Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq842 134 8e-30 seq354 134 8e-30 seq94 134 8e-30 seq59 134 8e-30 seq49 134 8e-30 seq957 132 3e-29 seq114 116 2e-24 seq515 73.4 2e-11 >seq842 Length=479921 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 364218 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 364277 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 364278 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 364334 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| ||||||||||| ||||| || |||||| | Sbjct 414792 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGACGGAGTCCTAAAAGCAACATCCGTC 414851 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| || ||||| ||||| ||| | |||| |||||| ||||||||||||||| Sbjct 414852 GATCCCTGGTTGGCATCGTTTATTGTTGAAACTAGGACGGTGTCTGATCGTCTTCGA 414908 >seq354 Length=1203325 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 421724 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 421783 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 421784 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 421840 >seq94 Length=2365428 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 1591102 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1591161 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1591162 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1591218 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 1604415 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1604474 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 1604475 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 1604531 >seq59 Length=2824927 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 689655 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 689596 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 689595 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 689539 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 777871 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 777812 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 777811 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 777755 >seq49 Length=2931737 Score = 134 bits (148), Expect = 8e-30 Identities = 100/117 (85%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 2688778 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 2688837 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 2688838 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 2688894 >seq957 Length=373148 Score = 132 bits (146), Expect = 3e-29 Identities = 99/116 (85%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 219804 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 219863 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 ||||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||| Sbjct 219864 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCG 219919 Score = 125 bits (138), Expect = 4e-27 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 ||||||||||||||||||||||| ||||||||| ||| ||||| || || ||| | Sbjct 208185 GAACCCAAAGACTTTGATTTCTCATAAGGTGCC-AGCAGAGTCCTAAAAGCAATATCCGC 208243 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| |||||||| ||||| |||| |||||| ||||||||||||| |||||||| Sbjct 208244 CGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATTGTCTTCGA 208301 >seq114 Length=2223408 Score = 116 bits (128), Expect = 2e-24 Identities = 96/117 (82%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||||| ||||| || |||||| || Sbjct 1172703 GAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 1172762 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| ||||| |||| |||||| |||||||||| || ||||| || Sbjct 1172763 GATCCCTGGTCGACATCGTTTATGGTTGAGACTAGGACGGTATCTAATTGTCTTTGA 1172819 >seq515 Length=902303 Score = 73.4 bits (80), Expect = 2e-11 Identities = 87/117 (74%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||||||||||||| || ||||| || ||||| || ||||| | Sbjct 35173 GAATCCAAAGACTTTGATT-CTTAAAAGGTCTCGGCGGAGTCCTAAAAGCAACATTTGCT 35231 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| || |||||| | ||||| |||| ||| || || || |||||||||||||||| Sbjct 35232 GATCTCTTGTCGGCCTCGTTTATGGTTGAGATTAGGATGGAATCTGATCGTCTTCGA 35288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278380550280