Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4 156 1e-35 >seq4 Length=12062019 Score = 156 bits (172), Expect = 1e-35 Identities = 113/131 (86%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||| || |||| ||||| ||||| || ||||||| |||||||| |||||||||||| Sbjct 1263462 ATTCATTTGCATCACCAATTAAATGACAAGTCATTTGGGTACCTTAAAAGAGTCATAGTT 1263403 Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 ||| ||||||||||| |||||||||| |||||||||| |||||||||||||||| |||| Sbjct 1263402 ACTTCCGCCGTTTACTTGCGCTTGGTTAAATTTCTTCATTTTGACATTCAGAGCATTGGG 1263343 Query 512 CAGAAATCACA 522 | |||| ||| Sbjct 1263342 AAAAAATTACA 1263332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635100677952