Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq131474 484 1e-134 seq125899 430 2e-118 seq130631 412 6e-113 seq127193 412 6e-113 seq107718 412 6e-113 seq65048 412 6e-113 seq131001 329 6e-88 seq108866 322 8e-86 seq125775 183 5e-44 seq103434 176 8e-42 seq71553 159 6e-37 seq47496 159 6e-37 seq45966 104 4e-20 seq12316 80.6 5e-13 seq77801 78.8 2e-12 >seq131474 Length=103143 Score = 484 bits (536), Expect = 1e-134 Identities = 283/293 (97%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 41458 TACTAAGCGGAATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 41517 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41518 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 41577 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41578 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 41637 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 41638 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 41697 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 41698 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 41750 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 53495 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 53553 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 53554 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 53613 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 53614 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 53673 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 53674 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 53733 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 53734 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 53786 Score = 381 bits (422), Expect = 1e-103 Identities = 261/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| ||||||| |||| | | || ||||| |||| |||||| ||||||||||||| Sbjct 75948 TACTAAGTTGAATTACTATTGCGAC-ACTGTCATTAGTATGGTAAATCTAACCTGTCTCA 76006 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||| |||||||||| ||||| | ||||||||| || ||||||||||||||| || | || Sbjct 76007 TGATGGTCTAAACCTAGCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTCAGTGA 76066 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 76067 ATTTTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 76126 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 76127 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 76186 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 76187 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 76239 Score = 363 bits (402), Expect = 3e-98 Identities = 253/286 (88%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 28929 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 28987 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 28988 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 29047 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 29048 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAATGTCATTAT 29107 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||| ||||||||||||| || ||| |||||| | Sbjct 29108 GAACGCTTGGCTGCCACAAGCCAGTTATCATTGTGGTAACTTTTGTGACACGTCTAGCTT 29167 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286 |||||| || | |||||||||||||||| |||||||||||||| Sbjct 29168 CAAATTCTGAAAGTCTAAAGGATCGATAGGAAACACTTTCATGGTT 29213 Score = 349 bits (386), Expect = 6e-94 Identities = 254/293 (87%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||| |||| | || ||||||||||| |||||||||| ||||||| Sbjct 73827 TACTAGGTTGAATTAATATTGCCAC-ACTATCATCAGTAGGATAAAACTAACTTGTCTCA 73885 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || | |||||||| ||||||||||||||||| || ||||||||||||||| ||| | Sbjct 73886 CGATGATCTAAACCTAGCTCACGTTCCCTATTGGTCGGTGAACAATCCAACACTTGGTAA 73945 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||| |||||||||||| ||||||||||||||||| |||||||| Sbjct 73946 ATTCTGCTTCACAATGATAGAAAGAGCCGACATTGAAGGATCAAAAAGCAATGTCGCTAT 74005 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 74006 GAACGCTTGGCTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 74065 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 74066 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 74118 >seq125899 Length=55411 Score = 430 bits (476), Expect = 2e-118 Identities = 272/293 (93%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 30335 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 30277 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 30276 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 30217 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 30216 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 30157 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 30156 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 30097 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 30096 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 30044 Score = 185 bits (204), Expect = 1e-44 Identities = 114/122 (93%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 29797 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACAC 29738 Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291 ||||||| ||||||| ||| || |||||||||||||||||||| |||||| |||| |||| Sbjct 29737 CTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTAT 29678 Query 292 TC 293 || Sbjct 29677 TC 29676 >seq130631 Length=123029 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 97196 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 97254 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 97255 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 97314 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 97315 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 97374 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 97375 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 97434 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 97435 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 97487 Score = 363 bits (402), Expect = 3e-98 Identities = 259/295 (88%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | ||| |||| |||||||||||||||||||||||||||||| Sbjct 86484 TACTGAGCAGGATTTCTTTTGCAACGACAAGTCATCAGTAGGGTAAAACTAACCTGTCTC 86543 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 86544 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 86603 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86604 AACTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 86663 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 86664 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGAT 86723 Query 240 TCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | | |||||||||||||||| | ||||| ||| |||||| Sbjct 86724 TGAAACTCTCAATAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 86778 Score = 342 bits (378), Expect = 9e-92 Identities = 253/294 (86%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| ||||||| |||| | | || ||||| |||| |||||| ||||||||||||| Sbjct 46600 TACTAAGTTGAATTACTATTGCGAC-ACTGTCATTAGTATGGTAAATCTAACCTGTCTCA 46658 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || |||||||||||||||| | ||||||||| || ||||||||||||||| || | || Sbjct 46659 CGATGGTCTAAACCCAGCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTCAGTGA 46718 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||| ||||||||||| ||||||||||||||||||| || |||| ||| Sbjct 46719 ATTCTGCTTCACAATGGTAGGAAGAGCCTACATCGAAGGATCAAAAAGAAATGTCGTTAT 46778 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| | Sbjct 46779 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTGTGACACCTCTAGCTT 46838 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||||| || || ||||| ||| ||||||| |||||||||||||| | |||| Sbjct 46839 CAAATTCTGAAGGTCTAAACGATTGATAGGCAACACTTTCATGGTTCTTGTTCA 46892 >seq127193 Length=60659 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 8728 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 8670 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 8669 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 8610 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8609 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 8550 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 8549 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 8490 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 8489 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 8437 >seq107718 Length=26442 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 21189 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21131 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 21130 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21071 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21070 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21011 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 21010 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 20951 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 20950 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 20898 >seq65048 Length=5430 Score = 412 bits (456), Expect = 6e-113 Identities = 268/293 (91%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | || ||||||||||||||||||||||||||||||| Sbjct 3482 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3424 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 3423 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 3364 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3363 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3304 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 3303 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 3244 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| ||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 3243 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 3191 >seq131001 Length=88751 Score = 329 bits (364), Expect = 6e-88 Identities = 244/284 (86%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| |||| | | | ||||| |||| |||||||||||| ||| |||||||||||| Sbjct 9237 GAATTACTATTGCGACC-CTGTCATTAGTATGGTAAAACTAACTTGTTTCATGACGGTCT 9179 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||| ||| | ||||||||| || ||||||||||||||| ||| ||||||||||| Sbjct 9178 AAACCCACCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTTGGTGAATTCTGCTT 9119 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||| Sbjct 9118 CATAATGATAGGAAGAGTTGACATCTAAGGATCAAAAAGCAACTTCGCTATGAACGCTTA 9059 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||| |||||||||||| ||||||||||||||| ||||||| || ||||||| | Sbjct 9058 CATGCCACATGCCAGTTATCCCGGTGGTAACTTTTCTGACACCTCTTGCTTCAAATTATG 8999 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || ||||||||| || |||||||||||||||||||||||||| Sbjct 8998 AAGGTCTAAAGGATAGAAAGGCCACACTTTCATGGTTTGTATTC 8955 >seq108866 Length=51255 Score = 322 bits (356), Expect = 8e-86 Identities = 248/293 (85%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||| | | ||||| |||| |||||||||||| ||| ||| Sbjct 50900 TACTAGGTTGAATTACTATTGCAACC-CTGTCATTAGTATGGTAAAACTAACTTGTTTCA 50842 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | |||||||||||||| ||| | ||||||||| || ||||||||||||||| ||| || Sbjct 50841 TAACGGTCTAAACCCACCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTTGGTGA 50782 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 | ||| |||| |||||||||||||| |||||| ||||||||||||||||| ||||||| Sbjct 50781 AATCTACTTCACAATGATAGGAAGAGCTGACATCTAAGGATCAAAAAGCAACTTCGCTAT 50722 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||| ||||||| |||||||||||||||||||||||||||| ||||||| || | Sbjct 50721 GAACGCTTACATGCCACATGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTT 50662 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| || || ||||||||| ||||||||||||||||| ||||||||||| Sbjct 50661 CAAATTATGAAGGTCTAAAGGATAGATAGGCCACACTTTCAAGGTTTGTATTC 50609 >seq125775 Length=54816 Score = 183 bits (202), Expect = 5e-44 Identities = 190/248 (77%), Gaps = 7/248 (3%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| || ||||||| |||| | || ||||| | ||| |||||| |||| ||||||| Sbjct 33258 TACTTAGTTGAATTACTATTGCAAC-ACTGTCATTATTAGAGTAAAATTAACTTGTCTCA 33316 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || ||||| || ||||||||||||||||| || ||||||||| ||||| ||| | Sbjct 33317 CAACCATCTAAGCCTAGCTCACGTTCCCTATTGGTAGGTGAACAAGCCAACTCTTGGTGT 33376 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| ||||||||| || | ||||||| ||||| ||||||| |||| Sbjct 33377 ATTTTGCTTCACAGTGATAGGAA------ACGTTGAAGGATAAAAAACCAACGTCACTAT 33430 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||| | |||| |||||||||||| || || | ||| ||| |||| | ||||||||| | Sbjct 33431 GAATGATTGGTTGCCACAAGCCAATTGTCTCCGTGATAATTTTTTTAATACCTCTAGCTT 33490 Query 241 CAAATTTC 248 |||||||| Sbjct 33491 CAAATTTC 33498 >seq103434 Length=22906 Score = 176 bits (194), Expect = 8e-42 Identities = 172/222 (77%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 || ||||| | ||| |||||| |||| ||||||| || |||||||| ||||||||||| Sbjct 8452 ACTGTCATTATTAGAGTAAAATTAACTTGTCTCACAACCATCTAAACCTAGCTCACGTTC 8511 Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 |||||| || ||||||||| ||||| ||| | ||| |||||| ||||||||| Sbjct 8512 CCTATTGGTAGGTGAACAAGCCAACTCTTGGTGTATTTTGCTTCACAGTGATAGGAA--- 8568 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 || | ||||| | ||||| ||||||| ||||||| | |||| |||||||||||| || Sbjct 8569 ---ACGTTGAAGGGTAAAAAACCAACGTCACTATGAATGATTGGTTGCCACAAGCCAATT 8625 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248 || | ||| ||| |||| | ||||||||| ||||||||| Sbjct 8626 GTCTCGGTGATAATTTTTTTAATACCTCTAGCTTCAAATTTC 8667 >seq71553 Length=7450 Score = 159 bits (176), Expect = 6e-37 Identities = 146/183 (80%), Gaps = 5/183 (3%) Strand=Plus/Minus Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 ||||||| ||| ||||| || ||| ||||||||||| | | || |||||||||| Sbjct 6774 ATCCAACACTTGGTGAATTATGTTTCACAATGATAGGAAGTTGCAATATAGAAGGATCAA 6715 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct 6714 AAAGCAACGTTGCTATGAACGTTTGGCTGCCACAAGCCAGTTATCAGTGTGGTAACTAAT 6655 Query 225 CTG-GCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 || || ||| ||||||| || || ||||||||||||||||||| ||||||| Sbjct 6654 TTGATGACATCT----TCAAATTATGAAGGTCTAAAGGATCGATAGGCCATGCTTTCATA 6599 Query 284 GTT 286 ||| Sbjct 6598 GTT 6596 >seq47496 Length=2974 Score = 159 bits (176), Expect = 6e-37 Identities = 146/183 (80%), Gaps = 5/183 (3%) Strand=Plus/Plus Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164 ||||||| ||| ||||| || ||| ||||||||||| | | || |||||||||| Sbjct 1408 ATCCAACACTTGGTGAATTATGTTTCACAATGATAGGAAGTTGCAATATAGAAGGATCAA 1467 Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 |||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct 1468 AAAGCAACGTTGCTATGAACGTTTGGCTGCCACAAGCCAGTTATCAGTGTGGTAACTAAT 1527 Query 225 CTG-GCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 || || ||| ||||||| || || ||||||||||||||||||| ||||||| Sbjct 1528 TTGATGACATCT----TCAAATTATGAAGGTCTAAAGGATCGATAGGCCATGCTTTCATA 1583 Query 284 GTT 286 ||| Sbjct 1584 GTT 1586 >seq45966 Length=2893 Score = 104 bits (114), Expect = 4e-20 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2834 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 2893 >seq12316 Length=1162 Score = 80.6 bits (88), Expect = 5e-13 Identities = 126/177 (71%), Gaps = 10/177 (6%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 543 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 484 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | | | || | | ||| || ||||||||||||| | |||| Sbjct 483 CTTGGAACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCTT 427 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| || | | |||| |||||||| | |||| ||||| Sbjct 426 GCCGTCGATATGGACTCTTGG--GCAAGATCAGCCTGTTATCCCCGAGGTACCTTTT 372 >seq77801 Length=9883 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| || ||||| | || Sbjct 2839 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 2780 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| |||| ||| || | | ||| || ||||||||||||| | |||| | | Sbjct 2779 CTTGGGACCGGCTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 2723 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||||| ||||| | | |||| |||||||| | ||| ||||| Sbjct 2722 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 2668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853268125056