Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 3e-18
>seq1
Length=15579451
Score = 98.7 bits (108), Expect = 3e-18
Identities = 176/253 (70%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||| | || || ||||||| || | || ||||||| | ||| ||
Sbjct 6750137 GCATCTTCGTAAATATGTCTATTTCACGGAATATCTCTCCGAGACAGTGTTCAGATCATT 6750196
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
| ||| || ||| || | |||||||| | ||| ||||||||||||||||||||| |
Sbjct 6750197 ATGCCTTTTGTGTGAGTTGAAACTTACCTAAAAAG-AATTTCGCTACCTTAGGACCGGTG 6750255
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192
| | |||| |||||||| |||||||||| || | | ||| | | | | || |
Sbjct 6750256 TAGATACGACCGCCGTTCACCGGGGCTTTCATTCAAACCTT---ATAACCCTTCTCCTT- 6750311
Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252
||||| |||| |||| ||||||| |||| | |||||| || | || | | || ||
Sbjct 6750312 -TTTAACTTTCCAGCACTGGGCAGGTGTCAGA--CTATACATCGAGTTACCTCTTAGCGA 6750368
Query 253 AGTGCTGTGTTTT 265
||| |||||||||
Sbjct 6750369 AGTCCTGTGTTTT 6750381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260723419008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |