Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 4e-27
>seq1
Length=15579451
Score = 127 bits (140), Expect = 4e-27
Identities = 160/216 (74%), Gaps = 14/216 (6%)
Strand=Plus/Plus
Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106
||||||||| || ||| ||| |||||| ||| | || | |||||||| | ||| ||||
Sbjct 6750177 GAGACAGTGTTCAGATCATTATGCCTTTTGTGTGAGTTGAAACTTACCTAAAAAG-AATT 6750235
Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT 166
||||||||||||||||| | ||| |||| |||||||| || |||||| |||| |
Sbjct 6750236 TCGCTACCTTAGGACCGGTGTAGATACGACCGCCGTTCACCGGGGCT----TTCA----T 6750287
Query 167 TCGATTGCTCTAACAGATCCCC---TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTA 223
|| | | |||| || || ||||| ||||||||| ||||||| ||||| |||
Sbjct 6750288 TCAAACCTTATAACCCTTCTCCTTTTTAACTTTCCAGCACTGGGCAGGTGTCAG--ACTA 6750345
Query 224 TACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259
||||||| || | |||||| | ||||||||||
Sbjct 6750346 TACATCGAGTTACCTCTTAGCGAAGTCCTGTGTTTT 6750381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062335469824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |