Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq64213 82.4 4e-14 seq773 80.6 1e-13 seq27 80.6 1e-13 seq1594 75.2 5e-12 seq16027 71.6 6e-11 >seq64213 Length=580 Score = 82.4 bits (90), Expect = 4e-14 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||||| | |||| ||||||| ||||| ||| ||||||||| Sbjct 157 GGAAAAGAAACTAAAAAGGATTCCATTAGTACCGGCGAGGGAACATGGAGAAGCCCAGCG 216 Query 61 CCGAATCCCC 70 | |||||||| Sbjct 217 CTGAATCCCC 226 >seq773 Length=277300 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||| ||||| || |||||||||| ||||||||||||||||| |||||||||||| Sbjct 80056 GGAAAATAAACTTACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAAGAGCCCA 80112 >seq27 Length=1457134 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| |||||||| ||||| Sbjct 42141 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGGCCAGC 42083 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| |||||||| ||||| Sbjct 97517 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGTCCAGC 97459 Score = 78.8 bits (86), Expect = 4e-13 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 |||||||||||| || |||||||||| |||||||||||| |||| |||||||||||| Sbjct 88112 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGAGAACCAGGAAGAGCCCAG 88055 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||| || ||||||||||||||||||| ||| |||| || ||||||||||| Sbjct 50602 GGAAAAGAAATGTACAAGGATTCCCTCAGTAACGGGGAGCGAACCGGCAAGAGCCCAGC 50544 >seq1594 Length=313414 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| || |||||||||| |||||||||||| |||| || |||||| |||| Sbjct 190517 GGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGAAAGAGCTCAGC 190459 >seq16027 Length=16755 Score = 71.6 bits (78), Expect = 6e-11 Identities = 52/59 (88%), Gaps = 1/59 (2%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||| ||||| || |||||||||| |||||||| ||| |||| |||||||||||||| Sbjct 4191 GGAAAA-AAACTTACAAGGATTCCCTTAGTAACGGTGAGCGAACCGGGAAGAGCCCAGC 4248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230232625920