Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 6e-15
>seq2
Length=14367614
Score = 87.8 bits (96), Expect = 6e-15
Identities = 104/140 (74%), Gaps = 1/140 (1%)
Strand=Plus/Minus
Query 49 TGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTA 108
||||||| ||||| ||||||||||| | ||| | || |||||||||||| | |||
Sbjct 8275501 TGATCTATCCATGACCAGGATGAAGCTTTGGTGAAACTAAGTGGAGGTCCGAAACGACTG 8275442
Query 109 ATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAAC-AAACTTGGAA 167
|||| ||| ||| | ||||||| |||| ||| ||||||| || | | ||| | ||
Sbjct 8275441 ATGTCGAAGAATCAATGGATGAGTTGTGATTAGAGGTGAAATGCCACTCTGAACCTAAAA 8275382
Query 168 ATAGCTGGTTCTCTCCGAAA 187
||||| |||||| | ||||
Sbjct 8275381 CTAGCTAGTTCTCCCTGAAA 8275362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689497373696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |