Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq957 80.6 3e-13 seq842 80.6 3e-13 seq354 80.6 3e-13 seq94 80.6 3e-13 seq59 80.6 3e-13 seq49 80.6 3e-13 >seq957 Length=373148 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 220071 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 220129 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 220130 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 220167 >seq842 Length=479921 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 364485 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 364543 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 364544 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 364581 >seq354 Length=1203325 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 421991 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 422049 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 422050 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 422087 >seq94 Length=2365428 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1591369 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 1591427 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1591428 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1591465 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 1604682 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 1604740 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 1604741 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 1604778 >seq59 Length=2824927 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 689388 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 689330 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 689329 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 689292 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Minus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 777604 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 777546 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 777545 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 777508 >seq49 Length=2931737 Score = 80.6 bits (88), Expect = 3e-13 Identities = 78/98 (80%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71 |||||| |||||| || | |||||| | |||| |||||||||||||| | | ||||| Sbjct 2689045 CCAACACAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 2689103 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || |||||||| ||||||||||| |||| |||| || Sbjct 2689104 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 2689141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595157031768