Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20
2014-12-22] 132,476 sequences; 2,049,208,583 total letters
Query= AAMG01001212.1
Length=311
Score E
Sequences producing significant alignments: (Bits) Value
seq28725 462 4e-128
>seq28725
Length=2081
Score = 462 bits (512), Expect = 4e-128
Identities = 289/311 (93%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 1 TCGAGCTGTATTTTTTCACCCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 TCGAGCTGTATTTTTTCACCCGCGTTTCTGGCTGTTATGGCTGGGGCTCGGCCTGCTGTG 879
Query 61 GCTGGTCACCCAGTTGCCCTACCGTGCGCTGTTGACCATTGGTCGCCTGCTGGGTGCGGG 120
|||||||||||| |||||||||| |||||| ||||||||||||| |||||||| || ||
Sbjct 878 GCTGGTCACCCAACTGCCCTACCGCGCGCTGCTGACCATTGGTCGGCTGCTGGGCGCCGG 819
Query 121 GATGTACCGTGTGGCCGGCGAACGCCGCCGCATCGCCGCGCGAAACCTGGAACTGTGCTT 180
|||||||| ||||||||||| || |||||||||||||| || |||||||||||||||||
Sbjct 818 CATGTACCGCGTGGCCGGCGAGCGTCGCCGCATCGCCGCACGCAACCTGGAACTGTGCTT 759
Query 181 CCCGGAAAAATCCGCGAAAGAGCGTAAACATTTGCTTAAAGAAAACTTTGCCTCCACCGG 240
||||||||||||||| ||||||| ||||| ||||| || ||||||||||||||||||||
Sbjct 758 CCCGGAAAAATCCGCCCAAGAGCGCAAACACTTGCTCAAGGAAAACTTTGCCTCCACCGG 699
Query 241 CATCGCCTTCTTTGAGATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGCCT 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 698 CATCGCCTTCTTTGAAATGGCCATGAGCTGGTGGTGGTCGCGCCAGCGCCTGGCGCGGCT 639
Query 301 GGCCCACGTCG 311
|||||| ||||
Sbjct 638 GGCCCATGTCG 628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 891617254272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |