Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01001756.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq30 134 3e-29
>seq30
Length=1333793
Score = 134 bits (148), Expect = 3e-29
Identities = 185/256 (72%), Gaps = 16/256 (6%)
Strand=Plus/Minus
Query 22 GTGTAGGGGTGGGTAAAAATGG-AAATT--TGAAATGTTGGGGAGAGTCCGACCCGAATG 78
|||| ||| | || ||| |||| ||||| |||| ||||| |||| |||||| |
Sbjct 100254 GTGTTGGGATTGGCAAAGATGGGAAATTGTTGAA---TTGGGCAGAGCTCGACCCTGCCG 100198
Query 79 TTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGTTACCGGGTCGGTTT 138
| | ||||||||||| || || ||||| | | | |||||| |||||||||| |
Sbjct 100197 TAAGGGTCGGAGCATGTGGAGTTAGGCTTGGGGGTCGAGTCTTGGTCACCGGGTCGGAGT 100138
Query 139 ATCAAGGGGCCCCACATGGGTTCTTCTTAGT--AAATAACAACAAAAAGGATGGGCAAAA 196
||||||| || ||||||||||| | | | || |||| | |||| ||||||||
Sbjct 100137 ATCAAGGTGCACCACATGGGTTTTACATGGTGGAAATGA--------AGGAAGGGCAAAA 100086
Query 197 TAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTGCAATCTGGATG 256
| | |||||| ||||| ||| | |||||| |||||||| ||||| || || || ||
Sbjct 100085 TGGAAAATTGGAGAAGATCAGTGTGCTTGATGAGTTTTCTGGGTTTGTCCAGTCAGGCTG 100026
Query 257 CTGTGTGGAGATCTGA 272
||||||||| ||||||
Sbjct 100025 CTGTGTGGAAATCTGA 100010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918344216384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |