Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01000357.1 Length=131 Score E Sequences producing significant alignments: (Bits) Value seq122466 123 2e-26 >seq122466 Length=45916 Score = 123 bits (136), Expect = 2e-26 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60 |||||||| |||| || ||| |||||| | || || |||||| ||||||||| | Sbjct 2367 CTGGCGACGCTGCTCGGGTTCGTCATCGGCGTGGCGCGGCTGTCGCCGAACTGGATGATT 2426 Query 61 AACAAGCTGGCGACTGTCTACGTCGAGGTGTTCCGTAACATCCCGCCGCTGTTGCAGATC 120 |||||||||||||| || || || ||||||||||| ||||| ||||| ||| |||| ||| Sbjct 2427 AACAAGCTGGCGACCGTGTATGTGGAGGTGTTCCGCAACATTCCGCCACTGCTGCAAATC 2486 Query 121 CTGTTCTGGTA 131 ||||||||||| Sbjct 2487 CTGTTCTGGTA 2497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322798597720