Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq29 132 2e-28
>seq29
Length=1368273
Score = 132 bits (146), Expect = 2e-28
Identities = 124/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| ||||||||||||||| |||| |||| |||| |||||||||| || || || ||||
Sbjct 1314530 GAGTTGAGTTGTTTGGGAATCCAGCCCTAATTGGGTGGTAAATTTCATCCAAGGCAAAAT 1314589
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| | | ||||| |||||| | ||||||| |||| |||||||||| | |||||| ||
Sbjct 1314590 ACTTACAAGAGATCGATAGTGAACAAGTACCGTGAGGAAAAGATGAAAGGGACTTTGAAA 1314649
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
| |||| ||| || | ||||||||| || || ||||
Sbjct 1314650 GGTGAGTCAAAGAGTGCTTGAAATTGTCGAGAGAGAAG 1314687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079869712700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |