Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq30 134 3e-29 >seq30 Length=1333793 Score = 134 bits (148), Expect = 3e-29 Identities = 185/256 (72%), Gaps = 16/256 (6%) Strand=Plus/Minus Query 22 GTGTAGGGGTGGGTAAAAATGG-AAATT--TGAAATGTTGGGGAGAGTCCGACCCGAATG 78 |||| ||| | || ||| |||| ||||| |||| ||||| |||| |||||| | Sbjct 100254 GTGTTGGGATTGGCAAAGATGGGAAATTGTTGAA---TTGGGCAGAGCTCGACCCTGCCG 100198 Query 79 TTAAAGTCGGAGCATGCGGTGTGGATCTTGGTGATGGGACCTTGGTTACCGGGTCGGTTT 138 | | ||||||||||| || || ||||| | | | |||||| |||||||||| | Sbjct 100197 TAAGGGTCGGAGCATGTGGAGTTAGGCTTGGGGGTCGAGTCTTGGTCACCGGGTCGGAGT 100138 Query 139 ATCAAGGGGCCCCACATGGGTTCTTCTTAGT--AAATAACAACAAAAAGGATGGGCAAAA 196 ||||||| || ||||||||||| | | | || |||| | |||| |||||||| Sbjct 100137 ATCAAGGTGCACCACATGGGTTTTACATGGTGGAAATGA--------AGGAAGGGCAAAA 100086 Query 197 TAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGGATTTGTGCAATCTGGATG 256 | | |||||| ||||| ||| | |||||| |||||||| ||||| || || || || Sbjct 100085 TGGAAAATTGGAGAAGATCAGTGTGCTTGATGAGTTTTCTGGGTTTGTCCAGTCAGGCTG 100026 Query 257 CTGTGTGGAGATCTGA 272 ||||||||| |||||| Sbjct 100025 CTGTGTGGAAATCTGA 100010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918344216384