Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01000345.1
Length=193
Score E
Sequences producing significant alignments: (Bits) Value
seq81313 307 1e-81
seq77801 307 1e-81
>seq81313
Length=11173
Score = 307 bits (340), Expect = 1e-81
Identities = 184/193 (95%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 10924 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTTAACTAAAA 10865
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120
| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 10864 GTTAACTCGTCATCAGCTCTCGGCCTTAAGATCCCGGATTTACCTAAGATCTCAGCCTAC 10805
Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10804 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 10745
Query 181 TTAACCAGAAGTA 193
||||||||||||
Sbjct 10744 ATAACCAGAAGTA 10732
>seq77801
Length=9883
Score = 307 bits (340), Expect = 1e-81
Identities = 184/193 (95%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1775 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTTAACTAAAA 1716
Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120
| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 1715 GTTAACTCGTCATCAGCTCTCGGCCTTAAGATCCCGGATTTACCTAAGATCTCAGCCTAC 1656
Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1655 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 1596
Query 181 TTAACCAGAAGTA 193
||||||||||||
Sbjct 1595 ATAACCAGAAGTA 1583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517734705528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |