Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq14700 107 4e-21
seq3752 107 4e-21
>seq14700
Length=25542
Score = 107 bits (118), Expect = 4e-21
Identities = 94/116 (81%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195
|||||||| ||| || | ||| || ||| ||||||||||||||||| |||||| | |
Sbjct 16537 TGCTGAATCCATGGGCAGACAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCGGA 16478
Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
|||||||||| ||| | ||||||| ||||| |||||||||||||||| |||||
Sbjct 16477 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCT 16422
>seq3752
Length=125219
Score = 107 bits (118), Expect = 4e-21
Identities = 170/239 (71%), Gaps = 11/239 (5%)
Strand=Plus/Plus
Query 14 GATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGT 73
||| ||| ||||| | || ||| ||||| ||||||| ||| | ||| | ||||||
Sbjct 103576 GATACCTAGGCGACCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCAGGGAGT 103635
Query 74 GAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATT 133
| ||| | | | |||||| ||||| | |||| || |||| ||| | | |
Sbjct 103636 T-GAAAATAAGCGTAGATCCGGAGATTCCTGAATAGGTCAACC------TTTCGAAC--T 103686
Query 134 GCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCT 192
|| |||||||| ||| || | ||| || ||| ||| |||| |||||||| || |||
Sbjct 103687 GC-TGCTGAATCCATGGGCAGACAAGAGACAACCTGGCAAACTAAAACATCTTAGAAGCC 103745
Query 193 GCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251
| ||||||||||| ||| | ||||||| ||||| ||||||||||||| || |||||
Sbjct 103746 GGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGAGAGCAGCCT 103804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 917688350208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |