Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01000026.1
Length=199
Score E
Sequences producing significant alignments: (Bits) Value
seq28723 123 3e-26
>seq28723
Length=2081
Score = 123 bits (136), Expect = 3e-26
Identities = 152/200 (76%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60
||| |||||| ||||||||||||||||| |||||||||||| |||||| ||||| |||
Sbjct 1212 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCTGTGCAATCGGAC 1153
Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120
||||||| | ||||| ||| | || || | || |||| ||| || ||||| ||
Sbjct 1152 CTCGTTAGTTCAACTTAACTGTAACTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 1093
Query 121 TCTCGG-GCACGGACCTTACCACCCATGC-CCTCACTCGCGCGGCATGACTGATGCGCAT 178
|||||| ||| ||||||| ||||| ||| ||||||| || ||| | || ||||
Sbjct 1092 TCTCGGCGCA-TGACCTTAGCACCC-TGCGCCTCACT-GCAGATCATATTTCAT-AGCAT 1037
Query 179 TCGGAGTTTGGCAGGACTTG 198
|||||||||| | ||| |||
Sbjct 1036 TCGGAGTTTGTCTGGATTTG 1017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536910064992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |