Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001187.1
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
seq53579 260 2e-67
>seq53579
Length=3412
Score = 260 bits (288), Expect = 2e-67
Identities = 182/207 (88%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 55 GCGACGATTTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTGACGCCGCCGACGGCCTGC 114
|| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 3412 GCAACGATTTCCTGGCCGGTGTAGCAGCCTTTCTTGAAGCTTACGCCGCCAACGGCCTGC 3353
Query 115 AGGTTGAGCATTTGCGGGATGAACAGCTCGCGGGTTTGCGCCATGACCTGGCCGATGCCG 174
||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 3352 AGGTTGAGCATCTGCGGGATAAACAGCTCGCGGGTTTGCGGCATGACCTGGCCGATGCCT 3293
Query 175 GCGCGGGTCTGGCCCAGCAGCCATTCGTTCAGACCTGCTTCTTTAAGCTGTGCAGTCAAT 234
|||||| | || |||||||||||||| |||||| | |||| || ||| ||||| ||||
Sbjct 3292 GCGCGGATTTGCCCCAGCAGCCATTCATTCAGATCGGCTTGTTCAAGGGTTGCAGCCAAT 3233
Query 235 TGGCTGCGTACGGCCTCGGCCTGTTCG 261
|| ||||||| ||| ||| | || |||
Sbjct 3232 TGACTGCGTATGGCGTCGCCTTGCTCG 3206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 735055446120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |