Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq64213 82.4 4e-14
seq773 80.6 1e-13
seq27 80.6 1e-13
seq1594 75.2 5e-12
seq16027 71.6 6e-11
>seq64213
Length=580
Score = 82.4 bits (90), Expect = 4e-14
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||| |||||||| | |||| ||||||| ||||| ||| |||||||||
Sbjct 157 GGAAAAGAAACTAAAAAGGATTCCATTAGTACCGGCGAGGGAACATGGAGAAGCCCAGCG 216
Query 61 CCGAATCCCC 70
| ||||||||
Sbjct 217 CTGAATCCCC 226
>seq773
Length=277300
Score = 80.6 bits (88), Expect = 1e-13
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57
|||||| ||||| || |||||||||| ||||||||||||||||| ||||||||||||
Sbjct 80056 GGAAAATAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAAGAGCCCA 80112
>seq27
Length=1457134
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| |||||||| |||||
Sbjct 42141 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGGCCAGC 42083
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| |||||||| |||||
Sbjct 97517 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGTCCAGC 97459
Score = 78.8 bits (86), Expect = 4e-13
Identities = 52/58 (90%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58
|||||||||||| || |||||||||| |||||||||||| |||| ||||||||||||
Sbjct 88112 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGAGAACCAGGAAGAGCCCAG 88055
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||| || ||||||||||||||||||| ||| |||| || |||||||||||
Sbjct 50602 GGAAAAGAAATGTACAAGGATTCCCTCAGTAACGGGGAGCGAACCGGCAAGAGCCCAGC 50544
>seq1594
Length=313414
Score = 75.2 bits (82), Expect = 5e-12
Identities = 52/59 (88%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| || |||||||||| |||||||||||| |||| || |||||| ||||
Sbjct 190517 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGAAAGAGCTCAGC 190459
>seq16027
Length=16755
Score = 71.6 bits (78), Expect = 6e-11
Identities = 52/59 (88%), Gaps = 1/59 (2%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||| ||||| || |||||||||| |||||||| ||| |||| ||||||||||||||
Sbjct 4191 GGAAAA-AAACTTACAAGGATTCCCTTAGTAACGGTGAGCGAACCGGGAAGAGCCCAGC 4248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230232625920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |