Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Humulus_20lupulus_20var._20lupulus_20[genbank_20GCA_5F000831365.1_20 2014-12-22] 132,476 sequences; 2,049,208,583 total letters Query= AAMG01001250.1 Length=167 Score E Sequences producing significant alignments: (Bits) Value seq65509 167 2e-39 >seq65509 Length=5515 Score = 167 bits (184), Expect = 2e-39 Identities = 136/160 (85%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 1 TCGACCCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGG 60 ||||||| ||||||||||||||||| ||||| ||||| ||||| |||||| ||||||| | Sbjct 2830 TCGACCCCAACCTGTGCACCCAGTGTGTCGGCCACTATGACGAGCCGCAGTGCCAGCAAG 2771 Query 61 TATCGCCCGGTGGATTCGCATTTCCGCTGGACGAGGCACACCCCGAGACGGAAGAGCAGT 120 | | |||||||||||| ||| | |||||||| || || || || ||||||||||||||| Sbjct 2770 TGT-GCCCGGTGGATT-GCA-TCCCGCTGGATGAAGCCCATCCGGAGACGGAAGAGCAG- 2715 Query 121 TTGATGGAGAAGTACCGCAAGATTACCGGTAAGGCCTAAG 160 ||||||| |||||||| ||||||||||||||||| || Sbjct 2714 TTGATGGCCAAGTACCGGTTGATTACCGGTAAGGCCTGAG 2675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434641481184