Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq131474 484 1e-134
seq125899 430 2e-118
seq130631 412 6e-113
seq127193 412 6e-113
seq107718 412 6e-113
seq65048 412 6e-113
seq131001 329 6e-88
seq108866 322 8e-86
seq125775 183 5e-44
seq103434 176 8e-42
seq71553 159 6e-37
seq47496 159 6e-37
seq45966 104 4e-20
seq12316 80.6 5e-13
seq77801 78.8 2e-12
>seq131474
Length=103143
Score = 484 bits (536), Expect = 1e-134
Identities = 283/293 (97%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 41458 TACTAAGCGGAATTACCATTGGGACGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 41517
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 41518 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 41577
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 41578 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 41637
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 41638 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 41697
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 41698 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 41750
Score = 412 bits (456), Expect = 6e-113
Identities = 268/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 53495 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 53553
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 53554 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 53613
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53614 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 53673
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 53674 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 53733
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 53734 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 53786
Score = 381 bits (422), Expect = 1e-103
Identities = 261/293 (89%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| ||||||| |||| | | || ||||| |||| |||||| |||||||||||||
Sbjct 75948 TACTAAGTTGAATTACTATTGCGAC-ACTGTCATTAGTATGGTAAATCTAACCTGTCTCA 76006
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||| |||||||||| ||||| | ||||||||| || ||||||||||||||| || | ||
Sbjct 76007 TGATGGTCTAAACCTAGCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTCAGTGA 76066
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 76067 ATTTTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 76126
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 76127 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 76186
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 76187 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 76239
Score = 363 bits (402), Expect = 3e-98
Identities = 253/286 (88%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 28929 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 28987
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 28988 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 29047
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 29048 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAATGTCATTAT 29107
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||| ||||||||||||| || ||| |||||| |
Sbjct 29108 GAACGCTTGGCTGCCACAAGCCAGTTATCATTGTGGTAACTTTTGTGACACGTCTAGCTT 29167
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286
|||||| || | |||||||||||||||| ||||||||||||||
Sbjct 29168 CAAATTCTGAAAGTCTAAAGGATCGATAGGAAACACTTTCATGGTT 29213
Score = 349 bits (386), Expect = 6e-94
Identities = 254/293 (87%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | |||||| |||| | || ||||||||||| |||||||||| |||||||
Sbjct 73827 TACTAGGTTGAATTAATATTGCCAC-ACTATCATCAGTAGGATAAAACTAACTTGTCTCA 73885
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|| | |||||||| ||||||||||||||||| || ||||||||||||||| ||| |
Sbjct 73886 CGATGATCTAAACCTAGCTCACGTTCCCTATTGGTCGGTGAACAATCCAACACTTGGTAA 73945
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||
Sbjct 73946 ATTCTGCTTCACAATGATAGAAAGAGCCGACATTGAAGGATCAAAAAGCAATGTCGCTAT 74005
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 74006 GAACGCTTGGCTACCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 74065
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 74066 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 74118
>seq125899
Length=55411
Score = 430 bits (476), Expect = 2e-118
Identities = 272/293 (93%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||
Sbjct 30335 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 30277
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 30276 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 30217
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30216 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 30157
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 30156 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 30097
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 30096 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 30044
Score = 185 bits (204), Expect = 1e-44
Identities = 114/122 (93%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 172 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCAC 231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 29797 CGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACAC 29738
Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291
||||||| ||||||| ||| || |||||||||||||||||||| |||||| |||| ||||
Sbjct 29737 CTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTAT 29678
Query 292 TC 293
||
Sbjct 29677 TC 29676
>seq130631
Length=123029
Score = 412 bits (456), Expect = 6e-113
Identities = 268/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 97196 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 97254
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 97255 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 97314
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 97315 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 97374
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 97375 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 97434
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 97435 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 97487
Score = 363 bits (402), Expect = 3e-98
Identities = 259/295 (88%), Gaps = 2/295 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||| | ||| |||| ||||||||||||||||||||||||||||||
Sbjct 86484 TACTGAGCAGGATTTCTTTTGCAACGACAAGTCATCAGTAGGGTAAAACTAACCTGTCTC 86543
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 86544 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 86603
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 86604 AACTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 86663
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 86664 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGAT 86723
Query 240 TCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | | |||||||||||||||| | ||||| ||| ||||||
Sbjct 86724 TGAAACTCTCAATAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 86778
Score = 342 bits (378), Expect = 9e-92
Identities = 253/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||||| ||||||| |||| | | || ||||| |||| |||||| |||||||||||||
Sbjct 46600 TACTAAGTTGAATTACTATTGCGAC-ACTGTCATTAGTATGGTAAATCTAACCTGTCTCA 46658
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|| |||||||||||||||| | ||||||||| || ||||||||||||||| || | ||
Sbjct 46659 CGATGGTCTAAACCCAGCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTCAGTGA 46718
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| ||| ||||||||||| ||||||||||||||||||| || |||| |||
Sbjct 46719 ATTCTGCTTCACAATGGTAGGAAGAGCCTACATCGAAGGATCAAAAAGAAATGTCGTTAT 46778
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
Sbjct 46779 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTGTGACACCTCTAGCTT 46838
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
|||||| || || ||||| ||| ||||||| |||||||||||||| | ||||
Sbjct 46839 CAAATTCTGAAGGTCTAAACGATTGATAGGCAACACTTTCATGGTTCTTGTTCA 46892
>seq127193
Length=60659
Score = 412 bits (456), Expect = 6e-113
Identities = 268/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 8728 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 8670
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 8669 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 8610
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8609 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 8550
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 8549 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 8490
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 8489 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 8437
>seq107718
Length=26442
Score = 412 bits (456), Expect = 6e-113
Identities = 268/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 21189 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 21131
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 21130 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 21071
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21070 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 21011
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 21010 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 20951
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 20950 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 20898
>seq65048
Length=5430
Score = 412 bits (456), Expect = 6e-113
Identities = 268/293 (91%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | || |||||||||||||||||||||||||||||||
Sbjct 3482 TACTAGGTTGAATTACTATTGCGAC-ACTGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3424
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||
Sbjct 3423 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 3364
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3363 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3304
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 3303 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 3244
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| ||| || |||||||||||||||||||| |||||| |||| ||||||
Sbjct 3243 CAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 3191
>seq131001
Length=88751
Score = 329 bits (364), Expect = 6e-88
Identities = 244/284 (86%), Gaps = 1/284 (0%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
||||||| |||| | | | ||||| |||| |||||||||||| ||| ||||||||||||
Sbjct 9237 GAATTACTATTGCGACC-CTGTCATTAGTATGGTAAAACTAACTTGTTTCATGACGGTCT 9179
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||| ||| | ||||||||| || ||||||||||||||| ||| |||||||||||
Sbjct 9178 AAACCCACCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTTGGTGAATTCTGCTT 9119
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
| ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||
Sbjct 9118 CATAATGATAGGAAGAGTTGACATCTAAGGATCAAAAAGCAACTTCGCTATGAACGCTTA 9059
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||| |||||||||||| ||||||||||||||| ||||||| || ||||||| |
Sbjct 9058 CATGCCACATGCCAGTTATCCCGGTGGTAACTTTTCTGACACCTCTTGCTTCAAATTATG 8999
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| || ||||||||| || ||||||||||||||||||||||||||
Sbjct 8998 AAGGTCTAAAGGATAGAAAGGCCACACTTTCATGGTTTGTATTC 8955
>seq108866
Length=51255
Score = 322 bits (356), Expect = 8e-86
Identities = 248/293 (85%), Gaps = 1/293 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| |||| | | ||||| |||| |||||||||||| ||| |||
Sbjct 50900 TACTAGGTTGAATTACTATTGCAACC-CTGTCATTAGTATGGTAAAACTAACTTGTTTCA 50842
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
| |||||||||||||| ||| | ||||||||| || ||||||||||||||| ||| ||
Sbjct 50841 TAACGGTCTAAACCCACCTCGCATTCCCTATTGGTTGGTGAACAATCCAACACTTGGTGA 50782
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
| ||| |||| |||||||||||||| |||||| ||||||||||||||||| |||||||
Sbjct 50781 AATCTACTTCACAATGATAGGAAGAGCTGACATCTAAGGATCAAAAAGCAACTTCGCTAT 50722
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||||||| ||||||| |||||||||||||||||||||||||||| ||||||| || |
Sbjct 50721 GAACGCTTACATGCCACATGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTT 50662
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
|||||| || || ||||||||| ||||||||||||||||| |||||||||||
Sbjct 50661 CAAATTATGAAGGTCTAAAGGATAGATAGGCCACACTTTCAAGGTTTGTATTC 50609
>seq125775
Length=54816
Score = 183 bits (202), Expect = 5e-44
Identities = 190/248 (77%), Gaps = 7/248 (3%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||| || ||||||| |||| | || ||||| | ||| |||||| |||| |||||||
Sbjct 33258 TACTTAGTTGAATTACTATTGCAAC-ACTGTCATTATTAGAGTAAAATTAACTTGTCTCA 33316
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|| ||||| || ||||||||||||||||| || ||||||||| ||||| ||| |
Sbjct 33317 CAACCATCTAAGCCTAGCTCACGTTCCCTATTGGTAGGTGAACAAGCCAACTCTTGGTGT 33376
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||| |||||| ||||||||| || | ||||||| ||||| ||||||| ||||
Sbjct 33377 ATTTTGCTTCACAGTGATAGGAA------ACGTTGAAGGATAAAAAACCAACGTCACTAT 33430
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||| | |||| |||||||||||| || || | ||| ||| |||| | ||||||||| |
Sbjct 33431 GAATGATTGGTTGCCACAAGCCAATTGTCTCCGTGATAATTTTTTTAATACCTCTAGCTT 33490
Query 241 CAAATTTC 248
||||||||
Sbjct 33491 CAAATTTC 33498
>seq103434
Length=22906
Score = 176 bits (194), Expect = 8e-42
Identities = 172/222 (77%), Gaps = 6/222 (3%)
Strand=Plus/Plus
Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86
|| ||||| | ||| |||||| |||| ||||||| || |||||||| |||||||||||
Sbjct 8452 ACTGTCATTATTAGAGTAAAATTAACTTGTCTCACAACCATCTAAACCTAGCTCACGTTC 8511
Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
|||||| || ||||||||| ||||| ||| | ||| |||||| |||||||||
Sbjct 8512 CCTATTGGTAGGTGAACAAGCCAACTCTTGGTGTATTTTGCTTCACAGTGATAGGAA--- 8568
Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|| | ||||| | ||||| ||||||| ||||||| | |||| |||||||||||| ||
Sbjct 8569 ---ACGTTGAAGGGTAAAAAACCAACGTCACTATGAATGATTGGTTGCCACAAGCCAATT 8625
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248
|| | ||| ||| |||| | ||||||||| |||||||||
Sbjct 8626 GTCTCGGTGATAATTTTTTTAATACCTCTAGCTTCAAATTTC 8667
>seq71553
Length=7450
Score = 159 bits (176), Expect = 6e-37
Identities = 146/183 (80%), Gaps = 5/183 (3%)
Strand=Plus/Minus
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
||||||| ||| ||||| || ||| ||||||||||| | | || ||||||||||
Sbjct 6774 ATCCAACACTTGGTGAATTATGTTTCACAATGATAGGAAGTTGCAATATAGAAGGATCAA 6715
Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
|||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |
Sbjct 6714 AAAGCAACGTTGCTATGAACGTTTGGCTGCCACAAGCCAGTTATCAGTGTGGTAACTAAT 6655
Query 225 CTG-GCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283
|| || ||| ||||||| || || ||||||||||||||||||| |||||||
Sbjct 6654 TTGATGACATCT----TCAAATTATGAAGGTCTAAAGGATCGATAGGCCATGCTTTCATA 6599
Query 284 GTT 286
|||
Sbjct 6598 GTT 6596
>seq47496
Length=2974
Score = 159 bits (176), Expect = 6e-37
Identities = 146/183 (80%), Gaps = 5/183 (3%)
Strand=Plus/Plus
Query 105 ATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAA 164
||||||| ||| ||||| || ||| ||||||||||| | | || ||||||||||
Sbjct 1408 ATCCAACACTTGGTGAATTATGTTTCACAATGATAGGAAGTTGCAATATAGAAGGATCAA 1467
Query 165 AAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
|||||||||| |||||||||| ||||||||||||||||||||||| |||||||||| |
Sbjct 1468 AAAGCAACGTTGCTATGAACGTTTGGCTGCCACAAGCCAGTTATCAGTGTGGTAACTAAT 1527
Query 225 CTG-GCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283
|| || ||| ||||||| || || ||||||||||||||||||| |||||||
Sbjct 1528 TTGATGACATCT----TCAAATTATGAAGGTCTAAAGGATCGATAGGCCATGCTTTCATA 1583
Query 284 GTT 286
|||
Sbjct 1584 GTT 1586
>seq45966
Length=2893
Score = 104 bits (114), Expect = 4e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2834 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 2893
>seq12316
Length=1162
Score = 80.6 bits (88), Expect = 5e-13
Identities = 126/177 (71%), Gaps = 10/177 (6%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| |||||||||||||| ||| || ||| |||| ||||| |||||
Sbjct 543 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 484
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| | | | || | | ||| || ||||||||||||| | ||||
Sbjct 483 CTTGGAACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCTT 427
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224
||||| |||| || ||||| || | | |||| |||||||| | |||| |||||
Sbjct 426 GCCGTCGATATGGACTCTTGG--GCAAGATCAGCCTGTTATCCCCGAGGTACCTTTT 372
>seq77801
Length=9883
Score = 78.8 bits (86), Expect = 2e-12
Identities = 123/175 (70%), Gaps = 6/175 (3%)
Strand=Plus/Minus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| |||||||||||||| ||| || ||| || ||||| | ||
Sbjct 2839 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACC 2780
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| |||| ||| || | | ||| || ||||||||||||| | |||| | |
Sbjct 2779 CTTGGGACCGGCTTCAGCCCCAGGATGT---GATGAGCCGACATCGAGGTGCCAAACACC 2723
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| ||||||| ||||| | | |||| |||||||| | ||| |||||
Sbjct 2722 GCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTT 2668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853268125056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |