Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq15058 75.2 7e-12 seq27 75.2 7e-12 seq14 71.6 8e-11 >seq15058 Length=20236 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 17391 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 17334 Query 122 GCT 124 ||| Sbjct 17333 GCT 17331 >seq27 Length=1457134 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 9567 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 9624 Query 122 GCT 124 ||| Sbjct 9625 GCT 9627 >seq14 Length=827631 Score = 71.6 bits (78), Expect = 8e-11 Identities = 55/63 (87%), Gaps = 2/63 (3%) Strand=Plus/Plus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| | ||||| | ||||||||||| |||||||||||||||||||||| | |||| ||| Sbjct 38131 TTCAATTGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACACAA 38188 Query 122 GCT 124 ||| Sbjct 38189 GCT 38191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300581483840