Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq15 82.4 2e-13 >seq15 Length=6219335 Score = 82.4 bits (90), Expect = 2e-13 Identities = 98/132 (74%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAAC-CTCCTGGTTGTCTA 326 |||||||||| |||||| ||||||| |||||||||| || ||| ||| ||| ||||| Sbjct 4103185 TGAGCTATTATGCACTCGTTCAAGGGTGGCTGCTTCTTAGGCAAATCTCTTGGCTGTCTT 4103126 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | || |||||| ||||||| || || ||| ||||||||||| | Sbjct 4103125 TGCACCCTTACCTCCTTTATCACTGAGCAGTCATTTGAGGGTAGTAGCTGATGATACAAG 4103066 Query 387 CTGTTTCCCTCT 398 |||||||| ||| Sbjct 4103065 CTGTTTCCTTCT 4103054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177528472576