Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1 127 4e-27 >seq1 Length=15579451 Score = 127 bits (140), Expect = 4e-27 Identities = 160/216 (74%), Gaps = 14/216 (6%) Strand=Plus/Plus Query 47 GAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATT 106 ||||||||| || ||| ||| |||||| ||| | || | |||||||| | ||| |||| Sbjct 6750177 GAGACAGTGTTCAGATCATTATGCCTTTTGTGTGAGTTGAAACTTACCTAAAAAG-AATT 6750235 Query 107 TCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCT 166 ||||||||||||||||| | ||| |||| |||||||| || |||||| |||| | Sbjct 6750236 TCGCTACCTTAGGACCGGTGTAGATACGACCGCCGTTCACCGGGGCT----TTCA----T 6750287 Query 167 TCGATTGCTCTAACAGATCCCC---TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTA 223 || | | |||| || || ||||| ||||||||| ||||||| ||||| ||| Sbjct 6750288 TCAAACCTTATAACCCTTCTCCTTTTTAACTTTCCAGCACTGGGCAGGTGTCAG--ACTA 6750345 Query 224 TACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTT 259 ||||||| || | |||||| | |||||||||| Sbjct 6750346 TACATCGAGTTACCTCTTAGCGAAGTCCTGTGTTTT 6750381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062335469824