Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq4 102 9e-17 >seq4 Length=12062019 Score = 102 bits (112), Expect = 9e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 |||||| |||| || | || |||||||| || ||||| |||||| ||||| || || Sbjct 8093541 GATGATAAATACATCTTAGATGCTGCTGAGGAGGCAGGAGTTGACCTGCCCTATTCTTGC 8093482 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 | ||||| |||||||| || |||||||| ||||| ||| | || ||||||||| Sbjct 8093481 AGGGCTGGAGCTTGCTCCACATGTGCTGGGAAGATAATTTCAGGTTCAGTGGATCAATCT 8093422 Query 161080 GATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCT 161139 || || ||||| |||||| | ||| | || |||| ||| ||||| || ||| | Sbjct 8093421 GACGGTTCCTTCCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTTCA 8093362 Query 161140 TATCCCACTTCTGA 161153 || || || || || Sbjct 8093361 TACCCGACCTCAGA 8093348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551334136777200