Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq29 82.4 2e-13 >seq29 Length=1368273 Score = 82.4 bits (90), Expect = 2e-13 Identities = 85/109 (78%), Gaps = 3/109 (3%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGG--GGACCCGCACAAGCGGTGGAGC 58 || || ||||| ||||||||| ||||||||||||| || | | ||| || ||||||| Sbjct 1313944 TATGATCGCAAAGTTGAAACTTGAAGGAATTGACGGAAGGGCAC-CACTAGGAGTGGAGC 1314002 Query 59 ATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 ||||| |||||| || |||||||| |||||| | ||| | | ||||| Sbjct 1314003 TTGTGGCTTAATTTGACGCAACGCGTGGAACCTCATCAAGTTTAGACAT 1314051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503908647040