Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq400 75.2 1e-11 >seq400 Length=1097662 Score = 75.2 bits (82), Expect = 1e-11 Identities = 123/175 (70%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65 ||| ||||| ||||||| | | ||| ||| ||||| ||| ||||| ||||| ||| || Sbjct 132512 ACGATGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCG 132453 Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125 |||| | | | ||| | | ||| || |||| | |||| || ||||| | | || Sbjct 132452 GGGAGTTGAAAATAAGCGTAGATTCGGAGATTCCTGAATAGGTCAACCTTTCAAACTGCT 132393 Query 126 GATATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 | | || ||| | ||||| || | ||| ||| |||||||||||||| |||| Sbjct 132392 GCTGAAT-ATATGGGTAGGCAAGAGAC-AACATGGCGAACTGAAACATCTTAGTA 132340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476765579212