTCAAAGAGTGCTTGAAATTGTCGAGAGAGAAG 1314687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079869712700